RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
CCNC-204ENST00000482541 PLXNC1O60486 1568 aa12.2□□□□□ -0.46
CCNC-204ENST00000482541 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
CCNC-204ENST00000482541 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
CCNC-204ENST00000482541 APLP2Q06481 763 aa12.2□□□□□ -0.46
CCNC-204ENST00000482541 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
CCNC-204ENST00000482541 CAMSAP2Q08AD1 1489 aa12.19□□□□□ -0.46
CCNC-204ENST00000482541 CCDC141Q6ZP82 1450 aa12.19□□□□□ -0.46
CCNC-204ENST00000482541 UHRF1BP1Q6BDS2 1440 aa12.19□□□□□ -0.46
CCNC-204ENST00000482541 GGT6Q6P531 493 aa12.19□□□□□ -0.46
CCNC-204ENST00000482541 DHX29Q7Z478 1369 aaKnown RBP12.19□□□□□ -0.46
CCNC-204ENST00000482541 MROH2AA6NES4 1674 aa12.18□□□□□ -0.46
CCNC-204ENST00000482541 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
CCNC-204ENST00000482541 ARHGEF5Q12774 1597 aa12.16□□□□□ -0.46
CCNC-204ENST00000482541 NPATQ14207 1427 aa12.16□□□□□ -0.46
CCNC-204ENST00000482541 MYOM3Q5VTT5 1437 aa12.15□□□□□ -0.46
CCNC-204ENST00000482541 KIF3BO15066 747 aa12.14□□□□□ -0.47
CCNC-204ENST00000482541 FBXO41Q8TF61 875 aa12.14□□□□□ -0.47
CCNC-204ENST00000482541 CLTCQ00610 1675 aaKnown RBP12.12□□□□□ -0.47
CCNC-204ENST00000482541 STRCQ7RTU9 1775 aa12.11□□□□□ -0.47
CCNC-204ENST00000482541 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
CCNC-204ENST00000482541 PTPRKQ15262 1439 aa12.1□□□□□ -0.47
CCNC-204ENST00000482541 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
CCNC-204ENST00000482541 WASHC2CQ9Y4E1 1318 aa12.09□□□□□ -0.47
CCNC-204ENST00000482541 PTPRTO14522 1441 aa12.08□□□□□ -0.48
CCNC-204ENST00000482541 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
CCNC-204ENST00000482541 KDM5DQ9BY66 1539 aa12.06□□□□□ -0.48
CCNC-204ENST00000482541 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
CCNC-204ENST00000482541 PTPN23Q9H3S7 1636 aa12.05□□□□□ -0.48
CCNC-204ENST00000482541 FKBP8Q14318 412 aa12.05□□□□□ -0.48
CCNC-204ENST00000482541 CAMSAP1Q5T5Y3 1602 aa12.05□□□□□ -0.48
CCNC-204ENST00000482541 PZPP20742 1482 aa12.04□□□□□ -0.48
CCNC-204ENST00000482541 ABCC5O15440 1437 aa12.04□□□□□ -0.48
CCNC-204ENST00000482541 FGD6Q6ZV73 1430 aa12.04□□□□□ -0.48
CCNC-204ENST00000482541 PKD2Q13563 968 aa12.04□□□□□ -0.48
CCNC-204ENST00000482541 FBXO31Q5XUX0 539 aaPredicted RBP12.04□□□□□ -0.48
CCNC-204ENST00000482541 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
CCNC-204ENST00000482541 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
CCNC-204ENST00000482541 EIF2AK4Q9P2K8 1649 aaKnown RBP12.04□□□□□ -0.48
CCNC-204ENST00000482541 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
CCNC-204ENST00000482541 CEP170BQ9Y4F5 1589 aaPredicted RBP12.03□□□□□ -0.48
CCNC-204ENST00000482541 DUOX2Q9NRD8 1548 aa12.03□□□□□ -0.48
CCNC-204ENST00000482541 PLA2R1Q13018 1463 aa12.03□□□□□ -0.48
CCNC-204ENST00000482541 SHANK2Q9UPX8 1470 aa12.03□□□□□ -0.48
CCNC-204ENST00000482541 RNF17Q9BXT8 1623 aaKnown RBP12.02□□□□□ -0.48
CCNC-204ENST00000482541 TNRQ92752 1358 aa12.02□□□□□ -0.48
CCNC-204ENST00000482541 RRP7BPQ9NSQ0 103 aa12.02□□□□□ -0.49
CCNC-204ENST00000482541 A2ML1A8K2U0 1454 aa12.02□□□□□ -0.49
CCNC-204ENST00000482541 DAPK1P53355 1430 aa12.02□□□□□ -0.49
CCNC-204ENST00000482541 DNMT1P26358 1616 aaKnown RBP12.01□□□□□ -0.49
CCNC-204ENST00000482541 KIF15Q9NS87 1388 aa12.01□□□□□ -0.49
CCNC-204ENST00000482541 NCKAP5LQ9HCH0 1330 aa12.01□□□□□ -0.49
CCNC-204ENST00000482541 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
CCNC-204ENST00000482541 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
CCNC-204ENST00000482541 ERBINQ96RT1 1412 aa12□□□□□ -0.49
CCNC-204ENST00000482541 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
CCNC-204ENST00000482541 THEMISQ8N1K5 641 aaPredicted RBP11.99□□□□□ -0.49
CCNC-204ENST00000482541 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
CCNC-204ENST00000482541 ABCC3O15438 1527 aa11.98□□□□□ -0.49
CCNC-204ENST00000482541 MROH1Q8NDA8 1641 aa11.98□□□□□ -0.49
CCNC-204ENST00000482541 CHIC2Q9UKJ5 165 aa11.97□□□□□ -0.49
CCNC-204ENST00000482541 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
CCNC-204ENST00000482541 FAM50AQ14320 339 aaKnown RBP11.96□□□□□ -0.49
CCNC-204ENST00000482541 ANKLE2Q86XL3 938 aa11.96□□□□□ -0.49
CCNC-204ENST00000482541 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.5
CCNC-204ENST00000482541 SPATA31D1Q6ZQQ2 1576 aa11.95□□□□□ -0.5
CCNC-204ENST00000482541 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
CCNC-204ENST00000482541 KANK1Q14678 1352 aa11.95□□□□□ -0.5
CCNC-204ENST00000482541 PRDM15P57071 1507 aaPredicted RBP11.95□□□□□ -0.5
CCNC-204ENST00000482541 UGGT1Q9NYU2 1555 aa11.94□□□□□ -0.5
CCNC-204ENST00000482541 CEP152O94986 1710 aa11.94□□□□□ -0.5
CCNC-204ENST00000482541 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
CCNC-204ENST00000482541 ERVK-7P63135 1459 aa11.93□□□□□ -0.5
CCNC-204ENST00000482541 IQSEC2Q5JU85 1478 aa11.93□□□□□ -0.5
CCNC-204ENST00000482541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCNC-204ENST00000482541 DEPDC5O75140 1603 aa11.93□□□□□ -0.5
CCNC-204ENST00000482541 ZNF335Q9H4Z2 1342 aaPredicted RBP11.93□□□□□ -0.5
CCNC-204ENST00000482541 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
CCNC-204ENST00000482541 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
CCNC-204ENST00000482541 MED14O60244 1454 aa11.9□□□□□ -0.5
CCNC-204ENST00000482541 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
CCNC-204ENST00000482541 ANKRD50Q9ULJ7 1429 aa11.9□□□□□ -0.5
CCNC-204ENST00000482541 LMTK2Q8IWU2 1503 aa11.9□□□□□ -0.51
CCNC-204ENST00000482541 VWDEQ8N2E2 1590 aa11.89□□□□□ -0.51
CCNC-204ENST00000482541 NEURL4Q96JN8 1562 aa11.89□□□□□ -0.51
CCNC-204ENST00000482541 NPHP4O75161 1426 aaPredicted RBP11.88□□□□□ -0.51
CCNC-204ENST00000482541 ROCK1Q13464 1354 aa11.87□□□□□ -0.51
CCNC-204ENST00000482541 UBR1Q8IWV7 1749 aa11.87□□□□□ -0.51
CCNC-204ENST00000482541 IDI1Q13907 227 aa11.86□□□□□ -0.51
CCNC-204ENST00000482541 CPS1P31327 1500 aa11.85□□□□□ -0.51
CCNC-204ENST00000482541 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
CCNC-204ENST00000482541 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
CCNC-204ENST00000482541 SLC52A1Q9NWF4 448 aa11.85□□□□□ -0.51
CCNC-204ENST00000482541 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
CCNC-204ENST00000482541 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
CCNC-204ENST00000482541 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
CCNC-204ENST00000482541 SLIT1O75093 1534 aa11.84□□□□□ -0.51
CCNC-204ENST00000482541 RPRD2Q5VT52 1461 aaKnown RBP11.84□□□□□ -0.51
CCNC-204ENST00000482541 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
CCNC-204ENST00000482541 NOS1P29475 1434 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms