RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ILDR1Q86SU0 546 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-203ENST00000488146 ABCA6Q8N139 1617 aa4.67□□□□□ -1.66
DEPDC1-203ENST00000488146 NCOA1Q15788 1441 aa4.67□□□□□ -1.66
DEPDC1-203ENST00000488146 CASKIN1Q8WXD9 1431 aa4.67□□□□□ -1.66
DEPDC1-203ENST00000488146 SPATA31D1Q6ZQQ2 1576 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 MAP3K1Q13233 1512 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 PCDH10Q9P2E7 1040 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 UHRF1BP1Q6BDS2 1440 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 TRAPPC8Q9Y2L5 1435 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 ARHGEF5Q12774 1597 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 TCOF1Q13428 1488 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 RNF17Q9BXT8 1623 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 POLR1AO95602 1720 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 CDC42BPBQ9Y5S2 1711 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 MYO3AQ8NEV4 1616 aa4.66□□□□□ -1.66
DEPDC1-203ENST00000488146 SIGLEC1Q9BZZ2 1709 aa4.65□□□□□ -1.66
DEPDC1-203ENST00000488146 MED14O60244 1454 aa4.65□□□□□ -1.66
DEPDC1-203ENST00000488146 NCOA2Q15596 1464 aa4.65□□□□□ -1.66
DEPDC1-203ENST00000488146 KIDINS220Q9ULH0 1771 aa4.65□□□□□ -1.67
DEPDC1-203ENST00000488146 HAX1O00165 279 aa4.65□□□□□ -1.67
DEPDC1-203ENST00000488146 PTPN23Q9H3S7 1636 aa4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 PKD2Q13563 968 aa4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 ZNF692Q9BU19 519 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 CDK11AQ9UQ88 783 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 SAMD9LQ8IVG5 1584 aa4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 CDC42BPAQ5VT25 1732 aa4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 SPDYE1Q8NFV5 336 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 NLRP1Q9C000 1473 aa4.64□□□□□ -1.67
DEPDC1-203ENST00000488146 EHBP1L1Q8N3D4 1523 aa4.63□□□□□ -1.67
DEPDC1-203ENST00000488146 FBXO3Q9UK99 471 aa4.63□□□□□ -1.67
DEPDC1-203ENST00000488146 CLEC11AQ9Y240 323 aa4.63□□□□□ -1.67
DEPDC1-203ENST00000488146 A2ML1A8K2U0 1454 aa4.63□□□□□ -1.67
DEPDC1-203ENST00000488146 SSUH2Q9Y2M2 353 aa4.63□□□□□ -1.67
DEPDC1-203ENST00000488146 PLEKHD1A6NEE1 506 aa4.62□□□□□ -1.67
DEPDC1-203ENST00000488146 CEP170BQ9Y4F5 1589 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-203ENST00000488146 EFCAB2Q5VUJ9 269 aa4.62□□□□□ -1.67
DEPDC1-203ENST00000488146 ATP7AQ04656 1500 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 SCAPERQ9BY12 1400 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 CERKQ8TCT0 537 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 LRRIQ1Q96JM4 1722 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 PZPP20742 1482 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 LRRC9Q6ZRR7 1453 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 ARHGAP35Q9NRY4 1499 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 CEP162Q5TB80 1403 aa4.61□□□□□ -1.67
DEPDC1-203ENST00000488146 RSPH4AQ5TD94 716 aa4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 ARHGAP5Q13017 1502 aa4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 LMTK2Q8IWU2 1503 aa4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 SHANK2Q9UPX8 1470 aa4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 PRKAR2AP13861 404 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 ABCC3O15438 1527 aa4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 PTPRKQ15262 1439 aa4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 ARHGAP31Q2M1Z3 1444 aa4.6□□□□□ -1.67
DEPDC1-203ENST00000488146 NCOA3Q9Y6Q9 1424 aa4.59□□□□□ -1.67
DEPDC1-203ENST00000488146 NWD1Q149M9 1564 aa4.59□□□□□ -1.67
DEPDC1-203ENST00000488146 PROM2Q8N271 834 aa4.59□□□□□ -1.67
DEPDC1-203ENST00000488146 A2MP01023 1474 aa4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 VWDEQ8N2E2 1590 aa4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 NEURL4Q96JN8 1562 aa4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 SLIT1O75093 1534 aa4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 DNMT1P26358 1616 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 SUPT6HQ7KZ85 1726 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 DIP2AQ14689 1571 aa4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 KLHL34Q8N239 644 aa4.58□□□□□ -1.68
DEPDC1-203ENST00000488146 CDK13Q14004 1512 aaKnown RBP4.57□□□□□ -1.68
DEPDC1-203ENST00000488146 CAMSAP1Q5T5Y3 1602 aa4.57□□□□□ -1.68
DEPDC1-203ENST00000488146 SOCS7O14512 581 aa4.57□□□□□ -1.68
DEPDC1-203ENST00000488146 CFAP44Q96MT7 982 aa4.57□□□□□ -1.68
DEPDC1-203ENST00000488146 KDM2AQ9Y2K7 1162 aa4.57□□□□□ -1.68
DEPDC1-203ENST00000488146 ARHGAP23Q9P227 1491 aa4.57□□□□□ -1.68
DEPDC1-203ENST00000488146 CLTCQ00610 1675 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 PRDM15P57071 1507 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 GPATCH8Q9UKJ3 1502 aaKnown RBP4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 EVX2Q03828 476 aa4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 TIAM1Q13009 1591 aa4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 CROCC2H7BZ55 1655 aa4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 IQGAP1P46940 1657 aa4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 UGGT1Q9NYU2 1555 aa4.56□□□□□ -1.68
DEPDC1-203ENST00000488146 MIA2Q96PC5 1412 aa4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 CCDC141Q6ZP82 1450 aa4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 PRR29P0C7W0 189 aa4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 PAXIP1Q6ZW49 1069 aaPredicted RBP4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 NKTRP30414 1462 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 MBD5Q9P267 1494 aa4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 PRAG1Q86YV5 1406 aa4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 MED1Q15648 1581 aaPredicted RBP4.55□□□□□ -1.68
DEPDC1-203ENST00000488146 DHX29Q7Z478 1369 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 SUPT5HO00267 1087 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 RGL2O15211 777 aa4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 LAMC1P11047 1609 aa4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 SYCP2Q9BX26 1530 aa4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 ECM2O94769 699 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 CHADLQ6NUI6 762 aa4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 ERBINQ96RT1 1412 aa4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 RPRD2Q5VT52 1461 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-203ENST00000488146 DUOX2Q9NRD8 1548 aa4.53□□□□□ -1.68
DEPDC1-203ENST00000488146 C19orf67A6NJJ6 358 aa4.53□□□□□ -1.68
DEPDC1-203ENST00000488146 TAOK2Q9UL54 1235 aa4.53□□□□□ -1.68
DEPDC1-203ENST00000488146 CDK12Q9NYV4 1490 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-203ENST00000488146 TPRNQ4KMQ1 711 aa4.53□□□□□ -1.68
DEPDC1-203ENST00000488146 MROH1Q8NDA8 1641 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms