RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CD109Q6YHK3 1445 aa17.95■□□□□ 0.46
PRPF39-203ENST00000477626 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
PRPF39-203ENST00000477626 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
PRPF39-203ENST00000477626 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
PRPF39-203ENST00000477626 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
PRPF39-203ENST00000477626 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
PRPF39-203ENST00000477626 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
PRPF39-203ENST00000477626 ZC3H13Q5T200 1668 aaKnown RBP17.88■□□□□ 0.45
PRPF39-203ENST00000477626 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
PRPF39-203ENST00000477626 TRPM2O94759 1503 aa17.88■□□□□ 0.45
PRPF39-203ENST00000477626 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
PRPF39-203ENST00000477626 PTPRTO14522 1441 aa17.87■□□□□ 0.45
PRPF39-203ENST00000477626 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
PRPF39-203ENST00000477626 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
PRPF39-203ENST00000477626 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
PRPF39-203ENST00000477626 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
PRPF39-203ENST00000477626 LAMC1P11047 1609 aa17.84■□□□□ 0.45
PRPF39-203ENST00000477626 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
PRPF39-203ENST00000477626 TRPM1Q7Z4N2 1603 aa17.83■□□□□ 0.45
PRPF39-203ENST00000477626 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.44
PRPF39-203ENST00000477626 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.44
PRPF39-203ENST00000477626 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
PRPF39-203ENST00000477626 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
PRPF39-203ENST00000477626 AFAP1Q8N556 730 aa17.8■□□□□ 0.44
PRPF39-203ENST00000477626 A2MP01023 1474 aa17.79■□□□□ 0.44
PRPF39-203ENST00000477626 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
PRPF39-203ENST00000477626 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
PRPF39-203ENST00000477626 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
PRPF39-203ENST00000477626 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
PRPF39-203ENST00000477626 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.44
PRPF39-203ENST00000477626 ABCC3O15438 1527 aa17.77■□□□□ 0.44
PRPF39-203ENST00000477626 AGLP35573 1532 aa17.77■□□□□ 0.43
PRPF39-203ENST00000477626 NUP155O75694 1391 aa17.76■□□□□ 0.43
PRPF39-203ENST00000477626 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
PRPF39-203ENST00000477626 FOXD1Q16676 465 aa17.75■□□□□ 0.43
PRPF39-203ENST00000477626 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
PRPF39-203ENST00000477626 KIAA1210Q9ULL0 1709 aa17.73■□□□□ 0.43
PRPF39-203ENST00000477626 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
PRPF39-203ENST00000477626 SYNMO15061 1565 aa17.73■□□□□ 0.43
PRPF39-203ENST00000477626 YEATS2Q9ULM3 1422 aa17.71■□□□□ 0.43
PRPF39-203ENST00000477626 PPLO60437 1756 aa17.71■□□□□ 0.43
PRPF39-203ENST00000477626 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.42
PRPF39-203ENST00000477626 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 KIF1BO60333 1816 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 PREX1Q8TCU6 1659 aa17.68■□□□□ 0.42
PRPF39-203ENST00000477626 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
PRPF39-203ENST00000477626 PKD2Q13563 968 aa17.68■□□□□ 0.42
PRPF39-203ENST00000477626 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
PRPF39-203ENST00000477626 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRPF39-203ENST00000477626 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
PRPF39-203ENST00000477626 NBPF8Q3BBV2 869 aa17.64■□□□□ 0.42
PRPF39-203ENST00000477626 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.42
PRPF39-203ENST00000477626 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 UGGT1Q9NYU2 1555 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 NOS1P29475 1434 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
PRPF39-203ENST00000477626 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
PRPF39-203ENST00000477626 NPATQ14207 1427 aa17.62■□□□□ 0.41
PRPF39-203ENST00000477626 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
PRPF39-203ENST00000477626 GPRASP1Q5JY77 1395 aa17.61■□□□□ 0.41
PRPF39-203ENST00000477626 MYOM2P54296 1465 aa17.59■□□□□ 0.41
PRPF39-203ENST00000477626 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.41
PRPF39-203ENST00000477626 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
PRPF39-203ENST00000477626 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.41
PRPF39-203ENST00000477626 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
PRPF39-203ENST00000477626 SETD1AO15047 1707 aaKnown RBP17.56■□□□□ 0.4
PRPF39-203ENST00000477626 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
PRPF39-203ENST00000477626 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
PRPF39-203ENST00000477626 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
PRPF39-203ENST00000477626 FAM69CQ0P6D2 419 aa17.55■□□□□ 0.4
PRPF39-203ENST00000477626 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
PRPF39-203ENST00000477626 NEXMIFQ5QGS0 1516 aa17.53■□□□□ 0.4
PRPF39-203ENST00000477626 SETBP1Q9Y6X0 1596 aa17.51■□□□□ 0.39
PRPF39-203ENST00000477626 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
PRPF39-203ENST00000477626 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
PRPF39-203ENST00000477626 MYOM1P52179 1685 aa17.47■□□□□ 0.39
PRPF39-203ENST00000477626 CFAP65Q6ZU64 1925 aaKnown RBP17.47■□□□□ 0.39
PRPF39-203ENST00000477626 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
PRPF39-203ENST00000477626 KIF3BO15066 747 aa17.44■□□□□ 0.38
PRPF39-203ENST00000477626 KANK1Q14678 1352 aa17.43■□□□□ 0.38
PRPF39-203ENST00000477626 NRXN3Q9Y4C0 1643 aa17.43■□□□□ 0.38
PRPF39-203ENST00000477626 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
PRPF39-203ENST00000477626 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 C3P01024 1663 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 ARHGEF28Q8N1W1 1705 aaKnown RBP17.4■□□□□ 0.38
PRPF39-203ENST00000477626 UBR1Q8IWV7 1749 aa17.4■□□□□ 0.38
PRPF39-203ENST00000477626 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
PRPF39-203ENST00000477626 ZFYVE9O95405 1425 aa17.39■□□□□ 0.37
PRPF39-203ENST00000477626 FER1L4A9Z1Z3 1794 aa17.37■□□□□ 0.37
PRPF39-203ENST00000477626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■□□□ 11.5
PRPF39-203ENST00000477626 USP47Q96K76 1375 aa17.36■□□□□ 0.37
PRPF39-203ENST00000477626 CCDC7Q96M83 1385 aa17.35■□□□□ 0.37
PRPF39-203ENST00000477626 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
PRPF39-203ENST00000477626 ADAMTSL3P82987 1691 aa17.34■□□□□ 0.37
PRPF39-203ENST00000477626 MIER1Q8N108 512 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms