RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
ERCC8-205ENST00000477893 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
ERCC8-205ENST00000477893 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
ERCC8-205ENST00000477893 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
ERCC8-205ENST00000477893 CAMSAP2Q08AD1 1489 aa13.05□□□□□ -0.32
ERCC8-205ENST00000477893 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
ERCC8-205ENST00000477893 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
ERCC8-205ENST00000477893 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
ERCC8-205ENST00000477893 SPDYE2Q495Y8 402 aa13.04□□□□□ -0.32
ERCC8-205ENST00000477893 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
ERCC8-205ENST00000477893 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
ERCC8-205ENST00000477893 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
ERCC8-205ENST00000477893 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
ERCC8-205ENST00000477893 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
ERCC8-205ENST00000477893 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
ERCC8-205ENST00000477893 AGLP35573 1532 aa12.99□□□□□ -0.33
ERCC8-205ENST00000477893 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
ERCC8-205ENST00000477893 A2MP01023 1474 aa12.99□□□□□ -0.33
ERCC8-205ENST00000477893 LMTK3Q96Q04 1460 aa12.99□□□□□ -0.33
ERCC8-205ENST00000477893 HSPA2P54652 639 aa12.99□□□□□ -0.33
ERCC8-205ENST00000477893 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
ERCC8-205ENST00000477893 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
ERCC8-205ENST00000477893 GABBR2O75899 941 aa12.97□□□□□ -0.33
ERCC8-205ENST00000477893 PLXNC1O60486 1568 aa12.97□□□□□ -0.33
ERCC8-205ENST00000477893 LHX8Q68G74 356 aa12.96□□□□□ -0.33
ERCC8-205ENST00000477893 GGT6Q6P531 493 aa12.96□□□□□ -0.33
ERCC8-205ENST00000477893 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
ERCC8-205ENST00000477893 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.34
ERCC8-205ENST00000477893 C3P01024 1663 aa12.94□□□□□ -0.34
ERCC8-205ENST00000477893 ZBTB22O15209 634 aa12.94□□□□□ -0.34
ERCC8-205ENST00000477893 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
ERCC8-205ENST00000477893 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
ERCC8-205ENST00000477893 PREX1Q8TCU6 1659 aa12.93□□□□□ -0.34
ERCC8-205ENST00000477893 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
ERCC8-205ENST00000477893 TSPY4P0CV99 314 aa12.92□□□□□ -0.34
ERCC8-205ENST00000477893 TSPY10P0CW01 314 aa12.92□□□□□ -0.34
ERCC8-205ENST00000477893 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
ERCC8-205ENST00000477893 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
ERCC8-205ENST00000477893 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
ERCC8-205ENST00000477893 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
ERCC8-205ENST00000477893 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
ERCC8-205ENST00000477893 KIF3BO15066 747 aa12.9□□□□□ -0.34
ERCC8-205ENST00000477893 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
ERCC8-205ENST00000477893 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
ERCC8-205ENST00000477893 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
ERCC8-205ENST00000477893 ZMYM3Q14202 1370 aa12.88□□□□□ -0.35
ERCC8-205ENST00000477893 MROH2AA6NES4 1674 aa12.87□□□□□ -0.35
ERCC8-205ENST00000477893 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
ERCC8-205ENST00000477893 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
ERCC8-205ENST00000477893 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
ERCC8-205ENST00000477893 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
ERCC8-205ENST00000477893 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
ERCC8-205ENST00000477893 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
ERCC8-205ENST00000477893 CROCC2H7BZ55 1655 aa12.85□□□□□ -0.35
ERCC8-205ENST00000477893 ABCC5O15440 1437 aa12.85□□□□□ -0.35
ERCC8-205ENST00000477893 DAPK1P53355 1430 aa12.84□□□□□ -0.35
ERCC8-205ENST00000477893 KDM5DQ9BY66 1539 aa12.83□□□□□ -0.35
ERCC8-205ENST00000477893 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
ERCC8-205ENST00000477893 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
ERCC8-205ENST00000477893 WASHC2CQ9Y4E1 1318 aa12.83□□□□□ -0.36
ERCC8-205ENST00000477893 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
ERCC8-205ENST00000477893 NPATQ14207 1427 aa12.82□□□□□ -0.36
ERCC8-205ENST00000477893 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
ERCC8-205ENST00000477893 DNMT1P26358 1616 aaKnown RBP12.82□□□□□ -0.36
ERCC8-205ENST00000477893 MYO3AQ8NEV4 1616 aa12.82□□□□□ -0.36
ERCC8-205ENST00000477893 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
ERCC8-205ENST00000477893 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
ERCC8-205ENST00000477893 SHANK2Q9UPX8 1470 aa12.82□□□□□ -0.36
ERCC8-205ENST00000477893 DUOX2Q9NRD8 1548 aa12.8□□□□□ -0.36
ERCC8-205ENST00000477893 FBXO31Q5XUX0 539 aaPredicted RBP12.8□□□□□ -0.36
ERCC8-205ENST00000477893 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
ERCC8-205ENST00000477893 RNF17Q9BXT8 1623 aaKnown RBP12.79□□□□□ -0.36
ERCC8-205ENST00000477893 EIF2AK4Q9P2K8 1649 aaKnown RBP12.79□□□□□ -0.36
ERCC8-205ENST00000477893 CEP170BQ9Y4F5 1589 aaPredicted RBP12.78□□□□□ -0.36
ERCC8-205ENST00000477893 CAMSAP1Q5T5Y3 1602 aa12.78□□□□□ -0.36
ERCC8-205ENST00000477893 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
ERCC8-205ENST00000477893 ABCC3O15438 1527 aa12.78□□□□□ -0.36
ERCC8-205ENST00000477893 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.36
ERCC8-205ENST00000477893 SETD1BQ9UPS6 1966 aaKnown RBP12.77□□□□□ -0.37
ERCC8-205ENST00000477893 TNRQ92752 1358 aa12.77□□□□□ -0.37
ERCC8-205ENST00000477893 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
ERCC8-205ENST00000477893 PZPP20742 1482 aa12.77□□□□□ -0.37
ERCC8-205ENST00000477893 CEP152O94986 1710 aa12.76□□□□□ -0.37
ERCC8-205ENST00000477893 ITGAEP38570 1179 aa12.76□□□□□ -0.37
ERCC8-205ENST00000477893 NCOA1Q15788 1441 aa12.76□□□□□ -0.37
ERCC8-205ENST00000477893 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
ERCC8-205ENST00000477893 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
ERCC8-205ENST00000477893 ZNF142P52746 1687 aaPredicted RBP12.75□□□□□ -0.37
ERCC8-205ENST00000477893 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
ERCC8-205ENST00000477893 ZC3H13Q5T200 1668 aaKnown RBP12.74□□□□□ -0.37
ERCC8-205ENST00000477893 A2ML1A8K2U0 1454 aa12.73□□□□□ -0.37
ERCC8-205ENST00000477893 PRDM15P57071 1507 aaPredicted RBP12.72□□□□□ -0.37
ERCC8-205ENST00000477893 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
ERCC8-205ENST00000477893 ADGRL2O95490 1459 aa12.71□□□□□ -0.38
ERCC8-205ENST00000477893 ERVK-7P63135 1459 aa12.71□□□□□ -0.38
ERCC8-205ENST00000477893 KANK1Q14678 1352 aa12.7□□□□□ -0.38
ERCC8-205ENST00000477893 PTPRTO14522 1441 aa12.7□□□□□ -0.38
ERCC8-205ENST00000477893 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
ERCC8-205ENST00000477893 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
ERCC8-205ENST00000477893 DEPDC5O75140 1603 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms