RNA–Protein interactions for RNA: ENST00000479452.5

EXD3-208, Transcript of exonuclease 3'-5' domain containing 3, human

TSL 1 (best) BASIC

Gene EXD3, Length 962 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXD3-208	ENST00000479452	DAPK1	P53355	1430 aa		32.65	■■■□□ 2.82
EXD3-208	ENST00000479452	SETD1B	Q9UPS6	1966 aa	Known RBP	32.64	■■■□□ 2.82
EXD3-208	ENST00000479452	KIF15	Q9NS87	1388 aa		32.62	■■■□□ 2.81
EXD3-208	ENST00000479452	SHANK2	Q9UPX8	1470 aa		32.61	■■■□□ 2.81
EXD3-208	ENST00000479452	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.6	■■■□□ 2.81
EXD3-208	ENST00000479452	PTPRK	Q15262	1439 aa		32.6	■■■□□ 2.81
EXD3-208	ENST00000479452	ANKRD30A	Q9BXX3	1397 aa		32.59	■■■□□ 2.81
EXD3-208	ENST00000479452	DUOX2	Q9NRD8	1548 aa		32.58	■■■□□ 2.81
EXD3-208	ENST00000479452	KDM5D	Q9BY66	1539 aa		32.56	■■■□□ 2.8
EXD3-208	ENST00000479452	FAM135A	Q9P2D6	1515 aa		32.55	■■■□□ 2.8
EXD3-208	ENST00000479452	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.54	■■■□□ 2.8
EXD3-208	ENST00000479452	DNMT1	P26358	1616 aa	Known RBP	32.53	■■■□□ 2.8
EXD3-208	ENST00000479452	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.52	■■■□□ 2.8
EXD3-208	ENST00000479452	ERBIN	Q96RT1	1412 aa		32.49	■■■□□ 2.79
EXD3-208	ENST00000479452	TNR	Q92752	1358 aa		32.48	■■■□□ 2.79
EXD3-208	ENST00000479452	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.47	■■■□□ 2.79
EXD3-208	ENST00000479452	PZP	P20742	1482 aa		32.47	■■■□□ 2.79
EXD3-208	ENST00000479452	CROCC2	H7BZ55	1655 aa		32.46	■■■□□ 2.79
EXD3-208	ENST00000479452	NCOA1	Q15788	1441 aa		32.45	■■■□□ 2.79
EXD3-208	ENST00000479452	KANK1	Q14678	1352 aa		32.45	■■■□□ 2.78
EXD3-208	ENST00000479452	RNF17	Q9BXT8	1623 aa	Known RBP	32.43	■■■□□ 2.78
EXD3-208	ENST00000479452	ITGAE	P38570	1179 aa		32.4	■■■□□ 2.78
EXD3-208	ENST00000479452	NCKAP5L	Q9HCH0	1330 aa		32.39	■■■□□ 2.78
EXD3-208	ENST00000479452	ABCC3	O15438	1527 aa		32.39	■■■□□ 2.78
EXD3-208	ENST00000479452	PKD2	Q13563	968 aa		32.38	■■■□□ 2.77
EXD3-208	ENST00000479452	CAMSAP1	Q5T5Y3	1602 aa		32.37	■■■□□ 2.77
EXD3-208	ENST00000479452	MYO3A	Q8NEV4	1616 aa		32.37	■■■□□ 2.77
EXD3-208	ENST00000479452	A2ML1	A8K2U0	1454 aa		32.36	■■■□□ 2.77
EXD3-208	ENST00000479452	PTPRT	O14522	1441 aa		32.36	■■■□□ 2.77
EXD3-208	ENST00000479452	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.36	■■■□□ 2.77
EXD3-208	ENST00000479452	ADGRL2	O95490	1459 aa		32.35	■■■□□ 2.77
EXD3-208	ENST00000479452	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.35	■■■□□ 2.77
EXD3-208	ENST00000479452	ZC3H13	Q5T200	1668 aa	Known RBP	32.32	■■■□□ 2.76
EXD3-208	ENST00000479452	CERK	Q8TCT0	537 aa		32.32	■■■□□ 2.76
EXD3-208	ENST00000479452	STRC	Q7RTU9	1775 aa		32.32	■■■□□ 2.76
EXD3-208	ENST00000479452	ANKRD50	Q9ULJ7	1429 aa		32.3	■■■□□ 2.76
EXD3-208	ENST00000479452	MROH1	Q8NDA8	1641 aa		32.29	■■■□□ 2.76
EXD3-208	ENST00000479452	NLRP1	Q9C000	1473 aa		32.29	■■■□□ 2.76
EXD3-208	ENST00000479452	PLA2R1	Q13018	1463 aa		32.29	■■■□□ 2.76
EXD3-208	ENST00000479452	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.28	■■■□□ 2.76	3e-11	■■■■■ 37.1
EXD3-208	ENST00000479452	ZNF142	P52746	1687 aa	Predicted RBP	32.27	■■■□□ 2.76
EXD3-208	ENST00000479452	PRDM15	P57071	1507 aa	Predicted RBP	32.26	■■■□□ 2.76
EXD3-208	ENST00000479452	ANKLE2	Q86XL3	938 aa		32.25	■■■□□ 2.75
EXD3-208	ENST00000479452	ROCK1	Q13464	1354 aa		32.24	■■■□□ 2.75
EXD3-208	ENST00000479452	ARHGAP31	Q2M1Z3	1444 aa		32.24	■■■□□ 2.75
EXD3-208	ENST00000479452	ERVK-7	P63135	1459 aa		32.23	■■■□□ 2.75
EXD3-208	ENST00000479452	CEP152	O94986	1710 aa		32.2	■■■□□ 2.74
EXD3-208	ENST00000479452	SPATA31D1	Q6ZQQ2	1576 aa		32.19	■■■□□ 2.74
EXD3-208	ENST00000479452	UGGT1	Q9NYU2	1555 aa		32.19	■■■□□ 2.74
EXD3-208	ENST00000479452	STAG3	Q9UJ98	1225 aa		32.18	■■■□□ 2.74
EXD3-208	ENST00000479452	DEPDC5	O75140	1603 aa		32.18	■■■□□ 2.74
EXD3-208	ENST00000479452	LMTK2	Q8IWU2	1503 aa		32.13	■■■□□ 2.73
EXD3-208	ENST00000479452	RRBP1	Q9P2E9	1410 aa	Known RBP	32.1	■■■□□ 2.73
EXD3-208	ENST00000479452	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.08	■■■□□ 2.73
EXD3-208	ENST00000479452	VWDE	Q8N2E2	1590 aa		32.08	■■■□□ 2.73
EXD3-208	ENST00000479452	IDI1	Q13907	227 aa		32.05	■■■□□ 2.72
EXD3-208	ENST00000479452	EID1	Q9Y6B2	187 aa		32.05	■■■□□ 2.72
EXD3-208	ENST00000479452	SLC52A1	Q9NWF4	448 aa		32.04	■■■□□ 2.72
EXD3-208	ENST00000479452	NUP155	O75694	1391 aa		32.04	■■■□□ 2.72
EXD3-208	ENST00000479452	CFAP65	Q6ZU64	1925 aa	Known RBP	32.02	■■■□□ 2.72
EXD3-208	ENST00000479452	TXNDC2	Q86VQ3	553 aa		32.02	■■■□□ 2.72
EXD3-208	ENST00000479452	NPHP4	O75161	1426 aa	Predicted RBP	32.01	■■■□□ 2.72
EXD3-208	ENST00000479452	EFCAB6	Q5THR3	1501 aa		32	■■■□□ 2.71
EXD3-208	ENST00000479452	RPRD2	Q5VT52	1461 aa	Known RBP	31.98	■■■□□ 2.71
EXD3-208	ENST00000479452	NOS1	P29475	1434 aa		31.97	■■■□□ 2.71
EXD3-208	ENST00000479452	LTBP4	Q8N2S1	1624 aa		31.97	■■■□□ 2.71
EXD3-208	ENST00000479452	MED14	O60244	1454 aa		31.94	■■■□□ 2.7
EXD3-208	ENST00000479452	UNC13B	O14795	1591 aa		31.93	■■■□□ 2.7
EXD3-208	ENST00000479452	LTK	P29376	864 aa		31.92	■■■□□ 2.7
EXD3-208	ENST00000479452	NEURL4	Q96JN8	1562 aa		31.92	■■■□□ 2.7
EXD3-208	ENST00000479452	POLR1A	O95602	1720 aa	Predicted RBP	31.92	■■■□□ 2.7
EXD3-208	ENST00000479452	TMEM2	Q9UHN6	1383 aa		31.91	■■■□□ 2.7
EXD3-208	ENST00000479452	UBR1	Q8IWV7	1749 aa		31.9	■■■□□ 2.7
EXD3-208	ENST00000479452	SCAF11	Q99590	1463 aa	Known RBP	31.9	■■■□□ 2.7
EXD3-208	ENST00000479452	CHGA	P10645	457 aa	Known RBP	31.89	■■■□□ 2.7
EXD3-208	ENST00000479452	TET3	O43151	1660 aa		31.89	■■■□□ 2.7
EXD3-208	ENST00000479452	HDGF	P51858	240 aa	Known RBP	31.88	■■■□□ 2.69
EXD3-208	ENST00000479452	IQSEC2	Q5JU85	1478 aa		31.88	■■■□□ 2.69
EXD3-208	ENST00000479452	PIK3C2B	O00750	1634 aa		31.87	■■■□□ 2.69
EXD3-208	ENST00000479452	TRIM52	Q96A61	297 aa		31.87	■■■□□ 2.69
EXD3-208	ENST00000479452	SLIT1	O75093	1534 aa		31.86	■■■□□ 2.69
EXD3-208	ENST00000479452	ARHGAP23	Q9P227	1491 aa		31.86	■■■□□ 2.69
EXD3-208	ENST00000479452	BCAN	Q96GW7	911 aa		31.86	■■■□□ 2.69
EXD3-208	ENST00000479452	SYNM	O15061	1565 aa		31.85	■■■□□ 2.69
EXD3-208	ENST00000479452	NAIP	Q13075	1403 aa		31.84	■■■□□ 2.69
EXD3-208	ENST00000479452	UBAP1L	F5GYI3	381 aa		31.83	■■■□□ 2.69
EXD3-208	ENST00000479452	IQGAP3	Q86VI3	1631 aa		31.82	■■■□□ 2.68
EXD3-208	ENST00000479452	PPP1R15A	O75807	674 aa	Predicted RBP	31.8	■■■□□ 2.68
EXD3-208	ENST00000479452	IQGAP1	P46940	1657 aa		31.8	■■■□□ 2.68
EXD3-208	ENST00000479452	GCC2	Q8IWJ2	1684 aa		31.8	■■■□□ 2.68
EXD3-208	ENST00000479452	CPS1	P31327	1500 aa		31.79	■■■□□ 2.68
EXD3-208	ENST00000479452	HFM1	A2PYH4	1435 aa		31.78	■■■□□ 2.68
EXD3-208	ENST00000479452	ADGRB3	O60242	1522 aa		31.77	■■■□□ 2.68
EXD3-208	ENST00000479452	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.75	■■■□□ 2.67
EXD3-208	ENST00000479452	KDM5A	P29375	1690 aa	Known RBP	31.75	■■■□□ 2.67
EXD3-208	ENST00000479452	TOM1	O60784	492 aa		31.72	■■■□□ 2.67
EXD3-208	ENST00000479452	SLC26A8	Q96RN1	970 aa		31.72	■■■□□ 2.67
EXD3-208	ENST00000479452		E9PCH4	1651 aa		31.72	■■■□□ 2.67
EXD3-208	ENST00000479452	DISP3	Q9P2K9	1392 aa		31.7	■■■□□ 2.67
EXD3-208	ENST00000479452	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms