RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 ASXL2Q76L83 1435 aa8.79□□□□□ -1
PSME4-209ENST00000488687 ANKRD50Q9ULJ7 1429 aa8.79□□□□□ -1
PSME4-209ENST00000488687 CCDC141Q6ZP82 1450 aa8.79□□□□□ -1
PSME4-209ENST00000488687 ARHGEF5Q12774 1597 aa8.79□□□□□ -1
PSME4-209ENST00000488687 PLCB2Q00722 1185 aa8.79□□□□□ -1
PSME4-209ENST00000488687 EFCAB2Q5VUJ9 269 aa8.78□□□□□ -1
PSME4-209ENST00000488687 PLEKHH2Q8IVE3 1493 aa8.77□□□□□ -1
PSME4-209ENST00000488687 IFNLR1Q8IU57 520 aaPredicted RBP8.77□□□□□ -1
PSME4-209ENST00000488687 SYCP2Q9BX26 1530 aa8.77□□□□□ -1.01
PSME4-209ENST00000488687 KIF15Q9NS87 1388 aa8.77□□□□□ -1.01
PSME4-209ENST00000488687 MAP3K4Q9Y6R4 1608 aa8.77□□□□□ -1.01
PSME4-209ENST00000488687 MBD5Q9P267 1494 aa8.77□□□□□ -1.01
PSME4-209ENST00000488687 PLCH2O75038 1416 aa8.76□□□□□ -1.01
PSME4-209ENST00000488687 DENND4BO75064 1496 aaPredicted RBP8.76□□□□□ -1.01
PSME4-209ENST00000488687 WDR7Q9Y4E6 1490 aa8.75□□□□□ -1.01
PSME4-209ENST00000488687 NUP155O75694 1391 aa8.75□□□□□ -1.01
PSME4-209ENST00000488687 ADGRL1O94910 1474 aa8.75□□□□□ -1.01
PSME4-209ENST00000488687 VASPP50552 380 aaPredicted RBP8.74□□□□□ -1.01
PSME4-209ENST00000488687 MIER1Q8N108 512 aa8.74□□□□□ -1.01
PSME4-209ENST00000488687 KIAA1107Q9UPP5 1409 aa8.74□□□□□ -1.01
PSME4-209ENST00000488687 PKD2Q13563 968 aa8.74□□□□□ -1.01
PSME4-209ENST00000488687 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
PSME4-209ENST00000488687 ANKRD30BQ9BXX2 1392 aa8.74□□□□□ -1.01
PSME4-209ENST00000488687 PZPP20742 1482 aa8.73□□□□□ -1.01
PSME4-209ENST00000488687 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
PSME4-209ENST00000488687 COL17A1Q9UMD9 1497 aaPredicted RBP8.73□□□□□ -1.01
PSME4-209ENST00000488687 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
PSME4-209ENST00000488687 MYT1LQ9UL68 1186 aa8.72□□□□□ -1.01
PSME4-209ENST00000488687 L3MBTL2Q969R5 705 aa8.72□□□□□ -1.01
PSME4-209ENST00000488687 HIRIP3Q9BW71 556 aaPredicted RBP8.72□□□□□ -1.01
PSME4-209ENST00000488687 MAST1Q9Y2H9 1570 aa8.71□□□□□ -1.02
PSME4-209ENST00000488687 RPRD2Q5VT52 1461 aaKnown RBP8.71□□□□□ -1.02
PSME4-209ENST00000488687 TEX14Q8IWB6 1497 aa8.7□□□□□ -1.02
PSME4-209ENST00000488687 ABCC1P33527 1531 aa8.7□□□□□ -1.02
PSME4-209ENST00000488687 SPAG9O60271 1321 aaKnown RBP8.7□□□□□ -1.02
PSME4-209ENST00000488687 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
PSME4-209ENST00000488687 ARHGEF12Q9NZN5 1544 aa8.7□□□□□ -1.02
PSME4-209ENST00000488687 FANCAO15360 1455 aa8.69□□□□□ -1.02
PSME4-209ENST00000488687 CENPBP07199 599 aaPredicted RBP8.69□□□□□ -1.02
PSME4-209ENST00000488687 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
PSME4-209ENST00000488687 PLXNC1O60486 1568 aa8.69□□□□□ -1.02
PSME4-209ENST00000488687 YTHDC1Q96MU7 727 aaKnown RBP8.69□□□□□ -1.02
PSME4-209ENST00000488687 ABCA9Q8IUA7 1624 aa8.69□□□□□ -1.02
PSME4-209ENST00000488687 TRAPPC8Q9Y2L5 1435 aa8.68□□□□□ -1.02
PSME4-209ENST00000488687 HECW2Q9P2P5 1572 aa8.68□□□□□ -1.02
PSME4-209ENST00000488687 AFAP1Q8N556 730 aa8.68□□□□□ -1.02
PSME4-209ENST00000488687 DUOX2Q9NRD8 1548 aa8.68□□□□□ -1.02
PSME4-209ENST00000488687 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
PSME4-209ENST00000488687 KDM5DQ9BY66 1539 aa8.68□□□□□ -1.02
PSME4-209ENST00000488687 FAM135AQ9P2D6 1515 aa8.67□□□□□ -1.02
PSME4-209ENST00000488687 EIF4G2P78344 907 aaKnown RBP eCLIP8.66□□□□□ -1.02
PSME4-209ENST00000488687 ZNF326Q5BKZ1 582 aaKnown RBP8.66□□□□□ -1.02
PSME4-209ENST00000488687 ERBINQ96RT1 1412 aa8.66□□□□□ -1.02
PSME4-209ENST00000488687 SCAPERQ9BY12 1400 aa8.66□□□□□ -1.02
PSME4-209ENST00000488687 RTEL1-TNFRSF6BF6WH68 1400 aa8.65□□□□□ -1.03
PSME4-209ENST00000488687 CD109Q6YHK3 1445 aa8.64□□□□□ -1.03
PSME4-209ENST00000488687 UNC13BO14795 1591 aa8.64□□□□□ -1.03
PSME4-209ENST00000488687 HSPA5P11021 654 aaKnown RBP8.64□□□□□ -1.03
PSME4-209ENST00000488687 NBPF8Q3BBV2 869 aa8.63□□□□□ -1.03
PSME4-209ENST00000488687 ZFYVE16Q7Z3T8 1539 aa8.63□□□□□ -1.03
PSME4-209ENST00000488687 CCDC144AA2RUR9 1427 aa8.63□□□□□ -1.03
PSME4-209ENST00000488687 ATP7AQ04656 1500 aa8.62□□□□□ -1.03
PSME4-209ENST00000488687 KDM2AQ9Y2K7 1162 aa8.62□□□□□ -1.03
PSME4-209ENST00000488687 CFAP74Q9C0B2 1584 aa8.62□□□□□ -1.03
PSME4-209ENST00000488687 IQGAP3Q86VI3 1631 aa8.62□□□□□ -1.03
PSME4-209ENST00000488687 POLA2Q14181 598 aa8.61□□□□□ -1.03
PSME4-209ENST00000488687 DCAF11Q8TEB1 546 aa8.61□□□□□ -1.03
PSME4-209ENST00000488687 KANK1Q14678 1352 aa8.61□□□□□ -1.03
PSME4-209ENST00000488687 ANP32CO43423 234 aa8.61□□□□□ -1.03
PSME4-209ENST00000488687 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
PSME4-209ENST00000488687 IGSF5Q9NSI5 407 aa8.61□□□□□ -1.03
PSME4-209ENST00000488687 KIF3BO15066 747 aa8.6□□□□□ -1.03
PSME4-209ENST00000488687 ZNF518AQ6AHZ1 1483 aa8.6□□□□□ -1.03
PSME4-209ENST00000488687 INO80Q9ULG1 1556 aaPredicted RBP8.6□□□□□ -1.03
PSME4-209ENST00000488687 RGL3Q3MIN7 710 aa8.6□□□□□ -1.03
PSME4-209ENST00000488687 MAGI2Q86UL8 1455 aa8.59□□□□□ -1.03
PSME4-209ENST00000488687 DHX29Q7Z478 1369 aaKnown RBP8.58□□□□□ -1.04
PSME4-209ENST00000488687 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
PSME4-209ENST00000488687 WASHC2AQ641Q2 1341 aa8.57□□□□□ -1.04
PSME4-209ENST00000488687 POGZQ7Z3K3 1410 aa8.57□□□□□ -1.04
PSME4-209ENST00000488687 UHRF1BP1Q6BDS2 1440 aa8.56□□□□□ -1.04
PSME4-209ENST00000488687 NEO1Q92859 1461 aa8.56□□□□□ -1.04
PSME4-209ENST00000488687 KIDINS220Q9ULH0 1771 aa8.56□□□□□ -1.04
PSME4-209ENST00000488687 FRMPD1Q5SYB0 1578 aa8.56□□□□□ -1.04
PSME4-209ENST00000488687 PLA2R1Q13018 1463 aa8.56□□□□□ -1.04
PSME4-209ENST00000488687 USP47Q96K76 1375 aa8.55□□□□□ -1.04
PSME4-209ENST00000488687 ADAMTSL3P82987 1691 aa8.55□□□□□ -1.04
PSME4-209ENST00000488687 EIF2AK4Q9P2K8 1649 aaKnown RBP8.55□□□□□ -1.04
PSME4-209ENST00000488687 POLR3GLQ9BT43 218 aa8.55□□□□□ -1.04
PSME4-209ENST00000488687 A2MP01023 1474 aa8.55□□□□□ -1.04
PSME4-209ENST00000488687 DEPDC5O75140 1603 aa8.55□□□□□ -1.04
PSME4-209ENST00000488687 RAPGEF3O95398 923 aa8.55□□□□□ -1.04
PSME4-209ENST00000488687 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
PSME4-209ENST00000488687 ROCK2O75116 1388 aaKnown RBP8.54□□□□□ -1.04
PSME4-209ENST00000488687 ATP10AO60312 1499 aa8.54□□□□□ -1.04
PSME4-209ENST00000488687 E9PCH4 1651 aa8.54□□□□□ -1.04
PSME4-209ENST00000488687 CCDC7Q96M83 1385 aa8.54□□□□□ -1.04
PSME4-209ENST00000488687 TET3O43151 1660 aa8.53□□□□□ -1.04
PSME4-209ENST00000488687 MLH3Q9UHC1 1453 aa8.53□□□□□ -1.04
PSME4-209ENST00000488687 GGT6Q6P531 493 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms