RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 NPATQ14207 1427 aa20.53■□□□□ 0.88
ACTN4-205ENST00000477174 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
ACTN4-205ENST00000477174 FAM135AQ9P2D6 1515 aa20.52■□□□□ 0.87
ACTN4-205ENST00000477174 HSPA2P54652 639 aa20.51■□□□□ 0.87
ACTN4-205ENST00000477174 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
ACTN4-205ENST00000477174 CROCC2H7BZ55 1655 aa20.51■□□□□ 0.87
ACTN4-205ENST00000477174 ADGRL2O95490 1459 aa20.5■□□□□ 0.87
ACTN4-205ENST00000477174 C3P01024 1663 aa20.5■□□□□ 0.87
ACTN4-205ENST00000477174 UHRF1BP1Q6BDS2 1440 aa20.5■□□□□ 0.87
ACTN4-205ENST00000477174 PTPRKQ15262 1439 aa20.49■□□□□ 0.87
ACTN4-205ENST00000477174 EIF2AK4Q9P2K8 1649 aaKnown RBP20.48■□□□□ 0.87
ACTN4-205ENST00000477174 CLTCQ00610 1675 aaKnown RBP20.48■□□□□ 0.87
ACTN4-205ENST00000477174 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
ACTN4-205ENST00000477174 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
ACTN4-205ENST00000477174 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
ACTN4-205ENST00000477174 ITGAEP38570 1179 aa20.46■□□□□ 0.87
ACTN4-205ENST00000477174 RNF17Q9BXT8 1623 aaKnown RBP20.45■□□□□ 0.87
ACTN4-205ENST00000477174 FBXO31Q5XUX0 539 aaPredicted RBP20.45■□□□□ 0.86
ACTN4-205ENST00000477174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.861e-7■□□□□ 8.1
ACTN4-205ENST00000477174 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
ACTN4-205ENST00000477174 PREX1Q8TCU6 1659 aa20.43■□□□□ 0.86
ACTN4-205ENST00000477174 KANK1Q14678 1352 aa20.43■□□□□ 0.86
ACTN4-205ENST00000477174 PZPP20742 1482 aa20.43■□□□□ 0.86
ACTN4-205ENST00000477174 ABCC3O15438 1527 aa20.41■□□□□ 0.86
ACTN4-205ENST00000477174 TNRQ92752 1358 aa20.39■□□□□ 0.85
ACTN4-205ENST00000477174 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
ACTN4-205ENST00000477174 MROH1Q8NDA8 1641 aa20.38■□□□□ 0.85
ACTN4-205ENST00000477174 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
ACTN4-205ENST00000477174 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
ACTN4-205ENST00000477174 ZC3H13Q5T200 1668 aaKnown RBP20.35■□□□□ 0.85
ACTN4-205ENST00000477174 DEPDC5O75140 1603 aa20.33■□□□□ 0.84
ACTN4-205ENST00000477174 A2ML1A8K2U0 1454 aa20.31■□□□□ 0.84
ACTN4-205ENST00000477174 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
ACTN4-205ENST00000477174 LMTK2Q8IWU2 1503 aa20.31■□□□□ 0.84
ACTN4-205ENST00000477174 VWDEQ8N2E2 1590 aa20.3■□□□□ 0.84
ACTN4-205ENST00000477174 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
ACTN4-205ENST00000477174 PKD2Q13563 968 aa20.29■□□□□ 0.84
ACTN4-205ENST00000477174 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
ACTN4-205ENST00000477174 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
ACTN4-205ENST00000477174 SPATA31D1Q6ZQQ2 1576 aa20.27■□□□□ 0.84
ACTN4-205ENST00000477174 MYO3AQ8NEV4 1616 aa20.27■□□□□ 0.83
ACTN4-205ENST00000477174 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
ACTN4-205ENST00000477174 PLA2R1Q13018 1463 aa20.25■□□□□ 0.83
ACTN4-205ENST00000477174 NUP155O75694 1391 aa20.25■□□□□ 0.83
ACTN4-205ENST00000477174 NCKAP5LQ9HCH0 1330 aa20.25■□□□□ 0.83
ACTN4-205ENST00000477174 CEP152O94986 1710 aa20.24■□□□□ 0.83
ACTN4-205ENST00000477174 PTPRTO14522 1441 aa20.24■□□□□ 0.83
ACTN4-205ENST00000477174 ZNF142P52746 1687 aaPredicted RBP20.23■□□□□ 0.83
ACTN4-205ENST00000477174 NAIPQ13075 1403 aa20.23■□□□□ 0.83
ACTN4-205ENST00000477174 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
ACTN4-205ENST00000477174 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
ACTN4-205ENST00000477174 SLC52A1Q9NWF4 448 aa20.22■□□□□ 0.83
ACTN4-205ENST00000477174 HFM1A2PYH4 1435 aa20.21■□□□□ 0.83
ACTN4-205ENST00000477174 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
ACTN4-205ENST00000477174 IDI1Q13907 227 aa20.2■□□□□ 0.82
ACTN4-205ENST00000477174 UGGT1Q9NYU2 1555 aa20.2■□□□□ 0.82
ACTN4-205ENST00000477174 NOS1P29475 1434 aa20.19■□□□□ 0.82
ACTN4-205ENST00000477174 EFCAB6Q5THR3 1501 aa20.19■□□□□ 0.82
ACTN4-205ENST00000477174 UNC13BO14795 1591 aa20.19■□□□□ 0.82
ACTN4-205ENST00000477174 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
ACTN4-205ENST00000477174 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
ACTN4-205ENST00000477174 TET3O43151 1660 aa20.14■□□□□ 0.81
ACTN4-205ENST00000477174 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
ACTN4-205ENST00000477174 IQGAP3Q86VI3 1631 aa20.13■□□□□ 0.81
ACTN4-205ENST00000477174 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
ACTN4-205ENST00000477174 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
ACTN4-205ENST00000477174 EID1Q9Y6B2 187 aa20.11■□□□□ 0.81
ACTN4-205ENST00000477174 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
ACTN4-205ENST00000477174 TMEM2Q9UHN6 1383 aa20.08■□□□□ 0.81
ACTN4-205ENST00000477174 SYNMO15061 1565 aa20.08■□□□□ 0.81
ACTN4-205ENST00000477174 MED14O60244 1454 aa20.08■□□□□ 0.81
ACTN4-205ENST00000477174 LTKP29376 864 aa20.08■□□□□ 0.81
ACTN4-205ENST00000477174 GCC2Q8IWJ2 1684 aa20.07■□□□□ 0.8
ACTN4-205ENST00000477174 ARHGAP23Q9P227 1491 aa20.06■□□□□ 0.8
ACTN4-205ENST00000477174 NPHP4O75161 1426 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-205ENST00000477174 HDGFP51858 240 aaKnown RBP20.06■□□□□ 0.8
ACTN4-205ENST00000477174 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
ACTN4-205ENST00000477174 SLIT1O75093 1534 aa20.06■□□□□ 0.8
ACTN4-205ENST00000477174 UBR1Q8IWV7 1749 aa20.05■□□□□ 0.8
ACTN4-205ENST00000477174 FBXO41Q8TF61 875 aa20.04■□□□□ 0.8
ACTN4-205ENST00000477174 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
ACTN4-205ENST00000477174 E9PCH4 1651 aa20.03■□□□□ 0.8
ACTN4-205ENST00000477174 ZNF335Q9H4Z2 1342 aaPredicted RBP20.03■□□□□ 0.8
ACTN4-205ENST00000477174 PIK3C2BO00750 1634 aa20.03■□□□□ 0.8
ACTN4-205ENST00000477174 ILDR1Q86SU0 546 aaPredicted RBP20.03■□□□□ 0.8
ACTN4-205ENST00000477174 NEURL4Q96JN8 1562 aa20.03■□□□□ 0.8
ACTN4-205ENST00000477174 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
ACTN4-205ENST00000477174 KDM5AP29375 1690 aaKnown RBP20.02■□□□□ 0.8
ACTN4-205ENST00000477174 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
ACTN4-205ENST00000477174 ADGRB3O60242 1522 aa19.99■□□□□ 0.79
ACTN4-205ENST00000477174 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.99■□□□□ 0.79
ACTN4-205ENST00000477174 MPHOSPH9Q99550 1183 aa19.99■□□□□ 0.79
ACTN4-205ENST00000477174 LTBP4Q8N2S1 1624 aa19.98■□□□□ 0.79
ACTN4-205ENST00000477174 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
ACTN4-205ENST00000477174 HRCP23327 699 aa19.97■□□□□ 0.79
ACTN4-205ENST00000477174 PPP1R15AO75807 674 aaPredicted RBP19.94■□□□□ 0.78
ACTN4-205ENST00000477174 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
ACTN4-205ENST00000477174 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
ACTN4-205ENST00000477174 ZFYVE9O95405 1425 aa19.93■□□□□ 0.78
ACTN4-205ENST00000477174 RIMS2Q9UQ26 1411 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms