RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 GGT6Q6P531 493 aa16.33■□□□□ 0.2
PTPN7-213ENST00000486116 NPHP4O75161 1426 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-213ENST00000486116 EEA1Q15075 1411 aa16.33■□□□□ 0.2
PTPN7-213ENST00000486116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPN7-213ENST00000486116 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
PTPN7-213ENST00000486116 TNRQ92752 1358 aa16.3■□□□□ 0.2
PTPN7-213ENST00000486116 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
PTPN7-213ENST00000486116 UGGT1Q9NYU2 1555 aa16.28■□□□□ 0.2
PTPN7-213ENST00000486116 HNRNPMP52272 730 aaKnown RBP eCLIP16.27■□□□□ 0.2
PTPN7-213ENST00000486116 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
PTPN7-213ENST00000486116 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
PTPN7-213ENST00000486116 PZPP20742 1482 aa16.27■□□□□ 0.19
PTPN7-213ENST00000486116 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
PTPN7-213ENST00000486116 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
PTPN7-213ENST00000486116 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
PTPN7-213ENST00000486116 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
PTPN7-213ENST00000486116 KIAA1107Q9UPP5 1409 aa16.23■□□□□ 0.19
PTPN7-213ENST00000486116 FAM135AQ9P2D6 1515 aa16.23■□□□□ 0.19
PTPN7-213ENST00000486116 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-213ENST00000486116 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
PTPN7-213ENST00000486116 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.18
PTPN7-213ENST00000486116 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
PTPN7-213ENST00000486116 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
PTPN7-213ENST00000486116 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
PTPN7-213ENST00000486116 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
PTPN7-213ENST00000486116 UPF1Q92900 1129 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPN7-213ENST00000486116 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
PTPN7-213ENST00000486116 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
PTPN7-213ENST00000486116 MBD5Q9P267 1494 aa16.12■□□□□ 0.17
PTPN7-213ENST00000486116 PHLPP1O60346 1717 aa16.12■□□□□ 0.17
PTPN7-213ENST00000486116 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
PTPN7-213ENST00000486116 RTEL1-TNFRSF6BF6WH68 1400 aa16.11■□□□□ 0.17
PTPN7-213ENST00000486116 CFDP1Q9UEE9 299 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-213ENST00000486116 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
PTPN7-213ENST00000486116 KIF3BO15066 747 aa16.1■□□□□ 0.17
PTPN7-213ENST00000486116 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
PTPN7-213ENST00000486116 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
PTPN7-213ENST00000486116 WASHC2CQ9Y4E1 1318 aa16.09■□□□□ 0.17
PTPN7-213ENST00000486116 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
PTPN7-213ENST00000486116 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
PTPN7-213ENST00000486116 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-213ENST00000486116 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
PTPN7-213ENST00000486116 ERVK-7P63135 1459 aa16.06■□□□□ 0.16
PTPN7-213ENST00000486116 SLIT1O75093 1534 aa16.05■□□□□ 0.16
PTPN7-213ENST00000486116 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
PTPN7-213ENST00000486116 ARHGAP23Q9P227 1491 aa16.05■□□□□ 0.16
PTPN7-213ENST00000486116 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
PTPN7-213ENST00000486116 LRP6O75581 1613 aa16.05■□□□□ 0.16
PTPN7-213ENST00000486116 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
PTPN7-213ENST00000486116 ABCC3O15438 1527 aa16.04■□□□□ 0.16
PTPN7-213ENST00000486116 CEP152O94986 1710 aa16.04■□□□□ 0.16
PTPN7-213ENST00000486116 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
PTPN7-213ENST00000486116 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
PTPN7-213ENST00000486116 LTKP29376 864 aa16.02■□□□□ 0.16
PTPN7-213ENST00000486116 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
PTPN7-213ENST00000486116 JCADQ9P266 1359 aa16.01■□□□□ 0.15
PTPN7-213ENST00000486116 MROH1Q8NDA8 1641 aa16■□□□□ 0.15
PTPN7-213ENST00000486116 CCDC141Q6ZP82 1450 aa15.99■□□□□ 0.15
PTPN7-213ENST00000486116 SHPRHQ149N8 1683 aa15.98■□□□□ 0.15
PTPN7-213ENST00000486116 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
PTPN7-213ENST00000486116 NWD1Q149M9 1564 aa15.97■□□□□ 0.15
PTPN7-213ENST00000486116 TXNDC2Q86VQ3 553 aa15.97■□□□□ 0.15
PTPN7-213ENST00000486116 PRDM15P57071 1507 aaPredicted RBP15.96■□□□□ 0.15
PTPN7-213ENST00000486116 EIF2AK4Q9P2K8 1649 aaKnown RBP15.96■□□□□ 0.15
PTPN7-213ENST00000486116 CDK12Q9NYV4 1490 aaPredicted RBP15.96■□□□□ 0.14
PTPN7-213ENST00000486116 ZNF772Q68DY9 489 aaPredicted RBP15.95■□□□□ 0.14
PTPN7-213ENST00000486116 RBM33Q96EV2 1170 aaKnown RBP15.95■□□□□ 0.14
PTPN7-213ENST00000486116 CAMSAP2Q08AD1 1489 aa15.95■□□□□ 0.14
PTPN7-213ENST00000486116 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
PTPN7-213ENST00000486116 TET3O43151 1660 aa15.94■□□□□ 0.14
PTPN7-213ENST00000486116 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
PTPN7-213ENST00000486116 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
PTPN7-213ENST00000486116 MTUS2Q5JR59 1369 aa15.92■□□□□ 0.14
PTPN7-213ENST00000486116 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
PTPN7-213ENST00000486116 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
PTPN7-213ENST00000486116 KCNA6P17658 529 aa15.91■□□□□ 0.14
PTPN7-213ENST00000486116 PROSER2Q86WR7 435 aaPredicted RBP15.91■□□□□ 0.14
PTPN7-213ENST00000486116 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
PTPN7-213ENST00000486116 SPATA31A6Q5VVP1 1343 aa15.91■□□□□ 0.14
PTPN7-213ENST00000486116 RXRBP28702 533 aa15.9■□□□□ 0.14
PTPN7-213ENST00000486116 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
PTPN7-213ENST00000486116 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
PTPN7-213ENST00000486116 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
PTPN7-213ENST00000486116 AHDC1Q5TGY3 1603 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-213ENST00000486116 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
PTPN7-213ENST00000486116 MSH6P52701 1360 aa15.88■□□□□ 0.13
PTPN7-213ENST00000486116 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
PTPN7-213ENST00000486116 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
PTPN7-213ENST00000486116 RGS12O14924 1447 aa15.87■□□□□ 0.13
PTPN7-213ENST00000486116 MAST1Q9Y2H9 1570 aa15.87■□□□□ 0.13
PTPN7-213ENST00000486116 CEP162Q5TB80 1403 aa15.86■□□□□ 0.13
PTPN7-213ENST00000486116 EFCAB6Q5THR3 1501 aa15.85■□□□□ 0.13
PTPN7-213ENST00000486116 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
PTPN7-213ENST00000486116 SLC26A8Q96RN1 970 aa15.84■□□□□ 0.13
PTPN7-213ENST00000486116 ARHGAP31Q2M1Z3 1444 aa15.83■□□□□ 0.12
PTPN7-213ENST00000486116 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.82■□□□□ 0.12
PTPN7-213ENST00000486116 RSPH4AQ5TD94 716 aa15.82■□□□□ 0.12
PTPN7-213ENST00000486116 AFF2P51816 1311 aa15.8■□□□□ 0.12
PTPN7-213ENST00000486116 MYO5BQ9ULV0 1848 aa15.79■□□□□ 0.12
PTPN7-213ENST00000486116 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms