RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RRP7BPQ9NSQ0 103 aa15.73■□□□□ 0.11
HDAC6-222ENST00000478095 GGT6Q6P531 493 aa15.71■□□□□ 0.11
HDAC6-222ENST00000478095 KIF15Q9NS87 1388 aa15.71■□□□□ 0.11
HDAC6-222ENST00000478095 PTPRMP28827 1452 aa15.71■□□□□ 0.1
HDAC6-222ENST00000478095 PTPRKQ15262 1439 aa15.7■□□□□ 0.1
HDAC6-222ENST00000478095 KIF3BO15066 747 aa15.7■□□□□ 0.1
HDAC6-222ENST00000478095 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
HDAC6-222ENST00000478095 ADGBQ8N7X0 1667 aa15.7■□□□□ 0.1
HDAC6-222ENST00000478095 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
HDAC6-222ENST00000478095 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
HDAC6-222ENST00000478095 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.67■□□□□ 0.1
HDAC6-222ENST00000478095 ESF1Q9H501 851 aaKnown RBP15.67■□□□□ 0.1
HDAC6-222ENST00000478095 RIMS1Q86UR5 1692 aaKnown RBP15.67■□□□□ 0.1
HDAC6-222ENST00000478095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.17e-7■■■■□ 20.8
HDAC6-222ENST00000478095 NCOA1Q15788 1441 aa15.66■□□□□ 0.1
HDAC6-222ENST00000478095 DUOX2Q9NRD8 1548 aa15.65■□□□□ 0.1
HDAC6-222ENST00000478095 CEBPAP49715 358 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-222ENST00000478095 ADGRL2O95490 1459 aa15.65■□□□□ 0.1
HDAC6-222ENST00000478095 FER1L4A9Z1Z3 1794 aa15.63■□□□□ 0.09
HDAC6-222ENST00000478095 ERBINQ96RT1 1412 aa15.62■□□□□ 0.09
HDAC6-222ENST00000478095 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
HDAC6-222ENST00000478095 ROCK1Q13464 1354 aa15.6■□□□□ 0.09
HDAC6-222ENST00000478095 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
HDAC6-222ENST00000478095 ANKRD50Q9ULJ7 1429 aa15.59■□□□□ 0.09
HDAC6-222ENST00000478095 ZMYM3Q14202 1370 aa15.58■□□□□ 0.08
HDAC6-222ENST00000478095 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
HDAC6-222ENST00000478095 KDM5DQ9BY66 1539 aa15.57■□□□□ 0.08
HDAC6-222ENST00000478095 CLTCQ00610 1675 aaKnown RBP15.55■□□□□ 0.08
HDAC6-222ENST00000478095 MROH1Q8NDA8 1641 aa15.55■□□□□ 0.08
HDAC6-222ENST00000478095 RNF17Q9BXT8 1623 aaKnown RBP15.55■□□□□ 0.08
HDAC6-222ENST00000478095 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
HDAC6-222ENST00000478095 ABCC3O15438 1527 aa15.53■□□□□ 0.08
HDAC6-222ENST00000478095 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
HDAC6-222ENST00000478095 PRDM15P57071 1507 aaPredicted RBP15.52■□□□□ 0.07
HDAC6-222ENST00000478095 KANK1Q14678 1352 aa15.51■□□□□ 0.07
HDAC6-222ENST00000478095 C3P01024 1663 aa15.51■□□□□ 0.07
HDAC6-222ENST00000478095 FBXO31Q5XUX0 539 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-222ENST00000478095 FAM135AQ9P2D6 1515 aa15.51■□□□□ 0.07
HDAC6-222ENST00000478095 MROH2AA6NES4 1674 aa15.5■□□□□ 0.07
HDAC6-222ENST00000478095 NAIPQ13075 1403 aa15.5■□□□□ 0.07
HDAC6-222ENST00000478095 LMTK3Q96Q04 1460 aa15.49■□□□□ 0.07
HDAC6-222ENST00000478095 PZPP20742 1482 aa15.48■□□□□ 0.07
HDAC6-222ENST00000478095 DEPDC5O75140 1603 aa15.48■□□□□ 0.07
HDAC6-222ENST00000478095 HSPA2P54652 639 aa15.48■□□□□ 0.07
HDAC6-222ENST00000478095 NPATQ14207 1427 aa15.48■□□□□ 0.07
HDAC6-222ENST00000478095 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
HDAC6-222ENST00000478095 UHRF1BP1Q6BDS2 1440 aa15.47■□□□□ 0.07
HDAC6-222ENST00000478095 ZC3H13Q5T200 1668 aaKnown RBP15.45■□□□□ 0.06
HDAC6-222ENST00000478095 TNRQ92752 1358 aa15.45■□□□□ 0.06
HDAC6-222ENST00000478095 VWDEQ8N2E2 1590 aa15.45■□□□□ 0.06
HDAC6-222ENST00000478095 CEP152O94986 1710 aa15.44■□□□□ 0.06
HDAC6-222ENST00000478095 NUP155O75694 1391 aa15.44■□□□□ 0.06
HDAC6-222ENST00000478095 LMTK2Q8IWU2 1503 aa15.43■□□□□ 0.06
HDAC6-222ENST00000478095 CAMSAP1Q5T5Y3 1602 aa15.43■□□□□ 0.06
HDAC6-222ENST00000478095 UNC13BO14795 1591 aa15.43■□□□□ 0.06
HDAC6-222ENST00000478095 ERVK-7P63135 1459 aa15.42■□□□□ 0.06
HDAC6-222ENST00000478095 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-222ENST00000478095 ARHGAP31Q2M1Z3 1444 aa15.42■□□□□ 0.06
HDAC6-222ENST00000478095 GCC2Q8IWJ2 1684 aa15.41■□□□□ 0.06
HDAC6-222ENST00000478095 PREX1Q8TCU6 1659 aa15.41■□□□□ 0.06
HDAC6-222ENST00000478095 EFCAB6Q5THR3 1501 aa15.4■□□□□ 0.06
HDAC6-222ENST00000478095 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
HDAC6-222ENST00000478095 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
HDAC6-222ENST00000478095 MYO3AQ8NEV4 1616 aa15.39■□□□□ 0.05
HDAC6-222ENST00000478095 SPATA31D1Q6ZQQ2 1576 aa15.38■□□□□ 0.05
HDAC6-222ENST00000478095 CEP170BQ9Y4F5 1589 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-222ENST00000478095 IQGAP3Q86VI3 1631 aa15.35■□□□□ 0.05
HDAC6-222ENST00000478095 SETD5Q9C0A6 1442 aa15.35■□□□□ 0.05
HDAC6-222ENST00000478095 A2ML1A8K2U0 1454 aa15.35■□□□□ 0.05
HDAC6-222ENST00000478095 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
HDAC6-222ENST00000478095 TET3O43151 1660 aa15.35■□□□□ 0.05
HDAC6-222ENST00000478095 NLRP1Q9C000 1473 aa15.34■□□□□ 0.05
HDAC6-222ENST00000478095 NOS1P29475 1434 aa15.34■□□□□ 0.05
HDAC6-222ENST00000478095 RPRD2Q5VT52 1461 aaKnown RBP15.33■□□□□ 0.05
HDAC6-222ENST00000478095 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
HDAC6-222ENST00000478095 SETD1BQ9UPS6 1966 aaKnown RBP15.32■□□□□ 0.04
HDAC6-222ENST00000478095 ZNF142P52746 1687 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-222ENST00000478095 SYNMO15061 1565 aa15.31■□□□□ 0.04
HDAC6-222ENST00000478095 PKD2Q13563 968 aa15.3■□□□□ 0.04
HDAC6-222ENST00000478095 IDI1Q13907 227 aa15.3■□□□□ 0.04
HDAC6-222ENST00000478095 NCKAP5LQ9HCH0 1330 aa15.3■□□□□ 0.04
HDAC6-222ENST00000478095 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
HDAC6-222ENST00000478095 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
HDAC6-222ENST00000478095 E9PCH4 1651 aa15.28■□□□□ 0.04
HDAC6-222ENST00000478095 THEMISQ8N1K5 641 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-222ENST00000478095 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.04
HDAC6-222ENST00000478095 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-222ENST00000478095 PLA2R1Q13018 1463 aa15.27■□□□□ 0.03
HDAC6-222ENST00000478095 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
HDAC6-222ENST00000478095 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
HDAC6-222ENST00000478095 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
HDAC6-222ENST00000478095 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
HDAC6-222ENST00000478095 PTPRTO14522 1441 aa15.24■□□□□ 0.03
HDAC6-222ENST00000478095 TRIM26Q12899 539 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-222ENST00000478095 ANKLE2Q86XL3 938 aa15.23■□□□□ 0.03
HDAC6-222ENST00000478095 STRCQ7RTU9 1775 aa15.22■□□□□ 0.03
HDAC6-222ENST00000478095 ADGRB3O60242 1522 aa15.22■□□□□ 0.03
HDAC6-222ENST00000478095 UBR1Q8IWV7 1749 aa15.21■□□□□ 0.03
HDAC6-222ENST00000478095 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.02
HDAC6-222ENST00000478095 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms