RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 NISCHQ9Y2I1 1504 aa27.94■■■□□ 2.06
SNRNP25-206ENST00000481947 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
SNRNP25-206ENST00000481947 ABCC9O60706 1549 aa23.46■■□□□ 1.35
SNRNP25-206ENST00000481947 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
SNRNP25-206ENST00000481947 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
SNRNP25-206ENST00000481947 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
SNRNP25-206ENST00000481947 DCAF8L2P0C7V8 631 aa23■■□□□ 1.27
SNRNP25-206ENST00000481947 NACADO15069 1562 aa22.96■■□□□ 1.27
SNRNP25-206ENST00000481947 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
SNRNP25-206ENST00000481947 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
SNRNP25-206ENST00000481947 UNC13AQ9UPW8 1703 aa22.42■■□□□ 1.18
SNRNP25-206ENST00000481947 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
SNRNP25-206ENST00000481947 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
SNRNP25-206ENST00000481947 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
SNRNP25-206ENST00000481947 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
SNRNP25-206ENST00000481947 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
SNRNP25-206ENST00000481947 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
SNRNP25-206ENST00000481947 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
SNRNP25-206ENST00000481947 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
SNRNP25-206ENST00000481947 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
SNRNP25-206ENST00000481947 WIZO95785 1651 aa21.37■■□□□ 1.01
SNRNP25-206ENST00000481947 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
SNRNP25-206ENST00000481947 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
SNRNP25-206ENST00000481947 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
SNRNP25-206ENST00000481947 SMARCA2P51531 1590 aa21.27■■□□□ 1
SNRNP25-206ENST00000481947 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
SNRNP25-206ENST00000481947 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
SNRNP25-206ENST00000481947 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
SNRNP25-206ENST00000481947 HMGXB3Q12766 1538 aa21.14■□□□□ 0.98
SNRNP25-206ENST00000481947 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
SNRNP25-206ENST00000481947 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
SNRNP25-206ENST00000481947 CCDC88BA6NC98 1476 aa20.89■□□□□ 0.94
SNRNP25-206ENST00000481947 CFTRP13569 1480 aa20.59■□□□□ 0.89
SNRNP25-206ENST00000481947 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
SNRNP25-206ENST00000481947 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
SNRNP25-206ENST00000481947 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
SNRNP25-206ENST00000481947 NESP48681 1621 aa20.5■□□□□ 0.87
SNRNP25-206ENST00000481947 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
SNRNP25-206ENST00000481947 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
SNRNP25-206ENST00000481947 PDS5BQ9NTI5 1447 aa20.32■□□□□ 0.84
SNRNP25-206ENST00000481947 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
SNRNP25-206ENST00000481947 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
SNRNP25-206ENST00000481947 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
SNRNP25-206ENST00000481947 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
SNRNP25-206ENST00000481947 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
SNRNP25-206ENST00000481947 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
SNRNP25-206ENST00000481947 CUX1P39880 1505 aa20.19■□□□□ 0.82
SNRNP25-206ENST00000481947 TOP2BQ02880 1626 aa20.18■□□□□ 0.82
SNRNP25-206ENST00000481947 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
SNRNP25-206ENST00000481947 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
SNRNP25-206ENST00000481947 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
SNRNP25-206ENST00000481947 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
SNRNP25-206ENST00000481947 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
SNRNP25-206ENST00000481947 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
SNRNP25-206ENST00000481947 THOC2Q8NI27 1593 aaKnown RBP20.09■□□□□ 0.81
SNRNP25-206ENST00000481947 WDR62O43379 1518 aa20.05■□□□□ 0.8
SNRNP25-206ENST00000481947 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
SNRNP25-206ENST00000481947 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
SNRNP25-206ENST00000481947 WDR97A6NE52 1622 aa19.88■□□□□ 0.77
SNRNP25-206ENST00000481947 CUX2O14529 1486 aa19.87■□□□□ 0.77
SNRNP25-206ENST00000481947 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
SNRNP25-206ENST00000481947 SOGA1O94964 1423 aa19.87■□□□□ 0.77
SNRNP25-206ENST00000481947 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
SNRNP25-206ENST00000481947 ABCA10Q8WWZ4 1543 aa19.84■□□□□ 0.77
SNRNP25-206ENST00000481947 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
SNRNP25-206ENST00000481947 IFT140Q96RY7 1462 aa19.8■□□□□ 0.76
SNRNP25-206ENST00000481947 EEA1Q15075 1411 aa19.79■□□□□ 0.76
SNRNP25-206ENST00000481947 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
SNRNP25-206ENST00000481947 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
SNRNP25-206ENST00000481947 FAM9AQ8IZU1 332 aaPredicted RBP19.71■□□□□ 0.75
SNRNP25-206ENST00000481947 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
SNRNP25-206ENST00000481947 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
SNRNP25-206ENST00000481947 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
SNRNP25-206ENST00000481947 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
SNRNP25-206ENST00000481947 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
SNRNP25-206ENST00000481947 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
SNRNP25-206ENST00000481947 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.733e-7■■■■□ 25.3
SNRNP25-206ENST00000481947 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
SNRNP25-206ENST00000481947 IGF1RP08069 1367 aa19.61■□□□□ 0.73
SNRNP25-206ENST00000481947 KIF21BO75037 1637 aa19.58■□□□□ 0.73
SNRNP25-206ENST00000481947 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
SNRNP25-206ENST00000481947 CUL7Q14999 1698 aa19.58■□□□□ 0.72
SNRNP25-206ENST00000481947 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
SNRNP25-206ENST00000481947 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
SNRNP25-206ENST00000481947 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
SNRNP25-206ENST00000481947 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
SNRNP25-206ENST00000481947 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
SNRNP25-206ENST00000481947 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
SNRNP25-206ENST00000481947 LOC105371045A0A1W2PR82 267 aa19.47■□□□□ 0.71
SNRNP25-206ENST00000481947 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
SNRNP25-206ENST00000481947 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
SNRNP25-206ENST00000481947 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
SNRNP25-206ENST00000481947 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
SNRNP25-206ENST00000481947 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
SNRNP25-206ENST00000481947 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
SNRNP25-206ENST00000481947 CHD1O14646 1710 aa19.32■□□□□ 0.68
SNRNP25-206ENST00000481947 UBTFP17480 764 aaKnown RBP19.32■□□□□ 0.68
SNRNP25-206ENST00000481947 CTTNBP2Q8WZ74 1663 aa19.32■□□□□ 0.68
SNRNP25-206ENST00000481947 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
SNRNP25-206ENST00000481947 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms