RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TTC37Q6PGP7 1564 aa16.97■□□□□ 0.31
RTFDC1-207ENST00000477573 GSE1Q14687 1217 aa16.96■□□□□ 0.31
RTFDC1-207ENST00000477573 ARXQ96QS3 562 aa16.96■□□□□ 0.31
RTFDC1-207ENST00000477573 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.31
RTFDC1-207ENST00000477573 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
RTFDC1-207ENST00000477573 SAMD9LQ8IVG5 1584 aa16.95■□□□□ 0.3
RTFDC1-207ENST00000477573 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
RTFDC1-207ENST00000477573 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
RTFDC1-207ENST00000477573 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
RTFDC1-207ENST00000477573 HNRNPMP52272 730 aaKnown RBP eCLIP16.93■□□□□ 0.3
RTFDC1-207ENST00000477573 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
RTFDC1-207ENST00000477573 KIAA1107Q9UPP5 1409 aa16.91■□□□□ 0.3
RTFDC1-207ENST00000477573 DENND4BO75064 1496 aaPredicted RBP16.91■□□□□ 0.3
RTFDC1-207ENST00000477573 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
RTFDC1-207ENST00000477573 PLCH2O75038 1416 aa16.9■□□□□ 0.3
RTFDC1-207ENST00000477573 EFCAB2Q5VUJ9 269 aa16.89■□□□□ 0.29
RTFDC1-207ENST00000477573 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
RTFDC1-207ENST00000477573 WDR7Q9Y4E6 1490 aa16.87■□□□□ 0.29
RTFDC1-207ENST00000477573 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
RTFDC1-207ENST00000477573 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
RTFDC1-207ENST00000477573 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
RTFDC1-207ENST00000477573 MAST1Q9Y2H9 1570 aa16.87■□□□□ 0.29
RTFDC1-207ENST00000477573 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
RTFDC1-207ENST00000477573 CALD1Q05682 793 aaKnown RBP16.85■□□□□ 0.29
RTFDC1-207ENST00000477573 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
RTFDC1-207ENST00000477573 ANKRD30BQ9BXX2 1392 aa16.85■□□□□ 0.29
RTFDC1-207ENST00000477573 PZPP20742 1482 aa16.85■□□□□ 0.29
RTFDC1-207ENST00000477573 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
RTFDC1-207ENST00000477573 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
RTFDC1-207ENST00000477573 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
RTFDC1-207ENST00000477573 NUP155O75694 1391 aa16.81■□□□□ 0.28
RTFDC1-207ENST00000477573 FOXD1Q16676 465 aa16.81■□□□□ 0.28
RTFDC1-207ENST00000477573 KDM5DQ9BY66 1539 aa16.81■□□□□ 0.28
RTFDC1-207ENST00000477573 ABCC1P33527 1531 aa16.8■□□□□ 0.28
RTFDC1-207ENST00000477573 PLXNC1O60486 1568 aa16.79■□□□□ 0.28
RTFDC1-207ENST00000477573 ASXL2Q76L83 1435 aa16.78■□□□□ 0.28
RTFDC1-207ENST00000477573 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
RTFDC1-207ENST00000477573 PRDM4Q9UKN5 801 aa16.78■□□□□ 0.28
RTFDC1-207ENST00000477573 PKD2Q13563 968 aa16.78■□□□□ 0.28
RTFDC1-207ENST00000477573 ARHGEF12Q9NZN5 1544 aa16.76■□□□□ 0.27
RTFDC1-207ENST00000477573 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
RTFDC1-207ENST00000477573 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
RTFDC1-207ENST00000477573 FANCAO15360 1455 aa16.73■□□□□ 0.27
RTFDC1-207ENST00000477573 RTEL1-TNFRSF6BF6WH68 1400 aa16.72■□□□□ 0.27
RTFDC1-207ENST00000477573 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
RTFDC1-207ENST00000477573 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
RTFDC1-207ENST00000477573 TRAPPC8Q9Y2L5 1435 aa16.71■□□□□ 0.27
RTFDC1-207ENST00000477573 UNC13BO14795 1591 aa16.71■□□□□ 0.27
RTFDC1-207ENST00000477573 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
RTFDC1-207ENST00000477573 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
RTFDC1-207ENST00000477573 TEX14Q8IWB6 1497 aa16.7■□□□□ 0.26
RTFDC1-207ENST00000477573 LAS1LQ9Y4W2 734 aaKnown RBP16.7■□□□□ 0.26
RTFDC1-207ENST00000477573 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
RTFDC1-207ENST00000477573 PDCL3Q9H2J4 239 aa16.68■□□□□ 0.26
RTFDC1-207ENST00000477573 B4GALNT3Q6L9W6 998 aa16.68■□□□□ 0.26
RTFDC1-207ENST00000477573 NAP1L5Q96NT1 182 aaPredicted RBP16.68■□□□□ 0.26
RTFDC1-207ENST00000477573 ANP32CO43423 234 aa16.67■□□□□ 0.26
RTFDC1-207ENST00000477573 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
RTFDC1-207ENST00000477573 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
RTFDC1-207ENST00000477573 CFAP74Q9C0B2 1584 aa16.65■□□□□ 0.26
RTFDC1-207ENST00000477573 IQGAP3Q86VI3 1631 aa16.65■□□□□ 0.26
RTFDC1-207ENST00000477573 ZFYVE16Q7Z3T8 1539 aa16.65■□□□□ 0.26
RTFDC1-207ENST00000477573 PNNQ9H307 717 aaKnown RBP16.65■□□□□ 0.26
RTFDC1-207ENST00000477573 EIF4G2P78344 907 aaKnown RBP eCLIP16.64■□□□□ 0.25
RTFDC1-207ENST00000477573 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
RTFDC1-207ENST00000477573 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
RTFDC1-207ENST00000477573 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-207ENST00000477573 MAGI2Q86UL8 1455 aa16.64■□□□□ 0.25
RTFDC1-207ENST00000477573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.252e-8■■■□□ 19
RTFDC1-207ENST00000477573 CD109Q6YHK3 1445 aa16.63■□□□□ 0.25
RTFDC1-207ENST00000477573 CLCN1P35523 988 aa16.62■□□□□ 0.25
RTFDC1-207ENST00000477573 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
RTFDC1-207ENST00000477573 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
RTFDC1-207ENST00000477573 IPO4Q8TEX9 1081 aaKnown RBP16.62■□□□□ 0.25
RTFDC1-207ENST00000477573 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
RTFDC1-207ENST00000477573 DCAF11Q8TEB1 546 aa16.61■□□□□ 0.25
RTFDC1-207ENST00000477573 BBXQ8WY36 941 aaPredicted RBP16.61■□□□□ 0.25
RTFDC1-207ENST00000477573 INO80Q9ULG1 1556 aaPredicted RBP16.61■□□□□ 0.25
RTFDC1-207ENST00000477573 NCLP19338 710 aaKnown RBP16.61■□□□□ 0.25
RTFDC1-207ENST00000477573 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
RTFDC1-207ENST00000477573 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
RTFDC1-207ENST00000477573 AEBP2Q6ZN18 517 aaPredicted RBP16.59■□□□□ 0.25
RTFDC1-207ENST00000477573 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
RTFDC1-207ENST00000477573 CCDC144AA2RUR9 1427 aa16.58■□□□□ 0.25
RTFDC1-207ENST00000477573 NBPF8Q3BBV2 869 aa16.58■□□□□ 0.25
RTFDC1-207ENST00000477573 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.25
RTFDC1-207ENST00000477573 RGS3P49796 1198 aa16.57■□□□□ 0.24
RTFDC1-207ENST00000477573 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-207ENST00000477573 GTF2E1P29083 439 aaPredicted RBP16.56■□□□□ 0.24
RTFDC1-207ENST00000477573 HNRNPUQ00839 825 aaKnown RBP eCLIP16.56■□□□□ 0.24
RTFDC1-207ENST00000477573 UHRF1BP1Q6BDS2 1440 aa16.55■□□□□ 0.24
RTFDC1-207ENST00000477573 KANK1Q14678 1352 aa16.55■□□□□ 0.24
RTFDC1-207ENST00000477573 TPM2P07951 284 aa16.55■□□□□ 0.24
RTFDC1-207ENST00000477573 ATP10AO60312 1499 aa16.54■□□□□ 0.24
RTFDC1-207ENST00000477573 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-207ENST00000477573 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
RTFDC1-207ENST00000477573 DHX29Q7Z478 1369 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-207ENST00000477573 DEPDC5O75140 1603 aa16.54■□□□□ 0.24
RTFDC1-207ENST00000477573 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
RTFDC1-207ENST00000477573 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms