RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 FER1L4A9Z1Z3 1794 aa25.36■■□□□ 1.65
SF1-215ENST00000482693 RIMS1Q86UR5 1692 aaKnown RBP25.36■■□□□ 1.65
SF1-215ENST00000482693 ANKRD50Q9ULJ7 1429 aa25.34■■□□□ 1.65
SF1-215ENST00000482693 WASHC2CQ9Y4E1 1318 aa25.32■■□□□ 1.64
SF1-215ENST00000482693 RNF17Q9BXT8 1623 aaKnown RBP25.31■■□□□ 1.64
SF1-215ENST00000482693 FAM135AQ9P2D6 1515 aa25.31■■□□□ 1.64
SF1-215ENST00000482693 ZMYM3Q14202 1370 aa25.29■■□□□ 1.64
SF1-215ENST00000482693 CEBPAP49715 358 aaPredicted RBP25.28■■□□□ 1.64
SF1-215ENST00000482693 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
SF1-215ENST00000482693 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
SF1-215ENST00000482693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.25■■□□□ 1.631e-12■■■□□ 16.5
SF1-215ENST00000482693 KANK1Q14678 1352 aa25.25■■□□□ 1.63
SF1-215ENST00000482693 MROH2AA6NES4 1674 aa25.24■■□□□ 1.63
SF1-215ENST00000482693 CLTCQ00610 1675 aaKnown RBP25.23■■□□□ 1.63
SF1-215ENST00000482693 MROH1Q8NDA8 1641 aa25.23■■□□□ 1.63
SF1-215ENST00000482693 PRDM15P57071 1507 aaPredicted RBP25.22■■□□□ 1.63
SF1-215ENST00000482693 DEPDC5O75140 1603 aa25.22■■□□□ 1.63
SF1-215ENST00000482693 HFM1A2PYH4 1435 aa25.21■■□□□ 1.63
SF1-215ENST00000482693 NAIPQ13075 1403 aa25.21■■□□□ 1.63
SF1-215ENST00000482693 ABCC3O15438 1527 aa25.2■■□□□ 1.62
SF1-215ENST00000482693 C3P01024 1663 aa25.19■■□□□ 1.62
SF1-215ENST00000482693 NPATQ14207 1427 aa25.18■■□□□ 1.62
SF1-215ENST00000482693 ZC3H13Q5T200 1668 aaKnown RBP25.17■■□□□ 1.62
SF1-215ENST00000482693 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.62
SF1-215ENST00000482693 PZPP20742 1482 aa25.14■■□□□ 1.61
SF1-215ENST00000482693 LMTK2Q8IWU2 1503 aa25.13■■□□□ 1.61
SF1-215ENST00000482693 UNC13BO14795 1591 aa25.12■■□□□ 1.61
SF1-215ENST00000482693 ARHGAP31Q2M1Z3 1444 aa25.12■■□□□ 1.61
SF1-215ENST00000482693 GCC2Q8IWJ2 1684 aa25.11■■□□□ 1.61
SF1-215ENST00000482693 NUP155O75694 1391 aa25.11■■□□□ 1.61
SF1-215ENST00000482693 FBXO31Q5XUX0 539 aaPredicted RBP25.11■■□□□ 1.61
SF1-215ENST00000482693 CEP152O94986 1710 aa25.08■■□□□ 1.61
SF1-215ENST00000482693 CAMSAP1Q5T5Y3 1602 aa25.08■■□□□ 1.6
SF1-215ENST00000482693 SETD1BQ9UPS6 1966 aaKnown RBP25.07■■□□□ 1.6
SF1-215ENST00000482693 ACIN1Q9UKV3 1341 aaKnown RBP25.06■■□□□ 1.6
SF1-215ENST00000482693 UHRF1BP1Q6BDS2 1440 aa25.05■■□□□ 1.6
SF1-215ENST00000482693 TNRQ92752 1358 aa25.05■■□□□ 1.6
SF1-215ENST00000482693 SETD5Q9C0A6 1442 aa25.04■■□□□ 1.6
SF1-215ENST00000482693 LMTK3Q96Q04 1460 aa25.03■■□□□ 1.6
SF1-215ENST00000482693 PREX1Q8TCU6 1659 aa25.02■■□□□ 1.6
SF1-215ENST00000482693 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
SF1-215ENST00000482693 EFCAB6Q5THR3 1501 aa25.02■■□□□ 1.6
SF1-215ENST00000482693 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
SF1-215ENST00000482693 ERVK-7P63135 1459 aa25.01■■□□□ 1.59
SF1-215ENST00000482693 RPRD2Q5VT52 1461 aaKnown RBP25■■□□□ 1.59
SF1-215ENST00000482693 TET3O43151 1660 aa24.99■■□□□ 1.59
SF1-215ENST00000482693 SPATA31D1Q6ZQQ2 1576 aa24.99■■□□□ 1.59
SF1-215ENST00000482693 NLRP1Q9C000 1473 aa24.96■■□□□ 1.59
SF1-215ENST00000482693 HRCP23327 699 aa24.95■■□□□ 1.58
SF1-215ENST00000482693 HSPA2P54652 639 aa24.94■■□□□ 1.58
SF1-215ENST00000482693 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
SF1-215ENST00000482693 RAB3GAP2Q9H2M9 1393 aa24.93■■□□□ 1.58
SF1-215ENST00000482693 A2ML1A8K2U0 1454 aa24.93■■□□□ 1.58
SF1-215ENST00000482693 NOS1P29475 1434 aa24.93■■□□□ 1.58
SF1-215ENST00000482693 MYO3AQ8NEV4 1616 aa24.93■■□□□ 1.58
SF1-215ENST00000482693 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
SF1-215ENST00000482693 CEP170BQ9Y4F5 1589 aaPredicted RBP24.9■■□□□ 1.58
SF1-215ENST00000482693 SLC52A1Q9NWF4 448 aa24.9■■□□□ 1.58
SF1-215ENST00000482693 PKD2Q13563 968 aa24.88■■□□□ 1.57
SF1-215ENST00000482693 THEMISQ8N1K5 641 aaPredicted RBP24.88■■□□□ 1.57
SF1-215ENST00000482693 E9PCH4 1651 aa24.88■■□□□ 1.57
SF1-215ENST00000482693 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
SF1-215ENST00000482693 CFAP65Q6ZU64 1925 aaKnown RBP24.87■■□□□ 1.57
SF1-215ENST00000482693 IDI1Q13907 227 aa24.86■■□□□ 1.57
SF1-215ENST00000482693 MPHOSPH9Q99550 1183 aa24.86■■□□□ 1.57
SF1-215ENST00000482693 SYNMO15061 1565 aa24.84■■□□□ 1.57
SF1-215ENST00000482693 UGGT1Q9NYU2 1555 aa24.83■■□□□ 1.57
SF1-215ENST00000482693 PTPRTO14522 1441 aa24.82■■□□□ 1.56
SF1-215ENST00000482693 STAG3Q9UJ98 1225 aa24.8■■□□□ 1.56
SF1-215ENST00000482693 PLA2R1Q13018 1463 aa24.79■■□□□ 1.56
SF1-215ENST00000482693 DMRT2Q9Y5R5 561 aa24.77■■□□□ 1.56
SF1-215ENST00000482693 PIK3C2BO00750 1634 aa24.75■■□□□ 1.55
SF1-215ENST00000482693 ANKLE2Q86XL3 938 aa24.74■■□□□ 1.55
SF1-215ENST00000482693 FOXD1Q16676 465 aa24.73■■□□□ 1.55
SF1-215ENST00000482693 UBR1Q8IWV7 1749 aa24.72■■□□□ 1.55
SF1-215ENST00000482693 NCKAP5LQ9HCH0 1330 aa24.72■■□□□ 1.55
SF1-215ENST00000482693 SPHKAPQ2M3C7 1700 aa24.72■■□□□ 1.55
SF1-215ENST00000482693 KDM5AP29375 1690 aaKnown RBP24.72■■□□□ 1.55
SF1-215ENST00000482693 TRPM2O94759 1503 aa24.71■■□□□ 1.55
SF1-215ENST00000482693 ADGRB3O60242 1522 aa24.7■■□□□ 1.54
SF1-215ENST00000482693 TMEM2Q9UHN6 1383 aa24.69■■□□□ 1.54
SF1-215ENST00000482693 CHGAP10645 457 aaKnown RBP24.69■■□□□ 1.54
SF1-215ENST00000482693 STRCQ7RTU9 1775 aa24.69■■□□□ 1.54
SF1-215ENST00000482693 EID1Q9Y6B2 187 aa24.68■■□□□ 1.54
SF1-215ENST00000482693 ARHGAP23Q9P227 1491 aa24.68■■□□□ 1.54
SF1-215ENST00000482693 SLIT1O75093 1534 aa24.67■■□□□ 1.54
SF1-215ENST00000482693 HDGFP51858 240 aaKnown RBP24.66■■□□□ 1.54
SF1-215ENST00000482693 TXNDC2Q86VQ3 553 aa24.66■■□□□ 1.54
SF1-215ENST00000482693 TMEM131LA2VDJ0 1609 aa24.65■■□□□ 1.54
SF1-215ENST00000482693 LTKP29376 864 aa24.63■■□□□ 1.53
SF1-215ENST00000482693 CCDC144AA2RUR9 1427 aa24.62■■□□□ 1.53
SF1-215ENST00000482693 CLTCL1P53675 1640 aa24.62■■□□□ 1.53
SF1-215ENST00000482693 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.61■■□□□ 1.53
SF1-215ENST00000482693 MED14O60244 1454 aa24.61■■□□□ 1.53
SF1-215ENST00000482693 SCAF11Q99590 1463 aaKnown RBP24.61■■□□□ 1.53
SF1-215ENST00000482693 NPHP4O75161 1426 aaPredicted RBP24.59■■□□□ 1.53
SF1-215ENST00000482693 RIMS2Q9UQ26 1411 aa24.59■■□□□ 1.53
SF1-215ENST00000482693 ANKRD30BQ9BXX2 1392 aa24.58■■□□□ 1.53
SF1-215ENST00000482693 ZNF326Q5BKZ1 582 aaKnown RBP24.58■■□□□ 1.53
SF1-215ENST00000482693 ZFYVE9O95405 1425 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms