RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.04
LRIF1-202ENST00000485275 TRIM52Q96A61 297 aa21.52■■□□□ 1.04
LRIF1-202ENST00000485275 IQGAP3Q86VI3 1631 aa21.5■■□□□ 1.03
LRIF1-202ENST00000485275 RNF17Q9BXT8 1623 aaKnown RBP21.5■■□□□ 1.03
LRIF1-202ENST00000485275 PRDM15P57071 1507 aaPredicted RBP21.49■■□□□ 1.03
LRIF1-202ENST00000485275 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
LRIF1-202ENST00000485275 NUP155O75694 1391 aa21.48■■□□□ 1.03
LRIF1-202ENST00000485275 REREQ9P2R6 1566 aa21.48■■□□□ 1.03
LRIF1-202ENST00000485275 MPHOSPH9Q99550 1183 aa21.47■■□□□ 1.03
LRIF1-202ENST00000485275 VWDEQ8N2E2 1590 aa21.46■■□□□ 1.03
LRIF1-202ENST00000485275 ATP10AO60312 1499 aa21.46■■□□□ 1.03
LRIF1-202ENST00000485275 KIF3BO15066 747 aa21.44■■□□□ 1.02
LRIF1-202ENST00000485275 FOXD1Q16676 465 aa21.42■■□□□ 1.02
LRIF1-202ENST00000485275 CLSPNQ9HAW4 1339 aa21.41■■□□□ 1.02
LRIF1-202ENST00000485275 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
LRIF1-202ENST00000485275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.41■■□□□ 1.023e-9■□□□□ 9.1
LRIF1-202ENST00000485275 SLC4A1APQ9BWU0 796 aaKnown RBP21.41■■□□□ 1.02
LRIF1-202ENST00000485275 CEP152O94986 1710 aa21.4■■□□□ 1.02
LRIF1-202ENST00000485275 AGLP35573 1532 aa21.39■■□□□ 1.02
LRIF1-202ENST00000485275 TET3O43151 1660 aa21.37■■□□□ 1.01
LRIF1-202ENST00000485275 E9PCH4 1651 aa21.36■■□□□ 1.01
LRIF1-202ENST00000485275 PKD2Q13563 968 aa21.36■■□□□ 1.01
LRIF1-202ENST00000485275 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
LRIF1-202ENST00000485275 ANKRD30BQ9BXX2 1392 aa21.34■■□□□ 1.01
LRIF1-202ENST00000485275 ABCC3O15438 1527 aa21.34■■□□□ 1.01
LRIF1-202ENST00000485275 LMTK2Q8IWU2 1503 aa21.34■■□□□ 1.01
LRIF1-202ENST00000485275 EFCAB6Q5THR3 1501 aa21.33■■□□□ 1
LRIF1-202ENST00000485275 GGT6Q6P531 493 aa21.31■■□□□ 1
LRIF1-202ENST00000485275 ZC3H13Q5T200 1668 aaKnown RBP21.3■■□□□ 1
LRIF1-202ENST00000485275 KANK1Q14678 1352 aa21.29■■□□□ 1
LRIF1-202ENST00000485275 CAMSAP1Q5T5Y3 1602 aa21.29■■□□□ 1
LRIF1-202ENST00000485275 PLA2R1Q13018 1463 aa21.29■■□□□ 1
LRIF1-202ENST00000485275 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
LRIF1-202ENST00000485275 SPHKAPQ2M3C7 1700 aa21.25■□□□□ 0.99
LRIF1-202ENST00000485275 RPRD2Q5VT52 1461 aaKnown RBP21.24■□□□□ 0.99
LRIF1-202ENST00000485275 NPATQ14207 1427 aa21.23■□□□□ 0.99
LRIF1-202ENST00000485275 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
LRIF1-202ENST00000485275 CLTCQ00610 1675 aaKnown RBP21.23■□□□□ 0.99
LRIF1-202ENST00000485275 WASHC2CQ9Y4E1 1318 aa21.21■□□□□ 0.99
LRIF1-202ENST00000485275 TRPM2O94759 1503 aa21.21■□□□□ 0.99
LRIF1-202ENST00000485275 PTPRTO14522 1441 aa21.2■□□□□ 0.98
LRIF1-202ENST00000485275 MLECQ14165 292 aa21.19■□□□□ 0.98
LRIF1-202ENST00000485275 CLTCL1P53675 1640 aa21.17■□□□□ 0.98
LRIF1-202ENST00000485275 UGGT1Q9NYU2 1555 aa21.17■□□□□ 0.98
LRIF1-202ENST00000485275 CFAP65Q6ZU64 1925 aaKnown RBP21.17■□□□□ 0.98
LRIF1-202ENST00000485275 ARID4BQ4LE39 1312 aaPredicted RBP21.16■□□□□ 0.98
LRIF1-202ENST00000485275 ARHGAP31Q2M1Z3 1444 aa21.16■□□□□ 0.98
LRIF1-202ENST00000485275 SYNMO15061 1565 aa21.14■□□□□ 0.98
LRIF1-202ENST00000485275 PREX1Q8TCU6 1659 aa21.14■□□□□ 0.97
LRIF1-202ENST00000485275 CCDC144AA2RUR9 1427 aa21.13■□□□□ 0.97
LRIF1-202ENST00000485275 NOS1P29475 1434 aa21.12■□□□□ 0.97
LRIF1-202ENST00000485275 FER1L4A9Z1Z3 1794 aa21.11■□□□□ 0.97
LRIF1-202ENST00000485275 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
LRIF1-202ENST00000485275 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
LRIF1-202ENST00000485275 MROH2AA6NES4 1674 aa21.09■□□□□ 0.97
LRIF1-202ENST00000485275 PIK3C2BO00750 1634 aa21.09■□□□□ 0.97
LRIF1-202ENST00000485275 CNTLNQ9NXG0 1405 aa21.08■□□□□ 0.97
LRIF1-202ENST00000485275 ERVK-7P63135 1459 aa21.07■□□□□ 0.96
LRIF1-202ENST00000485275 MADDQ8WXG6 1647 aa21.06■□□□□ 0.96
LRIF1-202ENST00000485275 SPATA31D1Q6ZQQ2 1576 aa21.06■□□□□ 0.96
LRIF1-202ENST00000485275 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
LRIF1-202ENST00000485275 L3MBTL2Q969R5 705 aa21.05■□□□□ 0.96
LRIF1-202ENST00000485275 TIMELESSQ9UNS1 1208 aa21.05■□□□□ 0.96
LRIF1-202ENST00000485275 ADAMTSL3P82987 1691 aa21.05■□□□□ 0.96
LRIF1-202ENST00000485275 FBXO31Q5XUX0 539 aaPredicted RBP21.04■□□□□ 0.96
LRIF1-202ENST00000485275 ZMYM3Q14202 1370 aa21.03■□□□□ 0.96
LRIF1-202ENST00000485275 C3P01024 1663 aa21.03■□□□□ 0.96
LRIF1-202ENST00000485275 KIF1BO60333 1816 aa21.02■□□□□ 0.95
LRIF1-202ENST00000485275 ADGRB3O60242 1522 aa21.01■□□□□ 0.95
LRIF1-202ENST00000485275 RIMS1Q86UR5 1692 aaKnown RBP21.01■□□□□ 0.95
LRIF1-202ENST00000485275 PPP1R15AO75807 674 aaPredicted RBP21■□□□□ 0.95
LRIF1-202ENST00000485275 NEURL4Q96JN8 1562 aa21■□□□□ 0.95
LRIF1-202ENST00000485275 ESF1Q9H501 851 aaKnown RBP20.97■□□□□ 0.95
LRIF1-202ENST00000485275 MYO5BQ9ULV0 1848 aa20.97■□□□□ 0.95
LRIF1-202ENST00000485275 IFT172Q9UG01 1749 aa20.96■□□□□ 0.95
LRIF1-202ENST00000485275 RGL3Q3MIN7 710 aa20.95■□□□□ 0.94
LRIF1-202ENST00000485275 TMEM131LA2VDJ0 1609 aa20.94■□□□□ 0.94
LRIF1-202ENST00000485275 CEBPAP49715 358 aaPredicted RBP20.94■□□□□ 0.94
LRIF1-202ENST00000485275 NBPF8Q3BBV2 869 aa20.93■□□□□ 0.94
LRIF1-202ENST00000485275 IDI1Q13907 227 aa20.92■□□□□ 0.94
LRIF1-202ENST00000485275 UHRF1BP1Q6BDS2 1440 aa20.9■□□□□ 0.94
LRIF1-202ENST00000485275 PPLO60437 1756 aa20.9■□□□□ 0.94
LRIF1-202ENST00000485275 DCAF11Q8TEB1 546 aa20.9■□□□□ 0.94
LRIF1-202ENST00000485275 TNRQ92752 1358 aa20.89■□□□□ 0.93
LRIF1-202ENST00000485275 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
LRIF1-202ENST00000485275 NEXMIFQ5QGS0 1516 aa20.88■□□□□ 0.93
LRIF1-202ENST00000485275 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
LRIF1-202ENST00000485275 KDM2AQ9Y2K7 1162 aa20.87■□□□□ 0.93
LRIF1-202ENST00000485275 TRPM1Q7Z4N2 1603 aa20.85■□□□□ 0.93
LRIF1-202ENST00000485275 MYO3AQ8NEV4 1616 aa20.85■□□□□ 0.93
LRIF1-202ENST00000485275 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
LRIF1-202ENST00000485275 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
LRIF1-202ENST00000485275 UBR1Q8IWV7 1749 aa20.84■□□□□ 0.93
LRIF1-202ENST00000485275 A2ML1A8K2U0 1454 aa20.84■□□□□ 0.93
LRIF1-202ENST00000485275 MYOM2P54296 1465 aa20.84■□□□□ 0.93
LRIF1-202ENST00000485275 ZNF326Q5BKZ1 582 aaKnown RBP20.83■□□□□ 0.93
LRIF1-202ENST00000485275 KDM5AP29375 1690 aaKnown RBP20.82■□□□□ 0.92
LRIF1-202ENST00000485275 RALGAPBQ86X10 1494 aa20.82■□□□□ 0.92
LRIF1-202ENST00000485275 PTPRMP28827 1452 aa20.81■□□□□ 0.92
LRIF1-202ENST00000485275 NRXN1Q9ULB1 1477 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms