RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 KIDINS220Q9ULH0 1771 aa13.3□□□□□ -0.28
SH3D19-206ENST00000474743 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
SH3D19-206ENST00000474743 AFAP1Q8N556 730 aa13.3□□□□□ -0.28
SH3D19-206ENST00000474743 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
SH3D19-206ENST00000474743 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
SH3D19-206ENST00000474743 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.29
SH3D19-206ENST00000474743 AGLP35573 1532 aa13.27□□□□□ -0.29
SH3D19-206ENST00000474743 SPAG9O60271 1321 aaKnown RBP13.26□□□□□ -0.29
SH3D19-206ENST00000474743 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
SH3D19-206ENST00000474743 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
SH3D19-206ENST00000474743 CCDC141Q6ZP82 1450 aa13.25□□□□□ -0.29
SH3D19-206ENST00000474743 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
SH3D19-206ENST00000474743 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
SH3D19-206ENST00000474743 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
SH3D19-206ENST00000474743 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
SH3D19-206ENST00000474743 MLECQ14165 292 aa13.23□□□□□ -0.29
SH3D19-206ENST00000474743 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
SH3D19-206ENST00000474743 PLXNC1O60486 1568 aa13.23□□□□□ -0.29
SH3D19-206ENST00000474743 HNRNPMP52272 730 aaKnown RBP eCLIP13.22□□□□□ -0.29
SH3D19-206ENST00000474743 ARHGEF5Q12774 1597 aa13.22□□□□□ -0.29
SH3D19-206ENST00000474743 A2MP01023 1474 aa13.21□□□□□ -0.3
SH3D19-206ENST00000474743 MBD5Q9P267 1494 aa13.21□□□□□ -0.3
SH3D19-206ENST00000474743 MYOM3Q5VTT5 1437 aa13.21□□□□□ -0.3
SH3D19-206ENST00000474743 ESF1Q9H501 851 aaKnown RBP13.2□□□□□ -0.3
SH3D19-206ENST00000474743 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
SH3D19-206ENST00000474743 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
SH3D19-206ENST00000474743 MROH2AA6NES4 1674 aa13.19□□□□□ -0.3
SH3D19-206ENST00000474743 PREX1Q8TCU6 1659 aa13.19□□□□□ -0.3
SH3D19-206ENST00000474743 CNTLNQ9NXG0 1405 aa13.19□□□□□ -0.3
SH3D19-206ENST00000474743 ZNF644Q9H582 1327 aaPredicted RBP13.18□□□□□ -0.3
SH3D19-206ENST00000474743 RSPH4AQ5TD94 716 aa13.18□□□□□ -0.3
SH3D19-206ENST00000474743 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
SH3D19-206ENST00000474743 C3P01024 1663 aa13.16□□□□□ -0.3
SH3D19-206ENST00000474743 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
SH3D19-206ENST00000474743 MAST1Q9Y2H9 1570 aa13.15□□□□□ -0.3
SH3D19-206ENST00000474743 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
SH3D19-206ENST00000474743 PTPN23Q9H3S7 1636 aa13.15□□□□□ -0.3
SH3D19-206ENST00000474743 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
SH3D19-206ENST00000474743 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
SH3D19-206ENST00000474743 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
SH3D19-206ENST00000474743 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
SH3D19-206ENST00000474743 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
SH3D19-206ENST00000474743 SHANK2Q9UPX8 1470 aa13.12□□□□□ -0.31
SH3D19-206ENST00000474743 CLCN6P51797 869 aa13.12□□□□□ -0.31
SH3D19-206ENST00000474743 EIF2AK4Q9P2K8 1649 aaKnown RBP13.11□□□□□ -0.31
SH3D19-206ENST00000474743 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
SH3D19-206ENST00000474743 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
SH3D19-206ENST00000474743 DNMT1P26358 1616 aaKnown RBP13.1□□□□□ -0.31
SH3D19-206ENST00000474743 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
SH3D19-206ENST00000474743 KDM5DQ9BY66 1539 aa13.09□□□□□ -0.31
SH3D19-206ENST00000474743 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
SH3D19-206ENST00000474743 NPATQ14207 1427 aa13.08□□□□□ -0.32
SH3D19-206ENST00000474743 POTEMA6NI47 508 aa13.08□□□□□ -0.32
SH3D19-206ENST00000474743 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
SH3D19-206ENST00000474743 ZC3H13Q5T200 1668 aaKnown RBP13.08□□□□□ -0.32
SH3D19-206ENST00000474743 RNF17Q9BXT8 1623 aaKnown RBP13.07□□□□□ -0.32
SH3D19-206ENST00000474743 GGT6Q6P531 493 aa13.07□□□□□ -0.32
SH3D19-206ENST00000474743 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
SH3D19-206ENST00000474743 CEBPAP49715 358 aaPredicted RBP13.06□□□□□ -0.32
SH3D19-206ENST00000474743 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
SH3D19-206ENST00000474743 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
SH3D19-206ENST00000474743 DAPK1P53355 1430 aa13.05□□□□□ -0.32
SH3D19-206ENST00000474743 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
SH3D19-206ENST00000474743 KIF3BO15066 747 aa13.04□□□□□ -0.32
SH3D19-206ENST00000474743 ZMYM3Q14202 1370 aa13.04□□□□□ -0.32
SH3D19-206ENST00000474743 KIF15Q9NS87 1388 aa13.04□□□□□ -0.32
SH3D19-206ENST00000474743 ABCC5O15440 1437 aa13.03□□□□□ -0.32
SH3D19-206ENST00000474743 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
SH3D19-206ENST00000474743 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
SH3D19-206ENST00000474743 ZBTB22O15209 634 aa13.01□□□□□ -0.33
SH3D19-206ENST00000474743 HSPA2P54652 639 aa13.01□□□□□ -0.33
SH3D19-206ENST00000474743 POTEGQ6S5H5 508 aa13.01□□□□□ -0.33
SH3D19-206ENST00000474743 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
SH3D19-206ENST00000474743 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
SH3D19-206ENST00000474743 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
SH3D19-206ENST00000474743 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
SH3D19-206ENST00000474743 PZPP20742 1482 aa13□□□□□ -0.33
SH3D19-206ENST00000474743 PTPRKQ15262 1439 aa13□□□□□ -0.33
SH3D19-206ENST00000474743 ABCC3O15438 1527 aa12.99□□□□□ -0.33
SH3D19-206ENST00000474743 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
SH3D19-206ENST00000474743 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
SH3D19-206ENST00000474743 CEP152O94986 1710 aa12.99□□□□□ -0.33
SH3D19-206ENST00000474743 DEPDC5O75140 1603 aa12.99□□□□□ -0.33
SH3D19-206ENST00000474743 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
SH3D19-206ENST00000474743 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
SH3D19-206ENST00000474743 CAMSAP1Q5T5Y3 1602 aa12.98□□□□□ -0.33
SH3D19-206ENST00000474743 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
SH3D19-206ENST00000474743 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
SH3D19-206ENST00000474743 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
SH3D19-206ENST00000474743 NCOA1Q15788 1441 aa12.95□□□□□ -0.34
SH3D19-206ENST00000474743 KANK1Q14678 1352 aa12.94□□□□□ -0.34
SH3D19-206ENST00000474743 TNRQ92752 1358 aa12.94□□□□□ -0.34
SH3D19-206ENST00000474743 A2ML1A8K2U0 1454 aa12.94□□□□□ -0.34
SH3D19-206ENST00000474743 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
SH3D19-206ENST00000474743 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
SH3D19-206ENST00000474743 NLRP1Q9C000 1473 aa12.93□□□□□ -0.34
SH3D19-206ENST00000474743 POLR1AO95602 1720 aaPredicted RBP12.92□□□□□ -0.34
SH3D19-206ENST00000474743 SPATA31D1Q6ZQQ2 1576 aa12.92□□□□□ -0.34
SH3D19-206ENST00000474743 CHIC2Q9UKJ5 165 aa12.92□□□□□ -0.34
SH3D19-206ENST00000474743 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms