RNA–Protein interactions for RNA: ENST00000475087.5

COCH-205, Transcript of cochlin, humanhuman

TSL 1 (best) BASIC

Gene COCH, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-205ENST00000475087 NUP155O75694 1391 aa31.22■■■□□ 2.59
COCH-205ENST00000475087 DHX57Q6P158 1386 aaKnown RBP31.22■■■□□ 2.59
COCH-205ENST00000475087 DEPDC5O75140 1603 aa31.22■■■□□ 2.59
COCH-205ENST00000475087 KDM5DQ9BY66 1539 aa31.2■■■□□ 2.59
COCH-205ENST00000475087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.19■■■□□ 2.58
COCH-205ENST00000475087 RNF17Q9BXT8 1623 aaKnown RBP31.19■■■□□ 2.58
COCH-205ENST00000475087 SIGLEC1Q9BZZ2 1709 aa31.17■■■□□ 2.58
COCH-205ENST00000475087 MROH1Q8NDA8 1641 aa31.16■■■□□ 2.58
COCH-205ENST00000475087 PZPP20742 1482 aa31.16■■■□□ 2.58
COCH-205ENST00000475087 MPHOSPH9Q99550 1183 aa31.16■■■□□ 2.58
COCH-205ENST00000475087 PRDM15P57071 1507 aaPredicted RBP31.15■■■□□ 2.58
COCH-205ENST00000475087 GGT6Q6P531 493 aa31.14■■■□□ 2.57
COCH-205ENST00000475087 CCER1Q8TC90 406 aaPredicted RBP31.13■■■□□ 2.57
COCH-205ENST00000475087 SLC4A1APQ9BWU0 796 aaKnown RBP31.12■■■□□ 2.57
COCH-205ENST00000475087 KANK1Q14678 1352 aa31.12■■■□□ 2.57
COCH-205ENST00000475087 IQGAP3Q86VI3 1631 aa31.12■■■□□ 2.57
COCH-205ENST00000475087 VWDEQ8N2E2 1590 aa31.11■■■□□ 2.57
COCH-205ENST00000475087 FAM135AQ9P2D6 1515 aa31.11■■■□□ 2.57
COCH-205ENST00000475087 ARID4BQ4LE39 1312 aaPredicted RBP31.05■■■□□ 2.56
COCH-205ENST00000475087 PPP6R1Q9UPN7 881 aa31.03■■■□□ 2.56
COCH-205ENST00000475087 PKD2Q13563 968 aa31.02■■■□□ 2.56
COCH-205ENST00000475087 LMTK2Q8IWU2 1503 aa31.01■■■□□ 2.56
COCH-205ENST00000475087 WASHC2CQ9Y4E1 1318 aa31■■■□□ 2.55
COCH-205ENST00000475087 CLSPNQ9HAW4 1339 aa30.99■■■□□ 2.55
COCH-205ENST00000475087 MLECQ14165 292 aa30.99■■■□□ 2.55
COCH-205ENST00000475087 ABCC3O15438 1527 aa30.98■■■□□ 2.55
COCH-205ENST00000475087 TET3O43151 1660 aa30.97■■■□□ 2.55
COCH-205ENST00000475087 FOXD1Q16676 465 aa30.96■■■□□ 2.55
COCH-205ENST00000475087 CEP152O94986 1710 aa30.95■■■□□ 2.55
COCH-205ENST00000475087 ZC3H13Q5T200 1668 aaKnown RBP30.95■■■□□ 2.54
COCH-205ENST00000475087 EFCAB6Q5THR3 1501 aa30.91■■■□□ 2.54
COCH-205ENST00000475087 E9PCH4 1651 aa30.89■■■□□ 2.54
COCH-205ENST00000475087 ANKRD30BQ9BXX2 1392 aa30.89■■■□□ 2.54
COCH-205ENST00000475087 CAMSAP1Q5T5Y3 1602 aa30.87■■■□□ 2.53
COCH-205ENST00000475087 ARHGAP31Q2M1Z3 1444 aa30.85■■■□□ 2.53
COCH-205ENST00000475087 ESF1Q9H501 851 aaKnown RBP30.85■■■□□ 2.53
COCH-205ENST00000475087 NPATQ14207 1427 aa30.84■■■□□ 2.53
COCH-205ENST00000475087 RPRD2Q5VT52 1461 aaKnown RBP30.84■■■□□ 2.53
COCH-205ENST00000475087 CLTCQ00610 1675 aaKnown RBP30.84■■■□□ 2.53
COCH-205ENST00000475087 CNTLNQ9NXG0 1405 aa30.82■■■□□ 2.52
COCH-205ENST00000475087 PLA2R1Q13018 1463 aa30.8■■■□□ 2.52
COCH-205ENST00000475087 SIN3AQ96ST3 1273 aa30.79■■■□□ 2.52
COCH-205ENST00000475087 PTPRTO14522 1441 aa30.79■■■□□ 2.52
COCH-205ENST00000475087 ZMYM3Q14202 1370 aa30.76■■■□□ 2.52
COCH-205ENST00000475087 FER1L4A9Z1Z3 1794 aa30.74■■■□□ 2.51
COCH-205ENST00000475087 MROH2AA6NES4 1674 aa30.74■■■□□ 2.51
COCH-205ENST00000475087 ADAMTSL3P82987 1691 aa30.73■■■□□ 2.51
COCH-205ENST00000475087 SPHKAPQ2M3C7 1700 aa30.73■■■□□ 2.51
COCH-205ENST00000475087 TRPM2O94759 1503 aa30.72■■■□□ 2.51
COCH-205ENST00000475087 NEUROD1Q13562 356 aa30.72■■■□□ 2.51
COCH-205ENST00000475087 NOS1P29475 1434 aa30.71■■■□□ 2.51
COCH-205ENST00000475087 MADDQ8WXG6 1647 aa30.69■■■□□ 2.5
COCH-205ENST00000475087 CCDC144AA2RUR9 1427 aa30.69■■■□□ 2.5
COCH-205ENST00000475087 FBXO31Q5XUX0 539 aaPredicted RBP30.67■■■□□ 2.5
COCH-205ENST00000475087 PREX1Q8TCU6 1659 aa30.66■■■□□ 2.5
COCH-205ENST00000475087 ERVK-7P63135 1459 aa30.66■■■□□ 2.5
COCH-205ENST00000475087 CFAP65Q6ZU64 1925 aaKnown RBP30.66■■■□□ 2.5
COCH-205ENST00000475087 ZEB1P37275 1124 aaPredicted RBP30.65■■■□□ 2.5
COCH-205ENST00000475087 SPATA31D1Q6ZQQ2 1576 aa30.63■■■□□ 2.49
COCH-205ENST00000475087 SYNMO15061 1565 aa30.62■■■□□ 2.49
COCH-205ENST00000475087 RIMS1Q86UR5 1692 aaKnown RBP30.61■■■□□ 2.49
COCH-205ENST00000475087 C3P01024 1663 aa30.6■■■□□ 2.49
COCH-205ENST00000475087 CLTCL1P53675 1640 aa30.6■■■□□ 2.49
COCH-205ENST00000475087 CEBPAP49715 358 aaPredicted RBP30.59■■■□□ 2.49
COCH-205ENST00000475087 TIMELESSQ9UNS1 1208 aa30.59■■■□□ 2.49
COCH-205ENST00000475087 UGGT1Q9NYU2 1555 aa30.59■■■□□ 2.49
COCH-205ENST00000475087 SLC52A1Q9NWF4 448 aa30.57■■■□□ 2.48
COCH-205ENST00000475087 PIK3C2BO00750 1634 aa30.55■■■□□ 2.48
COCH-205ENST00000475087 TONSLQ96HA7 1378 aa30.55■■■□□ 2.48
COCH-205ENST00000475087 IDI1Q13907 227 aa30.52■■■□□ 2.48
COCH-205ENST00000475087 TNRQ92752 1358 aa30.51■■■□□ 2.47
COCH-205ENST00000475087 SPATA31E1Q6ZUB1 1445 aa30.5■■■□□ 2.47
COCH-205ENST00000475087 PTPRMP28827 1452 aa30.48■■■□□ 2.47
COCH-205ENST00000475087 PLPPR3Q6T4P5 718 aa30.48■■■□□ 2.47
COCH-205ENST00000475087 L3MBTL2Q969R5 705 aa30.48■■■□□ 2.47
COCH-205ENST00000475087 NEURL4Q96JN8 1562 aa30.47■■■□□ 2.47
COCH-205ENST00000475087 KIF1BO60333 1816 aa30.46■■■□□ 2.47
COCH-205ENST00000475087 KDM4FA0A1W2PPD8 638 aa30.45■■■□□ 2.47
COCH-205ENST00000475087 RGL3Q3MIN7 710 aa30.44■■■□□ 2.46
COCH-205ENST00000475087 ADGRB3O60242 1522 aa30.43■■■□□ 2.46
COCH-205ENST00000475087 CHGAP10645 457 aaKnown RBP30.41■■■□□ 2.46
COCH-205ENST00000475087 NLRP1Q9C000 1473 aa30.4■■■□□ 2.46
COCH-205ENST00000475087 PPP1R15AO75807 674 aaPredicted RBP30.39■■■□□ 2.46
COCH-205ENST00000475087 TMEM131LA2VDJ0 1609 aa30.39■■■□□ 2.45
COCH-205ENST00000475087 DCAF11Q8TEB1 546 aa30.35■■■□□ 2.45
COCH-205ENST00000475087 STAG3Q9UJ98 1225 aa30.34■■■□□ 2.45
COCH-205ENST00000475087 ZNF326Q5BKZ1 582 aaKnown RBP30.33■■■□□ 2.45
COCH-205ENST00000475087 A2ML1A8K2U0 1454 aa30.32■■■□□ 2.44
COCH-205ENST00000475087 MYO3AQ8NEV4 1616 aa30.32■■■□□ 2.44
COCH-205ENST00000475087 KDM5AP29375 1690 aaKnown RBP30.31■■■□□ 2.44
COCH-205ENST00000475087 RPGRIP1LQ68CZ1 1315 aa30.31■■■□□ 2.44
COCH-205ENST00000475087 STAC3Q96MF2 364 aa30.3■■■□□ 2.44
COCH-205ENST00000475087 KDM2AQ9Y2K7 1162 aa30.3■■■□□ 2.44
COCH-205ENST00000475087 SETD1BQ9UPS6 1966 aaKnown RBP30.29■■■□□ 2.44
COCH-205ENST00000475087 MYO5BQ9ULV0 1848 aa30.29■■■□□ 2.44
COCH-205ENST00000475087 UBR1Q8IWV7 1749 aa30.27■■■□□ 2.44
COCH-205ENST00000475087 IFT172Q9UG01 1749 aa30.25■■■□□ 2.43
COCH-205ENST00000475087 UHRF1BP1Q6BDS2 1440 aa30.24■■■□□ 2.43
COCH-205ENST00000475087 CEP170BQ9Y4F5 1589 aaPredicted RBP30.24■■■□□ 2.43
COCH-205ENST00000475087 NEXMIFQ5QGS0 1516 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms