RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 ADAMTSL3P82987 1691 aa19.04■□□□□ 0.64
HDAC7-223ENST00000485796 GCC2Q8IWJ2 1684 aa19.04■□□□□ 0.64
HDAC7-223ENST00000485796 RNF17Q9BXT8 1623 aaKnown RBP19.03■□□□□ 0.64
HDAC7-223ENST00000485796 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
HDAC7-223ENST00000485796 MADDQ8WXG6 1647 aa19.02■□□□□ 0.64
HDAC7-223ENST00000485796 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
HDAC7-223ENST00000485796 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
HDAC7-223ENST00000485796 WASHC2CQ9Y4E1 1318 aa19■□□□□ 0.63
HDAC7-223ENST00000485796 CEBPAP49715 358 aaPredicted RBP18.99■□□□□ 0.63
HDAC7-223ENST00000485796 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
HDAC7-223ENST00000485796 NUP155O75694 1391 aa18.98■□□□□ 0.63
HDAC7-223ENST00000485796 ABCC3O15438 1527 aa18.97■□□□□ 0.63
HDAC7-223ENST00000485796 PRDM15P57071 1507 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-223ENST00000485796 TRIM52Q96A61 297 aa18.97■□□□□ 0.63
HDAC7-223ENST00000485796 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
HDAC7-223ENST00000485796 RIMS1Q86UR5 1692 aaKnown RBP18.96■□□□□ 0.63
HDAC7-223ENST00000485796 UNC13BO14795 1591 aa18.96■□□□□ 0.63
HDAC7-223ENST00000485796 VWDEQ8N2E2 1590 aa18.96■□□□□ 0.63
HDAC7-223ENST00000485796 CLTCQ00610 1675 aaKnown RBP18.95■□□□□ 0.62
HDAC7-223ENST00000485796 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
HDAC7-223ENST00000485796 FER1L4A9Z1Z3 1794 aa18.95■□□□□ 0.62
HDAC7-223ENST00000485796 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
HDAC7-223ENST00000485796 KDM5DQ9BY66 1539 aa18.94■□□□□ 0.62
HDAC7-223ENST00000485796 PTPRMP28827 1452 aa18.93■□□□□ 0.62
HDAC7-223ENST00000485796 CEP152O94986 1710 aa18.93■□□□□ 0.62
HDAC7-223ENST00000485796 KANK1Q14678 1352 aa18.93■□□□□ 0.62
HDAC7-223ENST00000485796 FBXO31Q5XUX0 539 aaPredicted RBP18.92■□□□□ 0.62
HDAC7-223ENST00000485796 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
HDAC7-223ENST00000485796 PZPP20742 1482 aa18.9■□□□□ 0.62
HDAC7-223ENST00000485796 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
HDAC7-223ENST00000485796 FAM135AQ9P2D6 1515 aa18.89■□□□□ 0.61
HDAC7-223ENST00000485796 HRCP23327 699 aa18.88■□□□□ 0.61
HDAC7-223ENST00000485796 IQGAP3Q86VI3 1631 aa18.88■□□□□ 0.61
HDAC7-223ENST00000485796 FOXD1Q16676 465 aa18.87■□□□□ 0.61
HDAC7-223ENST00000485796 MPHOSPH9Q99550 1183 aa18.87■□□□□ 0.61
HDAC7-223ENST00000485796 C3P01024 1663 aa18.86■□□□□ 0.61
HDAC7-223ENST00000485796 CAMSAP1Q5T5Y3 1602 aa18.86■□□□□ 0.61
HDAC7-223ENST00000485796 NPATQ14207 1427 aa18.86■□□□□ 0.61
HDAC7-223ENST00000485796 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
HDAC7-223ENST00000485796 PKD2Q13563 968 aa18.85■□□□□ 0.61
HDAC7-223ENST00000485796 ZC3H13Q5T200 1668 aaKnown RBP18.85■□□□□ 0.61
HDAC7-223ENST00000485796 MROH2AA6NES4 1674 aa18.84■□□□□ 0.61
HDAC7-223ENST00000485796 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
HDAC7-223ENST00000485796 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.61
HDAC7-223ENST00000485796 TET3O43151 1660 aa18.82■□□□□ 0.6
HDAC7-223ENST00000485796 CFAP65Q6ZU64 1925 aaKnown RBP18.82■□□□□ 0.6
HDAC7-223ENST00000485796 E9PCH4 1651 aa18.8■□□□□ 0.6
HDAC7-223ENST00000485796 ERVK-7P63135 1459 aa18.79■□□□□ 0.6
HDAC7-223ENST00000485796 NOS1P29475 1434 aa18.77■□□□□ 0.6
HDAC7-223ENST00000485796 TNRQ92752 1358 aa18.77■□□□□ 0.6
HDAC7-223ENST00000485796 PLA2R1Q13018 1463 aa18.77■□□□□ 0.59
HDAC7-223ENST00000485796 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
HDAC7-223ENST00000485796 PREX1Q8TCU6 1659 aa18.75■□□□□ 0.59
HDAC7-223ENST00000485796 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
HDAC7-223ENST00000485796 SYNMO15061 1565 aa18.74■□□□□ 0.59
HDAC7-223ENST00000485796 RPRD2Q5VT52 1461 aaKnown RBP18.74■□□□□ 0.59
HDAC7-223ENST00000485796 DHX57Q6P158 1386 aaKnown RBP18.73■□□□□ 0.59
HDAC7-223ENST00000485796 PTPRTO14522 1441 aa18.73■□□□□ 0.59
HDAC7-223ENST00000485796 UGGT1Q9NYU2 1555 aa18.72■□□□□ 0.59
HDAC7-223ENST00000485796 IDI1Q13907 227 aa18.72■□□□□ 0.59
HDAC7-223ENST00000485796 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
HDAC7-223ENST00000485796 SETD1BQ9UPS6 1966 aaKnown RBP18.68■□□□□ 0.58
HDAC7-223ENST00000485796 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
HDAC7-223ENST00000485796 HSPA2P54652 639 aa18.66■□□□□ 0.58
HDAC7-223ENST00000485796 MYO3AQ8NEV4 1616 aa18.66■□□□□ 0.58
HDAC7-223ENST00000485796 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
HDAC7-223ENST00000485796 SLC52A1Q9NWF4 448 aa18.65■□□□□ 0.58
HDAC7-223ENST00000485796 UHRF1BP1Q6BDS2 1440 aa18.65■□□□□ 0.58
HDAC7-223ENST00000485796 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
HDAC7-223ENST00000485796 TRPM2O94759 1503 aa18.64■□□□□ 0.58
HDAC7-223ENST00000485796 A2ML1A8K2U0 1454 aa18.64■□□□□ 0.57
HDAC7-223ENST00000485796 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
HDAC7-223ENST00000485796 CHGAP10645 457 aaKnown RBP18.63■□□□□ 0.57
HDAC7-223ENST00000485796 NLRP1Q9C000 1473 aa18.63■□□□□ 0.57
HDAC7-223ENST00000485796 PIK3C2BO00750 1634 aa18.63■□□□□ 0.57
HDAC7-223ENST00000485796 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
HDAC7-223ENST00000485796 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
HDAC7-223ENST00000485796 CCDC144AA2RUR9 1427 aa18.58■□□□□ 0.57
HDAC7-223ENST00000485796 STAG3Q9UJ98 1225 aa18.58■□□□□ 0.56
HDAC7-223ENST00000485796 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
HDAC7-223ENST00000485796 ADGRB3O60242 1522 aa18.56■□□□□ 0.56
HDAC7-223ENST00000485796 UBR1Q8IWV7 1749 aa18.56■□□□□ 0.56
HDAC7-223ENST00000485796 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
HDAC7-223ENST00000485796 NUTM2DQ5VT03 806 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-223ENST00000485796 THEMISQ8N1K5 641 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-223ENST00000485796 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
HDAC7-223ENST00000485796 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
HDAC7-223ENST00000485796 SPATA31E1Q6ZUB1 1445 aa18.54■□□□□ 0.56
HDAC7-223ENST00000485796 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
HDAC7-223ENST00000485796 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
HDAC7-223ENST00000485796 LTKP29376 864 aa18.53■□□□□ 0.56
HDAC7-223ENST00000485796 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.56
HDAC7-223ENST00000485796 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
HDAC7-223ENST00000485796 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
HDAC7-223ENST00000485796 TMEM2Q9UHN6 1383 aa18.52■□□□□ 0.55
HDAC7-223ENST00000485796 ARHGAP23Q9P227 1491 aa18.5■□□□□ 0.55
HDAC7-223ENST00000485796 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
HDAC7-223ENST00000485796 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
HDAC7-223ENST00000485796 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
HDAC7-223ENST00000485796 KIF1BO60333 1816 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms