RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
SNRNP25-206ENST00000481947 MROH1Q8NDA8 1641 aa17.64■□□□□ 0.41
SNRNP25-206ENST00000481947 PZPP20742 1482 aa17.63■□□□□ 0.41
SNRNP25-206ENST00000481947 SIGLEC1Q9BZZ2 1709 aa17.63■□□□□ 0.41
SNRNP25-206ENST00000481947 IQGAP3Q86VI3 1631 aa17.62■□□□□ 0.41
SNRNP25-206ENST00000481947 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
SNRNP25-206ENST00000481947 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
SNRNP25-206ENST00000481947 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
SNRNP25-206ENST00000481947 AGLP35573 1532 aa17.6■□□□□ 0.41
SNRNP25-206ENST00000481947 VWDEQ8N2E2 1590 aa17.6■□□□□ 0.41
SNRNP25-206ENST00000481947 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
SNRNP25-206ENST00000481947 NUP155O75694 1391 aa17.59■□□□□ 0.41
SNRNP25-206ENST00000481947 KIF3BO15066 747 aa17.59■□□□□ 0.41
SNRNP25-206ENST00000481947 MPHOSPH9Q99550 1183 aa17.56■□□□□ 0.4
SNRNP25-206ENST00000481947 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
SNRNP25-206ENST00000481947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.42e-12■■■■■ 39
SNRNP25-206ENST00000481947 CEP152O94986 1710 aa17.54■□□□□ 0.4
SNRNP25-206ENST00000481947 TET3O43151 1660 aa17.53■□□□□ 0.4
SNRNP25-206ENST00000481947 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
SNRNP25-206ENST00000481947 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.4
SNRNP25-206ENST00000481947 KANK1Q14678 1352 aa17.52■□□□□ 0.39
SNRNP25-206ENST00000481947 ZC3H13Q5T200 1668 aaKnown RBP17.52■□□□□ 0.39
SNRNP25-206ENST00000481947 E9PCH4 1651 aa17.49■□□□□ 0.39
SNRNP25-206ENST00000481947 ABCC3O15438 1527 aa17.49■□□□□ 0.39
SNRNP25-206ENST00000481947 EFCAB6Q5THR3 1501 aa17.48■□□□□ 0.39
SNRNP25-206ENST00000481947 PKD2Q13563 968 aa17.48■□□□□ 0.39
SNRNP25-206ENST00000481947 GGT6Q6P531 493 aa17.48■□□□□ 0.39
SNRNP25-206ENST00000481947 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
SNRNP25-206ENST00000481947 FOXD1Q16676 465 aa17.46■□□□□ 0.39
SNRNP25-206ENST00000481947 ANKRD30BQ9BXX2 1392 aa17.45■□□□□ 0.38
SNRNP25-206ENST00000481947 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
SNRNP25-206ENST00000481947 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
SNRNP25-206ENST00000481947 SPHKAPQ2M3C7 1700 aa17.42■□□□□ 0.38
SNRNP25-206ENST00000481947 WASHC2CQ9Y4E1 1318 aa17.42■□□□□ 0.38
SNRNP25-206ENST00000481947 PLA2R1Q13018 1463 aa17.4■□□□□ 0.38
SNRNP25-206ENST00000481947 RPRD2Q5VT52 1461 aaKnown RBP17.4■□□□□ 0.38
SNRNP25-206ENST00000481947 ARID4BQ4LE39 1312 aaPredicted RBP17.4■□□□□ 0.38
SNRNP25-206ENST00000481947 ARHGAP31Q2M1Z3 1444 aa17.39■□□□□ 0.38
SNRNP25-206ENST00000481947 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
SNRNP25-206ENST00000481947 PTPRTO14522 1441 aa17.38■□□□□ 0.37
SNRNP25-206ENST00000481947 NPATQ14207 1427 aa17.38■□□□□ 0.37
SNRNP25-206ENST00000481947 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
SNRNP25-206ENST00000481947 MLECQ14165 292 aa17.38■□□□□ 0.37
SNRNP25-206ENST00000481947 TRPM2O94759 1503 aa17.37■□□□□ 0.37
SNRNP25-206ENST00000481947 MROH2AA6NES4 1674 aa17.37■□□□□ 0.37
SNRNP25-206ENST00000481947 FER1L4A9Z1Z3 1794 aa17.36■□□□□ 0.37
SNRNP25-206ENST00000481947 PREX1Q8TCU6 1659 aa17.35■□□□□ 0.37
SNRNP25-206ENST00000481947 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
SNRNP25-206ENST00000481947 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.37
SNRNP25-206ENST00000481947 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
SNRNP25-206ENST00000481947 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
SNRNP25-206ENST00000481947 CLTCL1P53675 1640 aa17.32■□□□□ 0.36
SNRNP25-206ENST00000481947 NOS1P29475 1434 aa17.32■□□□□ 0.36
SNRNP25-206ENST00000481947 SYNMO15061 1565 aa17.32■□□□□ 0.36
SNRNP25-206ENST00000481947 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
SNRNP25-206ENST00000481947 MADDQ8WXG6 1647 aa17.3■□□□□ 0.36
SNRNP25-206ENST00000481947 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
SNRNP25-206ENST00000481947 SPATA31D1Q6ZQQ2 1576 aa17.29■□□□□ 0.36
SNRNP25-206ENST00000481947 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
SNRNP25-206ENST00000481947 C3P01024 1663 aa17.29■□□□□ 0.36
SNRNP25-206ENST00000481947 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
SNRNP25-206ENST00000481947 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
SNRNP25-206ENST00000481947 ESF1Q9H501 851 aaKnown RBP17.28■□□□□ 0.36
SNRNP25-206ENST00000481947 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
SNRNP25-206ENST00000481947 RIMS1Q86UR5 1692 aaKnown RBP17.27■□□□□ 0.36
SNRNP25-206ENST00000481947 TONSLQ96HA7 1378 aa17.26■□□□□ 0.35
SNRNP25-206ENST00000481947 KIF1BO60333 1816 aa17.26■□□□□ 0.35
SNRNP25-206ENST00000481947 NEURL4Q96JN8 1562 aa17.25■□□□□ 0.35
SNRNP25-206ENST00000481947 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
SNRNP25-206ENST00000481947 SPATA31E1Q6ZUB1 1445 aa17.23■□□□□ 0.35
SNRNP25-206ENST00000481947 ADGRB3O60242 1522 aa17.21■□□□□ 0.35
SNRNP25-206ENST00000481947 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
SNRNP25-206ENST00000481947 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
SNRNP25-206ENST00000481947 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
SNRNP25-206ENST00000481947 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
SNRNP25-206ENST00000481947 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
SNRNP25-206ENST00000481947 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
SNRNP25-206ENST00000481947 TNRQ92752 1358 aa17.16■□□□□ 0.34
SNRNP25-206ENST00000481947 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
SNRNP25-206ENST00000481947 IDI1Q13907 227 aa17.16■□□□□ 0.34
SNRNP25-206ENST00000481947 KDM5AP29375 1690 aaKnown RBP17.14■□□□□ 0.33
SNRNP25-206ENST00000481947 PPLO60437 1756 aa17.13■□□□□ 0.33
SNRNP25-206ENST00000481947 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
SNRNP25-206ENST00000481947 PTPRMP28827 1452 aa17.12■□□□□ 0.33
SNRNP25-206ENST00000481947 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
SNRNP25-206ENST00000481947 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
SNRNP25-206ENST00000481947 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
SNRNP25-206ENST00000481947 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
SNRNP25-206ENST00000481947 DCAF11Q8TEB1 546 aa17.1■□□□□ 0.33
SNRNP25-206ENST00000481947 NEXMIFQ5QGS0 1516 aa17.1■□□□□ 0.33
SNRNP25-206ENST00000481947 CHGAP10645 457 aaKnown RBP17.09■□□□□ 0.33
SNRNP25-206ENST00000481947 A2ML1A8K2U0 1454 aa17.09■□□□□ 0.33
SNRNP25-206ENST00000481947 MYOM2P54296 1465 aa17.09■□□□□ 0.33
SNRNP25-206ENST00000481947 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.32
SNRNP25-206ENST00000481947 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
SNRNP25-206ENST00000481947 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
SNRNP25-206ENST00000481947 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
SNRNP25-206ENST00000481947 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
SNRNP25-206ENST00000481947 STAC3Q96MF2 364 aa17.06■□□□□ 0.32
SNRNP25-206ENST00000481947 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms