RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 CERKQ8TCT0 537 aa22.1■■□□□ 1.13
ABCF3-211ENST00000475728 FAM135AQ9P2D6 1515 aa22.08■■□□□ 1.13
ABCF3-211ENST00000475728 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.13
ABCF3-211ENST00000475728 CHIC2Q9UKJ5 165 aa22.08■■□□□ 1.13
ABCF3-211ENST00000475728 ADGRL2O95490 1459 aa22.06■■□□□ 1.12
ABCF3-211ENST00000475728 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
ABCF3-211ENST00000475728 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
ABCF3-211ENST00000475728 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
ABCF3-211ENST00000475728 CEBPAP49715 358 aaPredicted RBP22.04■■□□□ 1.12
ABCF3-211ENST00000475728 MROH2AA6NES4 1674 aa22.04■■□□□ 1.12
ABCF3-211ENST00000475728 ZMYM3Q14202 1370 aa22.03■■□□□ 1.12
ABCF3-211ENST00000475728 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
ABCF3-211ENST00000475728 WASHC2CQ9Y4E1 1318 aa22.02■■□□□ 1.12
ABCF3-211ENST00000475728 RNF17Q9BXT8 1623 aaKnown RBP22■■□□□ 1.11
ABCF3-211ENST00000475728 KDM5DQ9BY66 1539 aa22■■□□□ 1.11
ABCF3-211ENST00000475728 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
ABCF3-211ENST00000475728 NPATQ14207 1427 aa21.98■■□□□ 1.11
ABCF3-211ENST00000475728 C3P01024 1663 aa21.98■■□□□ 1.11
ABCF3-211ENST00000475728 CLTCQ00610 1675 aaKnown RBP21.98■■□□□ 1.11
ABCF3-211ENST00000475728 ITGAEP38570 1179 aa21.96■■□□□ 1.11
ABCF3-211ENST00000475728 PTPRKQ15262 1439 aa21.96■■□□□ 1.11
ABCF3-211ENST00000475728 KANK1Q14678 1352 aa21.95■■□□□ 1.1
ABCF3-211ENST00000475728 UHRF1BP1Q6BDS2 1440 aa21.95■■□□□ 1.1
ABCF3-211ENST00000475728 ANKRD50Q9ULJ7 1429 aa21.94■■□□□ 1.1
ABCF3-211ENST00000475728 SETD1BQ9UPS6 1966 aaKnown RBP21.93■■□□□ 1.1
ABCF3-211ENST00000475728 ZC3H13Q5T200 1668 aaKnown RBP21.91■■□□□ 1.1
ABCF3-211ENST00000475728 PREX1Q8TCU6 1659 aa21.91■■□□□ 1.1
ABCF3-211ENST00000475728 SPATA31D1Q6ZQQ2 1576 aa21.91■■□□□ 1.1
ABCF3-211ENST00000475728 ABCC3O15438 1527 aa21.9■■□□□ 1.1
ABCF3-211ENST00000475728 PRDM15P57071 1507 aaPredicted RBP21.9■■□□□ 1.1
ABCF3-211ENST00000475728 PZPP20742 1482 aa21.9■■□□□ 1.1
ABCF3-211ENST00000475728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.1
ABCF3-211ENST00000475728 MROH1Q8NDA8 1641 aa21.9■■□□□ 1.1
ABCF3-211ENST00000475728 DEPDC5O75140 1603 aa21.88■■□□□ 1.09
ABCF3-211ENST00000475728 TNRQ92752 1358 aa21.84■■□□□ 1.09
ABCF3-211ENST00000475728 ARHGAP31Q2M1Z3 1444 aa21.82■■□□□ 1.08
ABCF3-211ENST00000475728 FBXO31Q5XUX0 539 aaPredicted RBP21.82■■□□□ 1.08
ABCF3-211ENST00000475728 LMTK2Q8IWU2 1503 aa21.81■■□□□ 1.08
ABCF3-211ENST00000475728 VWDEQ8N2E2 1590 aa21.8■■□□□ 1.08
ABCF3-211ENST00000475728 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
ABCF3-211ENST00000475728 CEP152O94986 1710 aa21.79■■□□□ 1.08
ABCF3-211ENST00000475728 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.08
ABCF3-211ENST00000475728 STRCQ7RTU9 1775 aa21.77■■□□□ 1.08
ABCF3-211ENST00000475728 ERVK-7P63135 1459 aa21.77■■□□□ 1.07
ABCF3-211ENST00000475728 NLRP1Q9C000 1473 aa21.77■■□□□ 1.07
ABCF3-211ENST00000475728 UNC13BO14795 1591 aa21.76■■□□□ 1.07
ABCF3-211ENST00000475728 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
ABCF3-211ENST00000475728 CEP170BQ9Y4F5 1589 aaPredicted RBP21.75■■□□□ 1.07
ABCF3-211ENST00000475728 HFM1A2PYH4 1435 aa21.74■■□□□ 1.07
ABCF3-211ENST00000475728 NAIPQ13075 1403 aa21.74■■□□□ 1.07
ABCF3-211ENST00000475728 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
ABCF3-211ENST00000475728 ZNF142P52746 1687 aaPredicted RBP21.74■■□□□ 1.07
ABCF3-211ENST00000475728 NUP155O75694 1391 aa21.73■■□□□ 1.07
ABCF3-211ENST00000475728 EFCAB6Q5THR3 1501 aa21.72■■□□□ 1.07
ABCF3-211ENST00000475728 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
ABCF3-211ENST00000475728 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
ABCF3-211ENST00000475728 THEMISQ8N1K5 641 aaPredicted RBP21.69■■□□□ 1.06
ABCF3-211ENST00000475728 PLA2R1Q13018 1463 aa21.69■■□□□ 1.06
ABCF3-211ENST00000475728 TET3O43151 1660 aa21.69■■□□□ 1.06
ABCF3-211ENST00000475728 IQGAP3Q86VI3 1631 aa21.67■■□□□ 1.06
ABCF3-211ENST00000475728 PKD2Q13563 968 aa21.66■■□□□ 1.06
ABCF3-211ENST00000475728 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
ABCF3-211ENST00000475728 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
ABCF3-211ENST00000475728 NOS1P29475 1434 aa21.64■■□□□ 1.06
ABCF3-211ENST00000475728 SLC52A1Q9NWF4 448 aa21.63■■□□□ 1.05
ABCF3-211ENST00000475728 PTPRTO14522 1441 aa21.63■■□□□ 1.05
ABCF3-211ENST00000475728 TRIM52Q96A61 297 aa21.61■■□□□ 1.05
ABCF3-211ENST00000475728 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
ABCF3-211ENST00000475728 LTBP4Q8N2S1 1624 aa21.59■■□□□ 1.05
ABCF3-211ENST00000475728 CFAP65Q6ZU64 1925 aaKnown RBP21.59■■□□□ 1.05
ABCF3-211ENST00000475728 ANKLE2Q86XL3 938 aa21.59■■□□□ 1.05
ABCF3-211ENST00000475728 NCKAP5LQ9HCH0 1330 aa21.58■■□□□ 1.05
ABCF3-211ENST00000475728 IDI1Q13907 227 aa21.57■■□□□ 1.04
ABCF3-211ENST00000475728 SYNMO15061 1565 aa21.57■■□□□ 1.04
ABCF3-211ENST00000475728 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
ABCF3-211ENST00000475728 E9PCH4 1651 aa21.55■■□□□ 1.04
ABCF3-211ENST00000475728 KDM5AP29375 1690 aaKnown RBP21.53■■□□□ 1.04
ABCF3-211ENST00000475728 UBR1Q8IWV7 1749 aa21.52■■□□□ 1.04
ABCF3-211ENST00000475728 PIK3C2BO00750 1634 aa21.52■■□□□ 1.04
ABCF3-211ENST00000475728 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
ABCF3-211ENST00000475728 EID1Q9Y6B2 187 aa21.52■■□□□ 1.04
ABCF3-211ENST00000475728 IQSEC2Q5JU85 1478 aa21.5■■□□□ 1.03
ABCF3-211ENST00000475728 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
ABCF3-211ENST00000475728 SLIT1O75093 1534 aa21.5■■□□□ 1.03
ABCF3-211ENST00000475728 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
ABCF3-211ENST00000475728 ARHGAP23Q9P227 1491 aa21.49■■□□□ 1.03
ABCF3-211ENST00000475728 MED14O60244 1454 aa21.48■■□□□ 1.03
ABCF3-211ENST00000475728 POLR1AO95602 1720 aaPredicted RBP21.48■■□□□ 1.03
ABCF3-211ENST00000475728 SCAF11Q99590 1463 aaKnown RBP21.47■■□□□ 1.03
ABCF3-211ENST00000475728 HDGFP51858 240 aaKnown RBP21.47■■□□□ 1.03
ABCF3-211ENST00000475728 TXNDC2Q86VQ3 553 aa21.47■■□□□ 1.03
ABCF3-211ENST00000475728 NPHP4O75161 1426 aaPredicted RBP21.46■■□□□ 1.03
ABCF3-211ENST00000475728 NEURL4Q96JN8 1562 aa21.45■■□□□ 1.02
ABCF3-211ENST00000475728 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
ABCF3-211ENST00000475728 CHGAP10645 457 aaKnown RBP21.44■■□□□ 1.02
ABCF3-211ENST00000475728 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
ABCF3-211ENST00000475728 HRCP23327 699 aa21.43■■□□□ 1.02
ABCF3-211ENST00000475728 MPHOSPH9Q99550 1183 aa21.43■■□□□ 1.02
ABCF3-211ENST00000475728 SPHKAPQ2M3C7 1700 aa21.43■■□□□ 1.02
ABCF3-211ENST00000475728 TRPM2O94759 1503 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms