RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 PLEKHH2Q8IVE3 1493 aa26.71■■□□□ 1.87
LIMS2-215ENST00000484252 KDM2AQ9Y2K7 1162 aa26.7■■□□□ 1.87
LIMS2-215ENST00000484252 SYCP2Q9BX26 1530 aa26.7■■□□□ 1.87
LIMS2-215ENST00000484252 ST20-MTHFSA0A0A6YYL1 179 aa26.7■■□□□ 1.86
LIMS2-215ENST00000484252 CCDC144AA2RUR9 1427 aa26.7■■□□□ 1.86
LIMS2-215ENST00000484252 ARHGAP5Q13017 1502 aa26.69■■□□□ 1.86
LIMS2-215ENST00000484252 E9PCH4 1651 aa26.69■■□□□ 1.86
LIMS2-215ENST00000484252 PLXNC1O60486 1568 aa26.69■■□□□ 1.86
LIMS2-215ENST00000484252 NUDCQ9Y266 331 aa26.69■■□□□ 1.86
LIMS2-215ENST00000484252 FANCIQ9NVI1 1328 aa26.68■■□□□ 1.86
LIMS2-215ENST00000484252 PNISRQ8TF01 805 aaKnown RBP26.68■■□□□ 1.86
LIMS2-215ENST00000484252 TTC37Q6PGP7 1564 aa26.68■■□□□ 1.86
LIMS2-215ENST00000484252 TRPM1Q7Z4N2 1603 aa26.68■■□□□ 1.86
LIMS2-215ENST00000484252 PRAG1Q86YV5 1406 aa26.68■■□□□ 1.86
LIMS2-215ENST00000484252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.67■■□□□ 1.86
LIMS2-215ENST00000484252 RALBP1Q15311 655 aa26.67■■□□□ 1.86
LIMS2-215ENST00000484252 BRD4O60885 1362 aaPredicted RBP26.66■■□□□ 1.86
LIMS2-215ENST00000484252 TMC1Q8TDI8 760 aa26.66■■□□□ 1.86
LIMS2-215ENST00000484252 RNF123Q5XPI4 1314 aa26.64■■□□□ 1.85
LIMS2-215ENST00000484252 IQGAP3Q86VI3 1631 aa26.64■■□□□ 1.85
LIMS2-215ENST00000484252 ABCC2Q92887 1545 aa26.64■■□□□ 1.85
LIMS2-215ENST00000484252 MYBBP1AQ9BQG0 1328 aaKnown RBP26.64■■□□□ 1.85
LIMS2-215ENST00000484252 MYO5CQ9NQX4 1742 aa26.63■■□□□ 1.85
LIMS2-215ENST00000484252 LAMC1P11047 1609 aa26.63■■□□□ 1.85
LIMS2-215ENST00000484252 LRPPRCP42704 1394 aaKnown RBP26.62■■□□□ 1.85
LIMS2-215ENST00000484252 GPRASP1Q5JY77 1395 aa26.61■■□□□ 1.85
LIMS2-215ENST00000484252 DUOX2Q9NRD8 1548 aa26.6■■□□□ 1.85
LIMS2-215ENST00000484252 PLA2R1Q13018 1463 aa26.59■■□□□ 1.85
LIMS2-215ENST00000484252 ERCC6L2Q5T890 1561 aa26.59■■□□□ 1.85
LIMS2-215ENST00000484252 CNGB1Q14028 1251 aaPredicted RBP26.58■■□□□ 1.85
LIMS2-215ENST00000484252 B4GALNT3Q6L9W6 998 aa26.58■■□□□ 1.84
LIMS2-215ENST00000484252 ATP10AO60312 1499 aa26.57■■□□□ 1.84
LIMS2-215ENST00000484252 EIF2AK4Q9P2K8 1649 aaKnown RBP26.57■■□□□ 1.84
LIMS2-215ENST00000484252 MAGI2Q86UL8 1455 aa26.57■■□□□ 1.84
LIMS2-215ENST00000484252 A2MP01023 1474 aa26.56■■□□□ 1.84
LIMS2-215ENST00000484252 ERBINQ96RT1 1412 aa26.56■■□□□ 1.84
LIMS2-215ENST00000484252 PRDM15P57071 1507 aaPredicted RBP26.53■■□□□ 1.84
LIMS2-215ENST00000484252 PARD3Q8TEW0 1356 aa26.51■■□□□ 1.83
LIMS2-215ENST00000484252 COL17A1Q9UMD9 1497 aaPredicted RBP26.5■■□□□ 1.83
LIMS2-215ENST00000484252 PLCH2O75038 1416 aa26.5■■□□□ 1.83
LIMS2-215ENST00000484252 WASHC2CQ9Y4E1 1318 aa26.49■■□□□ 1.83
LIMS2-215ENST00000484252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.49■■□□□ 1.83
LIMS2-215ENST00000484252 NLRP13Q86W25 1043 aa26.48■■□□□ 1.83
LIMS2-215ENST00000484252 MSH5O43196 834 aa26.48■■□□□ 1.83
LIMS2-215ENST00000484252 RGL3Q3MIN7 710 aa26.47■■□□□ 1.83
LIMS2-215ENST00000484252 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
LIMS2-215ENST00000484252 UHRF1BP1LA0JNW5 1464 aa26.46■■□□□ 1.83
LIMS2-215ENST00000484252 NBPF1Q3BBV0 1214 aa26.45■■□□□ 1.83
LIMS2-215ENST00000484252 EFCAB2Q5VUJ9 269 aa26.43■■□□□ 1.82
LIMS2-215ENST00000484252 ABCC1P33527 1531 aa26.43■■□□□ 1.82
LIMS2-215ENST00000484252 INSRP06213 1382 aa26.43■■□□□ 1.82
LIMS2-215ENST00000484252 ZCCHC11Q5TAX3 1644 aaKnown RBP26.42■■□□□ 1.82
LIMS2-215ENST00000484252 PER1O15534 1290 aaPredicted RBP26.42■■□□□ 1.82
LIMS2-215ENST00000484252 TESK2Q96S53 571 aa26.41■■□□□ 1.82
LIMS2-215ENST00000484252 ZMYM4Q5VZL5 1548 aa26.41■■□□□ 1.82
LIMS2-215ENST00000484252 RNF17Q9BXT8 1623 aaKnown RBP26.4■■□□□ 1.82
LIMS2-215ENST00000484252 PDE3BQ13370 1112 aa26.4■■□□□ 1.82
LIMS2-215ENST00000484252 CCDC136Q96JN2 1154 aa26.39■■□□□ 1.82
LIMS2-215ENST00000484252 DISP3Q9P2K9 1392 aa26.37■■□□□ 1.81
LIMS2-215ENST00000484252 TMF1P82094 1093 aa26.37■■□□□ 1.81
LIMS2-215ENST00000484252 ARAP3Q8WWN8 1544 aa26.36■■□□□ 1.81
LIMS2-215ENST00000484252 RTEL1-TNFRSF6BF6WH68 1400 aa26.35■■□□□ 1.81
LIMS2-215ENST00000484252 ERICH6Q7L0X2 663 aa26.34■■□□□ 1.81
LIMS2-215ENST00000484252 TRAPPC8Q9Y2L5 1435 aa26.32■■□□□ 1.8
LIMS2-215ENST00000484252 STAC3Q96MF2 364 aa26.32■■□□□ 1.8
LIMS2-215ENST00000484252 TRPM2O94759 1503 aa26.3■■□□□ 1.8
LIMS2-215ENST00000484252 RRP1P56182 461 aaKnown RBP26.29■■□□□ 1.8
LIMS2-215ENST00000484252 PANK3Q9H999 370 aa26.29■■□□□ 1.8
LIMS2-215ENST00000484252 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
LIMS2-215ENST00000484252 BLMP54132 1417 aaPredicted RBP26.28■■□□□ 1.8
LIMS2-215ENST00000484252 MYT1LQ9UL68 1186 aa26.27■■□□□ 1.8
LIMS2-215ENST00000484252 SPAG9O60271 1321 aaKnown RBP26.27■■□□□ 1.8
LIMS2-215ENST00000484252 RCAN3Q9UKA8 241 aa26.27■■□□□ 1.8
LIMS2-215ENST00000484252 ZFYVE16Q7Z3T8 1539 aa26.26■■□□□ 1.79
LIMS2-215ENST00000484252 SENP3-EIF4A1A0A087X0R7 540 aa26.26■■□□□ 1.79
LIMS2-215ENST00000484252 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
LIMS2-215ENST00000484252 PTPRTO14522 1441 aa26.25■■□□□ 1.79
LIMS2-215ENST00000484252 DEPDC5O75140 1603 aa26.25■■□□□ 1.79
LIMS2-215ENST00000484252 CEP152O94986 1710 aa26.24■■□□□ 1.79
LIMS2-215ENST00000484252 SPHKAPQ2M3C7 1700 aa26.23■■□□□ 1.79
LIMS2-215ENST00000484252 CC2D1BQ5T0F9 858 aaKnown RBP26.23■■□□□ 1.79
LIMS2-215ENST00000484252 SCAPERQ9BY12 1400 aa26.22■■□□□ 1.79
LIMS2-215ENST00000484252 CDCA8Q53HL2 280 aa26.2■■□□□ 1.78
LIMS2-215ENST00000484252 TET3O43151 1660 aa26.2■■□□□ 1.78
LIMS2-215ENST00000484252 WDR7Q9Y4E6 1490 aa26.19■■□□□ 1.78
LIMS2-215ENST00000484252 SCAF11Q99590 1463 aaKnown RBP26.19■■□□□ 1.78
LIMS2-215ENST00000484252 NEURL4Q96JN8 1562 aa26.18■■□□□ 1.78
LIMS2-215ENST00000484252 CLTCL1P53675 1640 aa26.16■■□□□ 1.78
LIMS2-215ENST00000484252 SYNMO15061 1565 aa26.16■■□□□ 1.78
LIMS2-215ENST00000484252 KANK1Q14678 1352 aa26.16■■□□□ 1.78
LIMS2-215ENST00000484252 VWDEQ8N2E2 1590 aa26.15■■□□□ 1.78
LIMS2-215ENST00000484252 INO80Q9ULG1 1556 aaPredicted RBP26.15■■□□□ 1.78
LIMS2-215ENST00000484252 AFAP1Q8N556 730 aa26.14■■□□□ 1.77
LIMS2-215ENST00000484252 ABCA9Q8IUA7 1624 aa26.14■■□□□ 1.77
LIMS2-215ENST00000484252 ATP7AQ04656 1500 aa26.13■■□□□ 1.77
LIMS2-215ENST00000484252 SALL2Q9Y467 1007 aaPredicted RBP26.13■■□□□ 1.77
LIMS2-215ENST00000484252 KIAA1210Q9ULL0 1709 aa26.13■■□□□ 1.77
LIMS2-215ENST00000484252 EXOC6Q8TAG9 804 aa26.12■■□□□ 1.77
LIMS2-215ENST00000484252 KNSTRNQ9Y448 316 aa26.12■■□□□ 1.77
LIMS2-215ENST00000484252 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms