RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.62■■□□□ 1.37
USP11-207ENST00000478596 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
USP11-207ENST00000478596 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
USP11-207ENST00000478596 RNF17Q9BXT8 1623 aaKnown RBP23.61■■□□□ 1.37
USP11-207ENST00000478596 DEPDC5O75140 1603 aa23.6■■□□□ 1.37
USP11-207ENST00000478596 PLEKHH2Q8IVE3 1493 aa23.59■■□□□ 1.37
USP11-207ENST00000478596 GPATCH8Q9UKJ3 1502 aaKnown RBP23.59■■□□□ 1.37
USP11-207ENST00000478596 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
USP11-207ENST00000478596 POTEAQ6S8J7 498 aa23.58■■□□□ 1.37
USP11-207ENST00000478596 PZPP20742 1482 aa23.56■■□□□ 1.36
USP11-207ENST00000478596 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
USP11-207ENST00000478596 SYNMO15061 1565 aa23.56■■□□□ 1.36
USP11-207ENST00000478596 CASKIN1Q8WXD9 1431 aa23.55■■□□□ 1.36
USP11-207ENST00000478596 NLRP1Q9C000 1473 aa23.55■■□□□ 1.36
USP11-207ENST00000478596 ADGBQ8N7X0 1667 aa23.54■■□□□ 1.36
USP11-207ENST00000478596 FAM135AQ9P2D6 1515 aa23.53■■□□□ 1.36
USP11-207ENST00000478596 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
USP11-207ENST00000478596 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
USP11-207ENST00000478596 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
USP11-207ENST00000478596 STRCP1A6NGW2 1772 aa23.51■■□□□ 1.35
USP11-207ENST00000478596 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
USP11-207ENST00000478596 DHX29Q7Z478 1369 aaKnown RBP23.49■■□□□ 1.35
USP11-207ENST00000478596 KDM5DQ9BY66 1539 aa23.48■■□□□ 1.35
USP11-207ENST00000478596 RTEL1-TNFRSF6BF6WH68 1400 aa23.45■■□□□ 1.34
USP11-207ENST00000478596 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
USP11-207ENST00000478596 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
USP11-207ENST00000478596 KIF3BO15066 747 aa23.41■■□□□ 1.34
USP11-207ENST00000478596 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
USP11-207ENST00000478596 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
USP11-207ENST00000478596 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
USP11-207ENST00000478596 FYCO1Q9BQS8 1478 aa23.38■■□□□ 1.33
USP11-207ENST00000478596 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
USP11-207ENST00000478596 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
USP11-207ENST00000478596 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
USP11-207ENST00000478596 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
USP11-207ENST00000478596 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
USP11-207ENST00000478596 XIRP1Q702N8 1843 aaKnown RBP23.29■■□□□ 1.32
USP11-207ENST00000478596 SRCAPQ6ZRS2 3230 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 LTKP29376 864 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
USP11-207ENST00000478596 TMEM94Q12767 1356 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 CCDC141Q6ZP82 1450 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 SLIT1O75093 1534 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 TIAM1Q13009 1591 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 TXNDC2Q86VQ3 553 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 MTUS2Q5JR59 1369 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 JCADQ9P266 1359 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 NCOA2Q15596 1464 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 UBR1Q8IWV7 1749 aa23.2■■□□□ 1.3
USP11-207ENST00000478596 ABCC3O15438 1527 aa23.2■■□□□ 1.3
USP11-207ENST00000478596 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
USP11-207ENST00000478596 MAP3K1Q13233 1512 aa23.16■■□□□ 1.3
USP11-207ENST00000478596 ZNF772Q68DY9 489 aaPredicted RBP23.15■■□□□ 1.3
USP11-207ENST00000478596 EID1Q9Y6B2 187 aa23.15■■□□□ 1.3
USP11-207ENST00000478596 KCNA6P17658 529 aa23.13■■□□□ 1.29
USP11-207ENST00000478596 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
USP11-207ENST00000478596 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
USP11-207ENST00000478596 SPATA31A6Q5VVP1 1343 aa23.09■■□□□ 1.29
USP11-207ENST00000478596 PROSER2Q86WR7 435 aaPredicted RBP23.09■■□□□ 1.29
USP11-207ENST00000478596 PRDM15P57071 1507 aaPredicted RBP23.08■■□□□ 1.29
USP11-207ENST00000478596 LRP6O75581 1613 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 PHLPP1O60346 1717 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 SLAIN2Q9P270 581 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 CAMSAP2Q08AD1 1489 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 EHBP1L1Q8N3D4 1523 aa23.07■■□□□ 1.28
USP11-207ENST00000478596 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
USP11-207ENST00000478596 FGD6Q6ZV73 1430 aa23.06■■□□□ 1.28
USP11-207ENST00000478596 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
USP11-207ENST00000478596 MSH6P52701 1360 aa23.05■■□□□ 1.28
USP11-207ENST00000478596 TSPY4P0CV99 314 aa23.05■■□□□ 1.28
USP11-207ENST00000478596 TSPY10P0CW01 314 aa23.05■■□□□ 1.28
USP11-207ENST00000478596 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
USP11-207ENST00000478596 RXRBP28702 533 aa23.04■■□□□ 1.28
USP11-207ENST00000478596 ARHGEF5Q12774 1597 aa23.04■■□□□ 1.28
USP11-207ENST00000478596 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
USP11-207ENST00000478596 MEX3CQ5U5Q3 659 aaKnown RBP23.03■■□□□ 1.28
USP11-207ENST00000478596 MROH1Q8NDA8 1641 aa23.03■■□□□ 1.28
USP11-207ENST00000478596 ARHGAP31Q2M1Z3 1444 aa23.02■■□□□ 1.28
USP11-207ENST00000478596 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.28
USP11-207ENST00000478596 TET3O43151 1660 aa23.01■■□□□ 1.27
USP11-207ENST00000478596 NWD1Q149M9 1564 aa23■■□□□ 1.27
USP11-207ENST00000478596 SLC26A8Q96RN1 970 aa22.99■■□□□ 1.27
USP11-207ENST00000478596 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
USP11-207ENST00000478596 PIK3C2BO00750 1634 aa22.95■■□□□ 1.26
USP11-207ENST00000478596 CEP152O94986 1710 aa22.95■■□□□ 1.26
USP11-207ENST00000478596 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
USP11-207ENST00000478596 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
USP11-207ENST00000478596 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
USP11-207ENST00000478596 STAG3Q9UJ98 1225 aa22.93■■□□□ 1.26
USP11-207ENST00000478596 SHPRHQ149N8 1683 aa22.91■■□□□ 1.26
USP11-207ENST00000478596 AHDC1Q5TGY3 1603 aaPredicted RBP22.9■■□□□ 1.26
USP11-207ENST00000478596 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
USP11-207ENST00000478596 NCOA3Q9Y6Q9 1424 aa22.89■■□□□ 1.25
USP11-207ENST00000478596 IDI1Q13907 227 aa22.87■■□□□ 1.25
USP11-207ENST00000478596 RGS12O14924 1447 aa22.85■■□□□ 1.25
USP11-207ENST00000478596 DUOX2Q9NRD8 1548 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms