RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 ERBINQ96RT1 1412 aa11.82□□□□□ -0.52
RBM28-206ENST00000487602 MAGI2Q86UL8 1455 aa11.82□□□□□ -0.52
RBM28-206ENST00000487602 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
RBM28-206ENST00000487602 EIF2AK4Q9P2K8 1649 aaKnown RBP11.79□□□□□ -0.52
RBM28-206ENST00000487602 YEATS2Q9ULM3 1422 aa11.79□□□□□ -0.52
RBM28-206ENST00000487602 A2MP01023 1474 aa11.79□□□□□ -0.52
RBM28-206ENST00000487602 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
RBM28-206ENST00000487602 NUP155O75694 1391 aa11.79□□□□□ -0.52
RBM28-206ENST00000487602 KIF3BO15066 747 aa11.78□□□□□ -0.52
RBM28-206ENST00000487602 CLSPNQ9HAW4 1339 aa11.78□□□□□ -0.52
RBM28-206ENST00000487602 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
RBM28-206ENST00000487602 ATP10AO60312 1499 aa11.77□□□□□ -0.52
RBM28-206ENST00000487602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.77□□□□□ -0.532e-7■■■■□ 19.9
RBM28-206ENST00000487602 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
RBM28-206ENST00000487602 PZPP20742 1482 aa11.75□□□□□ -0.53
RBM28-206ENST00000487602 KDM5DQ9BY66 1539 aa11.74□□□□□ -0.53
RBM28-206ENST00000487602 DEPDC5O75140 1603 aa11.74□□□□□ -0.53
RBM28-206ENST00000487602 SIGLEC1Q9BZZ2 1709 aa11.74□□□□□ -0.53
RBM28-206ENST00000487602 UNC13BO14795 1591 aa11.73□□□□□ -0.53
RBM28-206ENST00000487602 ZEB1P37275 1124 aaPredicted RBP11.73□□□□□ -0.53
RBM28-206ENST00000487602 RNF17Q9BXT8 1623 aaKnown RBP11.73□□□□□ -0.53
RBM28-206ENST00000487602 KANK1Q14678 1352 aa11.72□□□□□ -0.53
RBM28-206ENST00000487602 PKD2Q13563 968 aa11.72□□□□□ -0.53
RBM28-206ENST00000487602 GGT6Q6P531 493 aa11.72□□□□□ -0.53
RBM28-206ENST00000487602 AGLP35573 1532 aa11.7□□□□□ -0.54
RBM28-206ENST00000487602 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
RBM28-206ENST00000487602 FAM135AQ9P2D6 1515 aa11.7□□□□□ -0.54
RBM28-206ENST00000487602 ZC3H13Q5T200 1668 aaKnown RBP11.69□□□□□ -0.54
RBM28-206ENST00000487602 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
RBM28-206ENST00000487602 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
RBM28-206ENST00000487602 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
RBM28-206ENST00000487602 VWDEQ8N2E2 1590 aa11.68□□□□□ -0.54
RBM28-206ENST00000487602 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
RBM28-206ENST00000487602 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
RBM28-206ENST00000487602 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
RBM28-206ENST00000487602 NEUROD1Q13562 356 aa11.65□□□□□ -0.54
RBM28-206ENST00000487602 CEP152O94986 1710 aa11.65□□□□□ -0.54
RBM28-206ENST00000487602 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.55
RBM28-206ENST00000487602 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
RBM28-206ENST00000487602 MLECQ14165 292 aa11.64□□□□□ -0.55
RBM28-206ENST00000487602 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
RBM28-206ENST00000487602 ABCC3O15438 1527 aa11.62□□□□□ -0.55
RBM28-206ENST00000487602 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
RBM28-206ENST00000487602 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
RBM28-206ENST00000487602 TET3O43151 1660 aa11.62□□□□□ -0.55
RBM28-206ENST00000487602 PLA2R1Q13018 1463 aa11.61□□□□□ -0.55
RBM28-206ENST00000487602 CLTCQ00610 1675 aaKnown RBP11.61□□□□□ -0.55
RBM28-206ENST00000487602 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
RBM28-206ENST00000487602 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
RBM28-206ENST00000487602 EFCAB6Q5THR3 1501 aa11.6□□□□□ -0.55
RBM28-206ENST00000487602 PTPRTO14522 1441 aa11.6□□□□□ -0.55
RBM28-206ENST00000487602 ARHGAP31Q2M1Z3 1444 aa11.6□□□□□ -0.55
RBM28-206ENST00000487602 E9PCH4 1651 aa11.59□□□□□ -0.55
RBM28-206ENST00000487602 ADAMTSL3P82987 1691 aa11.59□□□□□ -0.55
RBM28-206ENST00000487602 RPRD2Q5VT52 1461 aaKnown RBP11.58□□□□□ -0.56
RBM28-206ENST00000487602 NPATQ14207 1427 aa11.58□□□□□ -0.56
RBM28-206ENST00000487602 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
RBM28-206ENST00000487602 TONSLQ96HA7 1378 aa11.56□□□□□ -0.56
RBM28-206ENST00000487602 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
RBM28-206ENST00000487602 ZMYM3Q14202 1370 aa11.55□□□□□ -0.56
RBM28-206ENST00000487602 SPHKAPQ2M3C7 1700 aa11.55□□□□□ -0.56
RBM28-206ENST00000487602 NOS1P29475 1434 aa11.55□□□□□ -0.56
RBM28-206ENST00000487602 CNTLNQ9NXG0 1405 aa11.55□□□□□ -0.56
RBM28-206ENST00000487602 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
RBM28-206ENST00000487602 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
RBM28-206ENST00000487602 L3MBTL2Q969R5 705 aa11.54□□□□□ -0.56
RBM28-206ENST00000487602 C3P01024 1663 aa11.54□□□□□ -0.56
RBM28-206ENST00000487602 TRPM2O94759 1503 aa11.54□□□□□ -0.56
RBM28-206ENST00000487602 PREX1Q8TCU6 1659 aa11.53□□□□□ -0.56
RBM28-206ENST00000487602 SLC52A1Q9NWF4 448 aa11.52□□□□□ -0.57
RBM28-206ENST00000487602 CFAP65Q6ZU64 1925 aaKnown RBP11.51□□□□□ -0.57
RBM28-206ENST00000487602 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
RBM28-206ENST00000487602 IDI1Q13907 227 aa11.5□□□□□ -0.57
RBM28-206ENST00000487602 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
RBM28-206ENST00000487602 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
RBM28-206ENST00000487602 SPATA31E1Q6ZUB1 1445 aa11.49□□□□□ -0.57
RBM28-206ENST00000487602 SPATA31D1Q6ZQQ2 1576 aa11.49□□□□□ -0.57
RBM28-206ENST00000487602 CLTCL1P53675 1640 aa11.49□□□□□ -0.57
RBM28-206ENST00000487602 SYNMO15061 1565 aa11.48□□□□□ -0.57
RBM28-206ENST00000487602 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
RBM28-206ENST00000487602 PIK3C2BO00750 1634 aa11.47□□□□□ -0.57
RBM28-206ENST00000487602 MYO3AQ8NEV4 1616 aa11.47□□□□□ -0.57
RBM28-206ENST00000487602 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
RBM28-206ENST00000487602 DCAF11Q8TEB1 546 aa11.47□□□□□ -0.57
RBM28-206ENST00000487602 TNRQ92752 1358 aa11.46□□□□□ -0.57
RBM28-206ENST00000487602 STAC3Q96MF2 364 aa11.46□□□□□ -0.57
RBM28-206ENST00000487602 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.57
RBM28-206ENST00000487602 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.58
RBM28-206ENST00000487602 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
RBM28-206ENST00000487602 NBPF8Q3BBV2 869 aa11.45□□□□□ -0.58
RBM28-206ENST00000487602 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
RBM28-206ENST00000487602 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
RBM28-206ENST00000487602 PTPRMP28827 1452 aa11.44□□□□□ -0.58
RBM28-206ENST00000487602 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
RBM28-206ENST00000487602 KIF1BO60333 1816 aa11.43□□□□□ -0.58
RBM28-206ENST00000487602 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
RBM28-206ENST00000487602 KDM5AP29375 1690 aaKnown RBP11.43□□□□□ -0.58
RBM28-206ENST00000487602 ADGRB3O60242 1522 aa11.42□□□□□ -0.58
RBM28-206ENST00000487602 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
RBM28-206ENST00000487602 A2ML1A8K2U0 1454 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms