RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF428Q96B54 188 aa5.69□□□□□ -1.5
SMC6-208ENST00000481708 KIF12Q96FN5 646 aa5.69□□□□□ -1.5
SMC6-208ENST00000481708 GAPVD1Q14C86 1478 aa5.69□□□□□ -1.5
SMC6-208ENST00000481708 PPP1R37O75864 691 aa5.68□□□□□ -1.5
SMC6-208ENST00000481708 MKRN3Q13064 507 aaKnown RBP5.68□□□□□ -1.5
SMC6-208ENST00000481708 IQGAP2Q13576 1575 aa5.68□□□□□ -1.5
SMC6-208ENST00000481708 PREX1Q8TCU6 1659 aa5.68□□□□□ -1.5
SMC6-208ENST00000481708 ARHGEF40Q8TER5 1519 aa5.68□□□□□ -1.5
SMC6-208ENST00000481708 KDM5CP41229 1560 aa5.67□□□□□ -1.5
SMC6-208ENST00000481708 ZMYND10O75800 440 aa5.67□□□□□ -1.5
SMC6-208ENST00000481708 SEMA3EO15041 775 aa5.67□□□□□ -1.5
SMC6-208ENST00000481708 FBXO22Q8NEZ5 403 aa5.67□□□□□ -1.5
SMC6-208ENST00000481708 RSPH6AQ9H0K4 717 aa5.67□□□□□ -1.5
SMC6-208ENST00000481708 EFCAB3Q8N7B9 438 aa5.66□□□□□ -1.5
SMC6-208ENST00000481708 AQRO60306 1485 aaKnown RBP eCLIP5.65□□□□□ -1.51
SMC6-208ENST00000481708 CABP2Q9NPB3 220 aa5.65□□□□□ -1.51
SMC6-208ENST00000481708 PHF8Q9UPP1 1060 aa5.64□□□□□ -1.51
SMC6-208ENST00000481708 LMTK3Q96Q04 1460 aa5.64□□□□□ -1.51
SMC6-208ENST00000481708 IL27Q8NEV9 243 aa5.64□□□□□ -1.51
SMC6-208ENST00000481708 PHF12Q96QT6 1004 aa5.64□□□□□ -1.51
SMC6-208ENST00000481708 PLXNC1O60486 1568 aa5.64□□□□□ -1.51
SMC6-208ENST00000481708 CAMSAP2Q08AD1 1489 aa5.63□□□□□ -1.51
SMC6-208ENST00000481708 RAD54L2Q9Y4B4 1467 aa5.63□□□□□ -1.51
SMC6-208ENST00000481708 TRPC6Q9Y210 931 aa5.62□□□□□ -1.51
SMC6-208ENST00000481708 PAK3O75914 559 aaPredicted RBP5.62□□□□□ -1.51
SMC6-208ENST00000481708 ITSN2Q9NZM3 1697 aa5.62□□□□□ -1.51
SMC6-208ENST00000481708 HECW2Q9P2P5 1572 aa5.62□□□□□ -1.51
SMC6-208ENST00000481708 APBB1O00213 710 aa5.62□□□□□ -1.51
SMC6-208ENST00000481708 MS4A4AQ96JQ5 239 aa5.62□□□□□ -1.51
SMC6-208ENST00000481708 ZRANB1Q9UGI0 708 aa5.62□□□□□ -1.51
SMC6-208ENST00000481708 ARHGEF12Q9NZN5 1544 aa5.61□□□□□ -1.51
SMC6-208ENST00000481708 CD44P16070 742 aaKnown RBP5.61□□□□□ -1.51
SMC6-208ENST00000481708 P3H3Q8IVL6 736 aa5.61□□□□□ -1.51
SMC6-208ENST00000481708 LAMC1P11047 1609 aa5.61□□□□□ -1.51
SMC6-208ENST00000481708 TESPA1A2RU30 521 aaPredicted RBP5.61□□□□□ -1.51
SMC6-208ENST00000481708 RGS22Q8NE09 1264 aa5.61□□□□□ -1.51
SMC6-208ENST00000481708 ONECUT3O60422 494 aaPredicted RBP5.6□□□□□ -1.51
SMC6-208ENST00000481708 NCKAP5LQ9HCH0 1330 aa5.59□□□□□ -1.51
SMC6-208ENST00000481708 CCDC82Q8N4S0 544 aa5.59□□□□□ -1.51
SMC6-208ENST00000481708 SOX12O15370 315 aa5.59□□□□□ -1.51
SMC6-208ENST00000481708 NLRP6P59044 892 aa5.59□□□□□ -1.52
SMC6-208ENST00000481708 ALKQ9UM73 1620 aa5.58□□□□□ -1.52
SMC6-208ENST00000481708 CCDC9Q9Y3X0 531 aaKnown RBP5.58□□□□□ -1.52
SMC6-208ENST00000481708 SOGA1O94964 1423 aa5.58□□□□□ -1.52
SMC6-208ENST00000481708 KIF14Q15058 1648 aa5.58□□□□□ -1.52
SMC6-208ENST00000481708 WDR70Q9NW82 654 aa5.58□□□□□ -1.52
SMC6-208ENST00000481708 KIF21BO75037 1637 aa5.57□□□□□ -1.52
SMC6-208ENST00000481708 AGLP35573 1532 aa5.57□□□□□ -1.52
SMC6-208ENST00000481708 MS4A3Q96HJ5 214 aa5.57□□□□□ -1.52
SMC6-208ENST00000481708 KDM4CQ9H3R0 1056 aa5.57□□□□□ -1.52
SMC6-208ENST00000481708 XIRP1Q702N8 1843 aaKnown RBP5.57□□□□□ -1.52
SMC6-208ENST00000481708 POLR1AO95602 1720 aaPredicted RBP5.57□□□□□ -1.52
SMC6-208ENST00000481708 TMEM106CQ9BVX2 250 aa5.56□□□□□ -1.52
SMC6-208ENST00000481708 CDC42BPBQ9Y5S2 1711 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 PLEKHG3A1L390 1219 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 DEPDC5O75140 1603 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 CLUAP1Q96AJ1 413 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 ZC3H13Q5T200 1668 aaKnown RBP5.55□□□□□ -1.52
SMC6-208ENST00000481708 PREX2Q70Z35 1606 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 C19orf67A6NJJ6 358 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 FAM117AQ9C073 453 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 MTMR7Q9Y216 660 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 INO80Q9ULG1 1556 aaPredicted RBP5.55□□□□□ -1.52
SMC6-208ENST00000481708 ADGBQ8N7X0 1667 aa5.55□□□□□ -1.52
SMC6-208ENST00000481708 PDIA4P13667 645 aaKnown RBP5.54□□□□□ -1.52
SMC6-208ENST00000481708 BARGINQ6ZT62 677 aa5.54□□□□□ -1.52
SMC6-208ENST00000481708 PLB1Q6P1J6 1458 aa5.54□□□□□ -1.52
SMC6-208ENST00000481708 RAPGEF6Q8TEU7 1601 aa5.54□□□□□ -1.52
SMC6-208ENST00000481708 C3P01024 1663 aa5.54□□□□□ -1.52
SMC6-208ENST00000481708 E2F4Q16254 413 aa5.54□□□□□ -1.52
SMC6-208ENST00000481708 LTBP4Q8N2S1 1624 aa5.54□□□□□ -1.52
SMC6-208ENST00000481708 FOXD4L5Q5VV16 416 aaPredicted RBP5.53□□□□□ -1.52
SMC6-208ENST00000481708 FOXD4L4Q8WXT5 416 aaPredicted RBP5.53□□□□□ -1.52
SMC6-208ENST00000481708 PRXQ9BXM0 1461 aa5.53□□□□□ -1.52
SMC6-208ENST00000481708 WDR7Q9Y4E6 1490 aa5.53□□□□□ -1.52
SMC6-208ENST00000481708 ARHGEF1Q92888 912 aaKnown RBP5.53□□□□□ -1.52
SMC6-208ENST00000481708 CRISPLD2Q9H0B8 497 aa5.53□□□□□ -1.52
SMC6-208ENST00000481708 MYO5CQ9NQX4 1742 aa5.53□□□□□ -1.52
SMC6-208ENST00000481708 KCTD17Q8N5Z5 321 aa5.53□□□□□ -1.52
SMC6-208ENST00000481708 NEO1Q92859 1461 aa5.53□□□□□ -1.52
SMC6-208ENST00000481708 PHLDB1Q86UU1 1377 aa5.53□□□□□ -1.52
SMC6-208ENST00000481708 ILDR1Q86SU0 546 aaPredicted RBP5.52□□□□□ -1.53
SMC6-208ENST00000481708 RNF17Q9BXT8 1623 aaKnown RBP5.52□□□□□ -1.53
SMC6-208ENST00000481708 LARP6Q9BRS8 491 aaKnown RBP5.52□□□□□ -1.53
SMC6-208ENST00000481708 ZBTB7CA1YPR0 619 aa5.52□□□□□ -1.53
SMC6-208ENST00000481708 MFSD10Q14728 455 aa5.52□□□□□ -1.53
SMC6-208ENST00000481708 COL17A1Q9UMD9 1497 aaPredicted RBP5.51□□□□□ -1.53
SMC6-208ENST00000481708 TTLL13PA6NNM8 815 aa5.51□□□□□ -1.53
SMC6-208ENST00000481708 MAGI2Q86UL8 1455 aa5.51□□□□□ -1.53
SMC6-208ENST00000481708 CDC42BPAQ5VT25 1732 aa5.51□□□□□ -1.53
SMC6-208ENST00000481708 EFCAB5A4FU69 1503 aa5.5□□□□□ -1.53
SMC6-208ENST00000481708 BMP2KQ9NSY1 1161 aaPredicted RBP5.5□□□□□ -1.53
SMC6-208ENST00000481708 SYNMO15061 1565 aa5.5□□□□□ -1.53
SMC6-208ENST00000481708 TEX14Q8IWB6 1497 aa5.5□□□□□ -1.53
SMC6-208ENST00000481708 CROCC2H7BZ55 1655 aa5.5□□□□□ -1.53
SMC6-208ENST00000481708 EIF2AK4Q9P2K8 1649 aaKnown RBP5.5□□□□□ -1.53
SMC6-208ENST00000481708 GALR2O43603 387 aaPredicted RBP5.49□□□□□ -1.53
SMC6-208ENST00000481708 EVX2Q03828 476 aa5.49□□□□□ -1.53
SMC6-208ENST00000481708 RBM26Q5T8P6 1007 aaKnown RBP5.49□□□□□ -1.53
SMC6-208ENST00000481708 MAST1Q9Y2H9 1570 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms