RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 WASHC2CQ9Y4E1 1318 aa19.65■□□□□ 0.74
PHF1-210ENST00000488767 ZMYM3Q14202 1370 aa19.64■□□□□ 0.73
PHF1-210ENST00000488767 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
PHF1-210ENST00000488767 KDM5DQ9BY66 1539 aa19.63■□□□□ 0.73
PHF1-210ENST00000488767 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
PHF1-210ENST00000488767 NCOA1Q15788 1441 aa19.62■□□□□ 0.73
PHF1-210ENST00000488767 C3P01024 1663 aa19.62■□□□□ 0.73
PHF1-210ENST00000488767 ITGAEP38570 1179 aa19.61■□□□□ 0.73
PHF1-210ENST00000488767 RNF17Q9BXT8 1623 aaKnown RBP19.6■□□□□ 0.73
PHF1-210ENST00000488767 NPATQ14207 1427 aa19.59■□□□□ 0.73
PHF1-210ENST00000488767 UHRF1BP1Q6BDS2 1440 aa19.59■□□□□ 0.73
PHF1-210ENST00000488767 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
PHF1-210ENST00000488767 KANK1Q14678 1352 aa19.58■□□□□ 0.73
PHF1-210ENST00000488767 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
PHF1-210ENST00000488767 PREX1Q8TCU6 1659 aa19.57■□□□□ 0.72
PHF1-210ENST00000488767 LMTK3Q96Q04 1460 aa19.57■□□□□ 0.72
PHF1-210ENST00000488767 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
PHF1-210ENST00000488767 ANKRD50Q9ULJ7 1429 aa19.55■□□□□ 0.72
PHF1-210ENST00000488767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
PHF1-210ENST00000488767 PTPRKQ15262 1439 aa19.52■□□□□ 0.72
PHF1-210ENST00000488767 ABCC3O15438 1527 aa19.52■□□□□ 0.72
PHF1-210ENST00000488767 PRDM15P57071 1507 aaPredicted RBP19.52■□□□□ 0.72
PHF1-210ENST00000488767 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.72
PHF1-210ENST00000488767 PZPP20742 1482 aa19.51■□□□□ 0.71
PHF1-210ENST00000488767 DEPDC5O75140 1603 aa19.49■□□□□ 0.71
PHF1-210ENST00000488767 MROH1Q8NDA8 1641 aa19.49■□□□□ 0.71
PHF1-210ENST00000488767 HSPA2P54652 639 aa19.48■□□□□ 0.71
PHF1-210ENST00000488767 TNRQ92752 1358 aa19.46■□□□□ 0.71
PHF1-210ENST00000488767 CAMSAP1Q5T5Y3 1602 aa19.44■□□□□ 0.7
PHF1-210ENST00000488767 MYO3AQ8NEV4 1616 aa19.44■□□□□ 0.7
PHF1-210ENST00000488767 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
PHF1-210ENST00000488767 CEP152O94986 1710 aa19.44■□□□□ 0.7
PHF1-210ENST00000488767 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
PHF1-210ENST00000488767 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
PHF1-210ENST00000488767 NLRP1Q9C000 1473 aa19.41■□□□□ 0.7
PHF1-210ENST00000488767 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
PHF1-210ENST00000488767 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
PHF1-210ENST00000488767 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
PHF1-210ENST00000488767 A2ML1A8K2U0 1454 aa19.39■□□□□ 0.69
PHF1-210ENST00000488767 ERVK-7P63135 1459 aa19.39■□□□□ 0.69
PHF1-210ENST00000488767 ZNF142P52746 1687 aaPredicted RBP19.39■□□□□ 0.69
PHF1-210ENST00000488767 UNC13BO14795 1591 aa19.38■□□□□ 0.69
PHF1-210ENST00000488767 SPATA31D1Q6ZQQ2 1576 aa19.38■□□□□ 0.69
PHF1-210ENST00000488767 EFCAB6Q5THR3 1501 aa19.36■□□□□ 0.69
PHF1-210ENST00000488767 NUP155O75694 1391 aa19.36■□□□□ 0.69
PHF1-210ENST00000488767 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
PHF1-210ENST00000488767 THEMISQ8N1K5 641 aaPredicted RBP19.35■□□□□ 0.69
PHF1-210ENST00000488767 NAIPQ13075 1403 aa19.34■□□□□ 0.69
PHF1-210ENST00000488767 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
PHF1-210ENST00000488767 RPRD2Q5VT52 1461 aaKnown RBP19.34■□□□□ 0.69
PHF1-210ENST00000488767 TET3O43151 1660 aa19.33■□□□□ 0.68
PHF1-210ENST00000488767 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
PHF1-210ENST00000488767 PLA2R1Q13018 1463 aa19.32■□□□□ 0.68
PHF1-210ENST00000488767 PKD2Q13563 968 aa19.31■□□□□ 0.68
PHF1-210ENST00000488767 STAG3Q9UJ98 1225 aa19.31■□□□□ 0.68
PHF1-210ENST00000488767 IQGAP3Q86VI3 1631 aa19.31■□□□□ 0.68
PHF1-210ENST00000488767 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
PHF1-210ENST00000488767 ACIN1Q9UKV3 1341 aaKnown RBP19.27■□□□□ 0.68
PHF1-210ENST00000488767 CFAP65Q6ZU64 1925 aaKnown RBP19.27■□□□□ 0.68
PHF1-210ENST00000488767 SLC52A1Q9NWF4 448 aa19.27■□□□□ 0.68
PHF1-210ENST00000488767 PTPRTO14522 1441 aa19.26■□□□□ 0.67
PHF1-210ENST00000488767 ANKLE2Q86XL3 938 aa19.26■□□□□ 0.67
PHF1-210ENST00000488767 STRCQ7RTU9 1775 aa19.26■□□□□ 0.67
PHF1-210ENST00000488767 NCKAP5LQ9HCH0 1330 aa19.25■□□□□ 0.67
PHF1-210ENST00000488767 NOS1P29475 1434 aa19.25■□□□□ 0.67
PHF1-210ENST00000488767 SYNMO15061 1565 aa19.21■□□□□ 0.67
PHF1-210ENST00000488767 IDI1Q13907 227 aa19.21■□□□□ 0.67
PHF1-210ENST00000488767 EID1Q9Y6B2 187 aa19.21■□□□□ 0.67
PHF1-210ENST00000488767 E9PCH4 1651 aa19.2■□□□□ 0.66
PHF1-210ENST00000488767 UBR1Q8IWV7 1749 aa19.2■□□□□ 0.66
PHF1-210ENST00000488767 PIK3C2BO00750 1634 aa19.19■□□□□ 0.66
PHF1-210ENST00000488767 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
PHF1-210ENST00000488767 POLR1AO95602 1720 aaPredicted RBP19.19■□□□□ 0.66
PHF1-210ENST00000488767 SETD5Q9C0A6 1442 aa19.18■□□□□ 0.66
PHF1-210ENST00000488767 KDM5AP29375 1690 aaKnown RBP19.18■□□□□ 0.66
PHF1-210ENST00000488767 ADGRB3O60242 1522 aa19.17■□□□□ 0.66
PHF1-210ENST00000488767 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
PHF1-210ENST00000488767 HDGFP51858 240 aaKnown RBP19.16■□□□□ 0.66
PHF1-210ENST00000488767 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
PHF1-210ENST00000488767 TMEM2Q9UHN6 1383 aa19.15■□□□□ 0.66
PHF1-210ENST00000488767 NPHP4O75161 1426 aaPredicted RBP19.15■□□□□ 0.66
PHF1-210ENST00000488767 SLIT1O75093 1534 aa19.15■□□□□ 0.66
PHF1-210ENST00000488767 SCAF11Q99590 1463 aaKnown RBP19.14■□□□□ 0.65
PHF1-210ENST00000488767 MED14O60244 1454 aa19.13■□□□□ 0.65
PHF1-210ENST00000488767 ARHGAP23Q9P227 1491 aa19.12■□□□□ 0.65
PHF1-210ENST00000488767 HRCP23327 699 aa19.12■□□□□ 0.65
PHF1-210ENST00000488767 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
PHF1-210ENST00000488767 NEURL4Q96JN8 1562 aa19.11■□□□□ 0.65
PHF1-210ENST00000488767 PPP1R15AO75807 674 aaPredicted RBP19.11■□□□□ 0.65
PHF1-210ENST00000488767 RAB3GAP2Q9H2M9 1393 aa19.09■□□□□ 0.65
PHF1-210ENST00000488767 IQGAP1P46940 1657 aa19.09■□□□□ 0.65
PHF1-210ENST00000488767 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.09■□□□□ 0.65
PHF1-210ENST00000488767 TRPM2O94759 1503 aa19.09■□□□□ 0.65
PHF1-210ENST00000488767 CERKQ8TCT0 537 aa19.08■□□□□ 0.64
PHF1-210ENST00000488767 BCANQ96GW7 911 aa19.08■□□□□ 0.64
PHF1-210ENST00000488767 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.64
PHF1-210ENST00000488767 LTKP29376 864 aa19.07■□□□□ 0.64
PHF1-210ENST00000488767 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
PHF1-210ENST00000488767 ZNF335Q9H4Z2 1342 aaPredicted RBP19.06■□□□□ 0.64
PHF1-210ENST00000488767 ZNF326Q5BKZ1 582 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms