RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
POLR1A-208ENST00000486964 ADRA2BP18089 450 aa13.8□□□□□ -0.2
POLR1A-208ENST00000486964 INO80Q9ULG1 1556 aaPredicted RBP13.79□□□□□ -0.2
POLR1A-208ENST00000486964 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
POLR1A-208ENST00000486964 KDM5CP41229 1560 aa13.78□□□□□ -0.2
POLR1A-208ENST00000486964 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
POLR1A-208ENST00000486964 ATP7AQ04656 1500 aa13.77□□□□□ -0.2
POLR1A-208ENST00000486964 PPP1R15AO75807 674 aaPredicted RBP13.77□□□□□ -0.21
POLR1A-208ENST00000486964 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.21
POLR1A-208ENST00000486964 PKD2Q13563 968 aa13.76□□□□□ -0.21
POLR1A-208ENST00000486964 UNC13BO14795 1591 aa13.75□□□□□ -0.21
POLR1A-208ENST00000486964 RAPGEF3O95398 923 aa13.74□□□□□ -0.21
POLR1A-208ENST00000486964 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
POLR1A-208ENST00000486964 MYT1Q01538 1121 aa13.73□□□□□ -0.21
POLR1A-208ENST00000486964 RPRD2Q5VT52 1461 aaKnown RBP13.72□□□□□ -0.21
POLR1A-208ENST00000486964 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
POLR1A-208ENST00000486964 TEX14Q8IWB6 1497 aa13.71□□□□□ -0.21
POLR1A-208ENST00000486964 MIER1Q8N108 512 aa13.7□□□□□ -0.22
POLR1A-208ENST00000486964 A2MP01023 1474 aa13.7□□□□□ -0.22
POLR1A-208ENST00000486964 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
POLR1A-208ENST00000486964 IQGAP3Q86VI3 1631 aa13.68□□□□□ -0.22
POLR1A-208ENST00000486964 ATP10AO60312 1499 aa13.68□□□□□ -0.22
POLR1A-208ENST00000486964 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
POLR1A-208ENST00000486964 RICTORQ6R327 1708 aa13.68□□□□□ -0.22
POLR1A-208ENST00000486964 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
POLR1A-208ENST00000486964 HECW2Q9P2P5 1572 aa13.68□□□□□ -0.22
POLR1A-208ENST00000486964 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
POLR1A-208ENST00000486964 KIF3BO15066 747 aa13.67□□□□□ -0.22
POLR1A-208ENST00000486964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■■□□ 18.7
POLR1A-208ENST00000486964 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
POLR1A-208ENST00000486964 EIF2AK4Q9P2K8 1649 aaKnown RBP13.67□□□□□ -0.22
POLR1A-208ENST00000486964 ZMYM4Q5VZL5 1548 aa13.67□□□□□ -0.22
POLR1A-208ENST00000486964 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
POLR1A-208ENST00000486964 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
POLR1A-208ENST00000486964 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
POLR1A-208ENST00000486964 MROH1Q8NDA8 1641 aa13.65□□□□□ -0.22
POLR1A-208ENST00000486964 YEATS2Q9ULM3 1422 aa13.63□□□□□ -0.23
POLR1A-208ENST00000486964 BCORL1Q5H9F3 1711 aa13.63□□□□□ -0.23
POLR1A-208ENST00000486964 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
POLR1A-208ENST00000486964 LMTK2Q8IWU2 1503 aa13.63□□□□□ -0.23
POLR1A-208ENST00000486964 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
POLR1A-208ENST00000486964 ABCA6Q8N139 1617 aa13.63□□□□□ -0.23
POLR1A-208ENST00000486964 PTPRTO14522 1441 aa13.63□□□□□ -0.23
POLR1A-208ENST00000486964 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
POLR1A-208ENST00000486964 KCNA4P22459 653 aa13.62□□□□□ -0.23
POLR1A-208ENST00000486964 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
POLR1A-208ENST00000486964 KANK1Q14678 1352 aa13.61□□□□□ -0.23
POLR1A-208ENST00000486964 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
POLR1A-208ENST00000486964 REREQ9P2R6 1566 aa13.58□□□□□ -0.24
POLR1A-208ENST00000486964 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
POLR1A-208ENST00000486964 AGLP35573 1532 aa13.56□□□□□ -0.24
POLR1A-208ENST00000486964 TET3O43151 1660 aa13.56□□□□□ -0.24
POLR1A-208ENST00000486964 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
POLR1A-208ENST00000486964 UHRF1BP1Q6BDS2 1440 aa13.55□□□□□ -0.24
POLR1A-208ENST00000486964 GGT6Q6P531 493 aa13.55□□□□□ -0.24
POLR1A-208ENST00000486964 E9PCH4 1651 aa13.54□□□□□ -0.24
POLR1A-208ENST00000486964 ARHGAP31Q2M1Z3 1444 aa13.53□□□□□ -0.24
POLR1A-208ENST00000486964 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
POLR1A-208ENST00000486964 ABCC3O15438 1527 aa13.52□□□□□ -0.24
POLR1A-208ENST00000486964 TRPM2O94759 1503 aa13.52□□□□□ -0.24
POLR1A-208ENST00000486964 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.24
POLR1A-208ENST00000486964 WASHC2CQ9Y4E1 1318 aa13.52□□□□□ -0.25
POLR1A-208ENST00000486964 NPATQ14207 1427 aa13.51□□□□□ -0.25
POLR1A-208ENST00000486964 NEURL4Q96JN8 1562 aa13.49□□□□□ -0.25
POLR1A-208ENST00000486964 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
POLR1A-208ENST00000486964 NOS1P29475 1434 aa13.49□□□□□ -0.25
POLR1A-208ENST00000486964 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
POLR1A-208ENST00000486964 ARHGEF40Q8TER5 1519 aa13.48□□□□□ -0.25
POLR1A-208ENST00000486964 CNTLNQ9NXG0 1405 aa13.47□□□□□ -0.25
POLR1A-208ENST00000486964 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
POLR1A-208ENST00000486964 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
POLR1A-208ENST00000486964 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
POLR1A-208ENST00000486964 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
POLR1A-208ENST00000486964 CEP152O94986 1710 aa13.43□□□□□ -0.26
POLR1A-208ENST00000486964 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
POLR1A-208ENST00000486964 ZC3H13Q5T200 1668 aaKnown RBP13.43□□□□□ -0.26
POLR1A-208ENST00000486964 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
POLR1A-208ENST00000486964 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
POLR1A-208ENST00000486964 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
POLR1A-208ENST00000486964 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
POLR1A-208ENST00000486964 PIAS4Q8N2W9 510 aaPredicted RBP13.42□□□□□ -0.26
POLR1A-208ENST00000486964 ADAMTSL3P82987 1691 aa13.42□□□□□ -0.26
POLR1A-208ENST00000486964 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
POLR1A-208ENST00000486964 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
POLR1A-208ENST00000486964 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
POLR1A-208ENST00000486964 SLC52A1Q9NWF4 448 aa13.4□□□□□ -0.26
POLR1A-208ENST00000486964 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
POLR1A-208ENST00000486964 HIRIP3Q9BW71 556 aaPredicted RBP13.39□□□□□ -0.27
POLR1A-208ENST00000486964 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
POLR1A-208ENST00000486964 IDI1Q13907 227 aa13.39□□□□□ -0.27
POLR1A-208ENST00000486964 SYNMO15061 1565 aa13.38□□□□□ -0.27
POLR1A-208ENST00000486964 FBXO31Q5XUX0 539 aaPredicted RBP13.38□□□□□ -0.27
POLR1A-208ENST00000486964 PIK3C2BO00750 1634 aa13.37□□□□□ -0.27
POLR1A-208ENST00000486964 ADGRB3O60242 1522 aa13.37□□□□□ -0.27
POLR1A-208ENST00000486964 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
POLR1A-208ENST00000486964 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
POLR1A-208ENST00000486964 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
POLR1A-208ENST00000486964 NRXN1Q9ULB1 1477 aa13.36□□□□□ -0.27
POLR1A-208ENST00000486964 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
POLR1A-208ENST00000486964 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms