RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
SRRM1-214ENST00000485541 ZFYVE16Q7Z3T8 1539 aa11.31□□□□□ -0.6
SRRM1-214ENST00000485541 ASXL2Q76L83 1435 aa11.31□□□□□ -0.6
SRRM1-214ENST00000485541 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
SRRM1-214ENST00000485541 FANCAO15360 1455 aa11.3□□□□□ -0.6
SRRM1-214ENST00000485541 HNRNPMP52272 730 aaKnown RBP eCLIP11.29□□□□□ -0.61e-9■■■■■ 32.3
SRRM1-214ENST00000485541 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
SRRM1-214ENST00000485541 ATP7AQ04656 1500 aa11.28□□□□□ -0.6
SRRM1-214ENST00000485541 ATP10AO60312 1499 aa11.27□□□□□ -0.6
SRRM1-214ENST00000485541 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.61
SRRM1-214ENST00000485541 NUP155O75694 1391 aa11.27□□□□□ -0.61
SRRM1-214ENST00000485541 TET3O43151 1660 aa11.26□□□□□ -0.61
SRRM1-214ENST00000485541 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
SRRM1-214ENST00000485541 GLI2P10070 1586 aa11.25□□□□□ -0.61
SRRM1-214ENST00000485541 KDM5CP41229 1560 aa11.25□□□□□ -0.61
SRRM1-214ENST00000485541 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
SRRM1-214ENST00000485541 ZNF518AQ6AHZ1 1483 aa11.25□□□□□ -0.61
SRRM1-214ENST00000485541 MAP3K4Q9Y6R4 1608 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 KIDINS220Q9ULH0 1771 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 UHRF1BP1Q6BDS2 1440 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 TRAPPC8Q9Y2L5 1435 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 NEO1Q92859 1461 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 VWDEQ8N2E2 1590 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 NEURL4Q96JN8 1562 aa11.24□□□□□ -0.61
SRRM1-214ENST00000485541 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
SRRM1-214ENST00000485541 PRDM15P57071 1507 aaPredicted RBP11.23□□□□□ -0.61
SRRM1-214ENST00000485541 RIMBP3CA6NJZ7 1639 aa11.23□□□□□ -0.61
SRRM1-214ENST00000485541 RIMBP3BA6NNM3 1639 aa11.23□□□□□ -0.61
SRRM1-214ENST00000485541 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
SRRM1-214ENST00000485541 RIMBP3Q9UFD9 1639 aa11.23□□□□□ -0.61
SRRM1-214ENST00000485541 CEP152O94986 1710 aa11.23□□□□□ -0.61
SRRM1-214ENST00000485541 LAMC1P11047 1609 aa11.22□□□□□ -0.61
SRRM1-214ENST00000485541 PKD2Q13563 968 aa11.22□□□□□ -0.61
SRRM1-214ENST00000485541 HECW2Q9P2P5 1572 aa11.22□□□□□ -0.61
SRRM1-214ENST00000485541 E9PCH4 1651 aa11.21□□□□□ -0.61
SRRM1-214ENST00000485541 SPAG9O60271 1321 aaKnown RBP11.21□□□□□ -0.61
SRRM1-214ENST00000485541 CENPBP07199 599 aaPredicted RBP11.2□□□□□ -0.62
SRRM1-214ENST00000485541 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
SRRM1-214ENST00000485541 RALGAPBQ86X10 1494 aa11.19□□□□□ -0.62
SRRM1-214ENST00000485541 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
SRRM1-214ENST00000485541 SCAPERQ9BY12 1400 aa11.19□□□□□ -0.62
SRRM1-214ENST00000485541 CD109Q6YHK3 1445 aa11.18□□□□□ -0.62
SRRM1-214ENST00000485541 POGZQ7Z3K3 1410 aa11.18□□□□□ -0.62
SRRM1-214ENST00000485541 RICTORQ6R327 1708 aa11.18□□□□□ -0.62
SRRM1-214ENST00000485541 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-214ENST00000485541 TRPM2O94759 1503 aa11.18□□□□□ -0.62
SRRM1-214ENST00000485541 LMTK2Q8IWU2 1503 aa11.18□□□□□ -0.62
SRRM1-214ENST00000485541 CCDC144AA2RUR9 1427 aa11.18□□□□□ -0.62
SRRM1-214ENST00000485541 TRPM1Q7Z4N2 1603 aa11.17□□□□□ -0.62
SRRM1-214ENST00000485541 MROH1Q8NDA8 1641 aa11.17□□□□□ -0.62
SRRM1-214ENST00000485541 EIF4G2P78344 907 aaKnown RBP eCLIP11.17□□□□□ -0.62
SRRM1-214ENST00000485541 KIF1BO60333 1816 aa11.16□□□□□ -0.62
SRRM1-214ENST00000485541 ABCB7O75027 752 aa11.16□□□□□ -0.62
SRRM1-214ENST00000485541 MIER1Q8N108 512 aa11.16□□□□□ -0.62
SRRM1-214ENST00000485541 ZC3H13Q5T200 1668 aaKnown RBP11.16□□□□□ -0.62
SRRM1-214ENST00000485541 KANK1Q14678 1352 aa11.16□□□□□ -0.62
SRRM1-214ENST00000485541 DHX29Q7Z478 1369 aaKnown RBP11.16□□□□□ -0.62
SRRM1-214ENST00000485541 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
SRRM1-214ENST00000485541 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
SRRM1-214ENST00000485541 SPATA31E1Q6ZUB1 1445 aa11.15□□□□□ -0.62
SRRM1-214ENST00000485541 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.63
SRRM1-214ENST00000485541 DIP2BQ9P265 1576 aa11.14□□□□□ -0.63
SRRM1-214ENST00000485541 EFCAB6Q5THR3 1501 aa11.14□□□□□ -0.63
SRRM1-214ENST00000485541 PTPRTO14522 1441 aa11.13□□□□□ -0.63
SRRM1-214ENST00000485541 ZMYM4Q5VZL5 1548 aa11.13□□□□□ -0.63
SRRM1-214ENST00000485541 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
SRRM1-214ENST00000485541 A2MP01023 1474 aa11.12□□□□□ -0.63
SRRM1-214ENST00000485541 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
SRRM1-214ENST00000485541 ARID4BQ4LE39 1312 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-214ENST00000485541 ZBTB22O15209 634 aa11.11□□□□□ -0.63
SRRM1-214ENST00000485541 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-214ENST00000485541 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
SRRM1-214ENST00000485541 IFT172Q9UG01 1749 aa11.11□□□□□ -0.63
SRRM1-214ENST00000485541 HSPA5P11021 654 aaKnown RBP11.1□□□□□ -0.63
SRRM1-214ENST00000485541 FRMPD1Q5SYB0 1578 aa11.1□□□□□ -0.63
SRRM1-214ENST00000485541 REREQ9P2R6 1566 aa11.1□□□□□ -0.63
SRRM1-214ENST00000485541 DIP2CQ9Y2E4 1556 aa11.1□□□□□ -0.63
SRRM1-214ENST00000485541 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
SRRM1-214ENST00000485541 PPRC1Q5VV67 1664 aaKnown RBP11.09□□□□□ -0.63
SRRM1-214ENST00000485541 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
SRRM1-214ENST00000485541 NBPF8Q3BBV2 869 aa11.09□□□□□ -0.63
SRRM1-214ENST00000485541 PRAG1Q86YV5 1406 aa11.09□□□□□ -0.63
SRRM1-214ENST00000485541 GPRASP1Q5JY77 1395 aa11.08□□□□□ -0.64
SRRM1-214ENST00000485541 KIF13AQ9H1H9 1805 aa11.08□□□□□ -0.64
SRRM1-214ENST00000485541 MADDQ8WXG6 1647 aa11.08□□□□□ -0.64
SRRM1-214ENST00000485541 CNTLNQ9NXG0 1405 aa11.08□□□□□ -0.64
SRRM1-214ENST00000485541 USP47Q96K76 1375 aa11.07□□□□□ -0.64
SRRM1-214ENST00000485541 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
SRRM1-214ENST00000485541 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
SRRM1-214ENST00000485541 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
SRRM1-214ENST00000485541 CCDC7Q96M83 1385 aa11.06□□□□□ -0.64
SRRM1-214ENST00000485541 IQGAP1P46940 1657 aa11.06□□□□□ -0.64
SRRM1-214ENST00000485541 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
SRRM1-214ENST00000485541 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
SRRM1-214ENST00000485541 ANP32CO43423 234 aa11.05□□□□□ -0.64
SRRM1-214ENST00000485541 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
SRRM1-214ENST00000485541 MYOM2P54296 1465 aa11.04□□□□□ -0.64
SRRM1-214ENST00000485541 WASHC2AQ641Q2 1341 aa11.04□□□□□ -0.64
SRRM1-214ENST00000485541 TSPOAP1O95153 1857 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms