RNA–Protein interactions for RNA: ENST00000478993.5

DDX3X-204, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 1 (best)

Gene DDX3X, Length 3,397 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-204ENST00000478993 PLXNC1O60486 1568 aa12.97□□□□□ -0.33
DDX3X-204ENST00000478993 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
DDX3X-204ENST00000478993 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
DDX3X-204ENST00000478993 B4GALNT3Q6L9W6 998 aa12.96□□□□□ -0.33
DDX3X-204ENST00000478993 MRS2Q9HD23 443 aa12.96□□□□□ -0.33
DDX3X-204ENST00000478993 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.34
DDX3X-204ENST00000478993 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
DDX3X-204ENST00000478993 NUP160Q12769 1436 aa12.95□□□□□ -0.34
DDX3X-204ENST00000478993 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
DDX3X-204ENST00000478993 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
DDX3X-204ENST00000478993 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
DDX3X-204ENST00000478993 MYOM1P52179 1685 aa12.93□□□□□ -0.34
DDX3X-204ENST00000478993 COL17A1Q9UMD9 1497 aaPredicted RBP12.93□□□□□ -0.34
DDX3X-204ENST00000478993 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
DDX3X-204ENST00000478993 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
DDX3X-204ENST00000478993 KIF15Q9NS87 1388 aa12.93□□□□□ -0.34
DDX3X-204ENST00000478993 PRG4Q92954 1404 aaPredicted RBP12.93□□□□□ -0.34
DDX3X-204ENST00000478993 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
DDX3X-204ENST00000478993 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
DDX3X-204ENST00000478993 ZNF644Q9H582 1327 aaPredicted RBP12.92□□□□□ -0.34
DDX3X-204ENST00000478993 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
DDX3X-204ENST00000478993 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
DDX3X-204ENST00000478993 ATP1B4Q9UN42 357 aaPredicted RBP12.91□□□□□ -0.34
DDX3X-204ENST00000478993 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
DDX3X-204ENST00000478993 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
DDX3X-204ENST00000478993 PLA2R1Q13018 1463 aa12.91□□□□□ -0.34
DDX3X-204ENST00000478993 ANKRD50Q9ULJ7 1429 aa12.91□□□□□ -0.34
DDX3X-204ENST00000478993 PER1O15534 1290 aaPredicted RBP12.89□□□□□ -0.35
DDX3X-204ENST00000478993 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
DDX3X-204ENST00000478993 KIAA1210Q9ULL0 1709 aa12.89□□□□□ -0.35
DDX3X-204ENST00000478993 PLB1Q6P1J6 1458 aa12.88□□□□□ -0.35
DDX3X-204ENST00000478993 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
DDX3X-204ENST00000478993 SPHKAPQ2M3C7 1700 aa12.88□□□□□ -0.35
DDX3X-204ENST00000478993 CCDC141Q6ZP82 1450 aa12.87□□□□□ -0.35
DDX3X-204ENST00000478993 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
DDX3X-204ENST00000478993 ABCC2Q92887 1545 aa12.87□□□□□ -0.35
DDX3X-204ENST00000478993 C9orf84Q5VXU9 1444 aa12.86□□□□□ -0.35
DDX3X-204ENST00000478993 CEP152O94986 1710 aa12.86□□□□□ -0.35
DDX3X-204ENST00000478993 ANKRD30AQ9BXX3 1397 aa12.86□□□□□ -0.35
DDX3X-204ENST00000478993 MS4A1P11836 297 aa12.86□□□□□ -0.35
DDX3X-204ENST00000478993 MADDQ8WXG6 1647 aa12.86□□□□□ -0.35
DDX3X-204ENST00000478993 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
DDX3X-204ENST00000478993 RALBP1Q15311 655 aa12.85□□□□□ -0.35
DDX3X-204ENST00000478993 ATP10BO94823 1461 aa12.85□□□□□ -0.35
DDX3X-204ENST00000478993 DEPDC5O75140 1603 aa12.85□□□□□ -0.35
DDX3X-204ENST00000478993 A2MP01023 1474 aa12.84□□□□□ -0.35
DDX3X-204ENST00000478993 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
DDX3X-204ENST00000478993 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
DDX3X-204ENST00000478993 SYNMO15061 1565 aa12.84□□□□□ -0.35
DDX3X-204ENST00000478993 BACH2Q9BYV9 841 aa12.83□□□□□ -0.36
DDX3X-204ENST00000478993 IFT172Q9UG01 1749 aa12.82□□□□□ -0.36
DDX3X-204ENST00000478993 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
DDX3X-204ENST00000478993 TCERG1O14776 1098 aaKnown RBP12.81□□□□□ -0.36
DDX3X-204ENST00000478993 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
DDX3X-204ENST00000478993 WDR7Q9Y4E6 1490 aa12.8□□□□□ -0.36
DDX3X-204ENST00000478993 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
DDX3X-204ENST00000478993 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
DDX3X-204ENST00000478993 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
DDX3X-204ENST00000478993 DUOX2Q9NRD8 1548 aa12.8□□□□□ -0.36
DDX3X-204ENST00000478993 TESK2Q96S53 571 aa12.78□□□□□ -0.36
DDX3X-204ENST00000478993 TTC37Q6PGP7 1564 aa12.77□□□□□ -0.37
DDX3X-204ENST00000478993 PKD2Q13563 968 aa12.77□□□□□ -0.37
DDX3X-204ENST00000478993 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
DDX3X-204ENST00000478993 VWDEQ8N2E2 1590 aa12.77□□□□□ -0.37
DDX3X-204ENST00000478993 ZC3H13Q5T200 1668 aaKnown RBP12.76□□□□□ -0.37
DDX3X-204ENST00000478993 CCDC136Q96JN2 1154 aa12.75□□□□□ -0.37
DDX3X-204ENST00000478993 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
DDX3X-204ENST00000478993 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
DDX3X-204ENST00000478993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDX3X-204ENST00000478993 NLRP13Q86W25 1043 aa12.73□□□□□ -0.37
DDX3X-204ENST00000478993 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
DDX3X-204ENST00000478993 SCAPERQ9BY12 1400 aa12.73□□□□□ -0.37
DDX3X-204ENST00000478993 TRMT2AQ8IZ69 625 aaKnown RBP12.73□□□□□ -0.37
DDX3X-204ENST00000478993 PDE4AP27815 886 aa12.73□□□□□ -0.37
DDX3X-204ENST00000478993 TRPM2O94759 1503 aa12.73□□□□□ -0.37
DDX3X-204ENST00000478993 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
DDX3X-204ENST00000478993 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
DDX3X-204ENST00000478993 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
DDX3X-204ENST00000478993 RCAN3Q9UKA8 241 aa12.72□□□□□ -0.37
DDX3X-204ENST00000478993 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.37
DDX3X-204ENST00000478993 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
DDX3X-204ENST00000478993 USP32Q8NFA0 1604 aa12.71□□□□□ -0.37
DDX3X-204ENST00000478993 NUP155O75694 1391 aa12.71□□□□□ -0.37
DDX3X-204ENST00000478993 NLRP1Q9C000 1473 aa12.71□□□□□ -0.38
DDX3X-204ENST00000478993 PIK3C2GO75747 1445 aa12.71□□□□□ -0.38
DDX3X-204ENST00000478993 ERBINQ96RT1 1412 aa12.71□□□□□ -0.38
DDX3X-204ENST00000478993 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
DDX3X-204ENST00000478993 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
DDX3X-204ENST00000478993 SYCP2Q9BX26 1530 aa12.7□□□□□ -0.38
DDX3X-204ENST00000478993 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
DDX3X-204ENST00000478993 PTPRTO14522 1441 aa12.69□□□□□ -0.38
DDX3X-204ENST00000478993 CARMIL2Q6F5E8 1435 aa12.69□□□□□ -0.38
DDX3X-204ENST00000478993 ARAP3Q8WWN8 1544 aa12.68□□□□□ -0.38
DDX3X-204ENST00000478993 KDM5AP29375 1690 aaKnown RBP12.68□□□□□ -0.38
DDX3X-204ENST00000478993 UBE2Q2Q8WVN8 375 aa12.68□□□□□ -0.38
DDX3X-204ENST00000478993 INO80Q9ULG1 1556 aaPredicted RBP12.68□□□□□ -0.38
DDX3X-204ENST00000478993 TET3O43151 1660 aa12.68□□□□□ -0.38
DDX3X-204ENST00000478993 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
DDX3X-204ENST00000478993 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
DDX3X-204ENST00000478993 CLTCL1P53675 1640 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms