RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 AEBP2Q6ZN18 517 aaPredicted RBP25.57■■□□□ 1.68
SH3D19-206ENST00000474743 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
SH3D19-206ENST00000474743 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
SH3D19-206ENST00000474743 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
SH3D19-206ENST00000474743 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
SH3D19-206ENST00000474743 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
SH3D19-206ENST00000474743 FOXD1Q16676 465 aa20.63■□□□□ 0.89
SH3D19-206ENST00000474743 MSH5O43196 834 aa19.8■□□□□ 0.76
SH3D19-206ENST00000474743 PIAS4Q8N2W9 510 aaPredicted RBP19.06■□□□□ 0.64
SH3D19-206ENST00000474743 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
SH3D19-206ENST00000474743 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
SH3D19-206ENST00000474743 ADRA2BP18089 450 aa18.35■□□□□ 0.53
SH3D19-206ENST00000474743 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
SH3D19-206ENST00000474743 ABCC9O60706 1549 aa18.13■□□□□ 0.49
SH3D19-206ENST00000474743 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.4
SH3D19-206ENST00000474743 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
SH3D19-206ENST00000474743 NACADO15069 1562 aa17.4■□□□□ 0.38
SH3D19-206ENST00000474743 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
SH3D19-206ENST00000474743 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
SH3D19-206ENST00000474743 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
SH3D19-206ENST00000474743 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
SH3D19-206ENST00000474743 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
SH3D19-206ENST00000474743 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
SH3D19-206ENST00000474743 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
SH3D19-206ENST00000474743 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
SH3D19-206ENST00000474743 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
SH3D19-206ENST00000474743 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
SH3D19-206ENST00000474743 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
SH3D19-206ENST00000474743 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
SH3D19-206ENST00000474743 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
SH3D19-206ENST00000474743 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
SH3D19-206ENST00000474743 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
SH3D19-206ENST00000474743 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
SH3D19-206ENST00000474743 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
SH3D19-206ENST00000474743 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
SH3D19-206ENST00000474743 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.2
SH3D19-206ENST00000474743 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
SH3D19-206ENST00000474743 POTEHQ6S545 545 aa16.27■□□□□ 0.2
SH3D19-206ENST00000474743 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
SH3D19-206ENST00000474743 BAZ1AQ9NRL2 1556 aaPredicted RBP16.08■□□□□ 0.16
SH3D19-206ENST00000474743 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
SH3D19-206ENST00000474743 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
SH3D19-206ENST00000474743 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
SH3D19-206ENST00000474743 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
SH3D19-206ENST00000474743 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
SH3D19-206ENST00000474743 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
SH3D19-206ENST00000474743 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
SH3D19-206ENST00000474743 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
SH3D19-206ENST00000474743 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
SH3D19-206ENST00000474743 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
SH3D19-206ENST00000474743 WIZO95785 1651 aa15.74■□□□□ 0.11
SH3D19-206ENST00000474743 ERCC6Q03468 1493 aa15.71■□□□□ 0.11
SH3D19-206ENST00000474743 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
SH3D19-206ENST00000474743 RSF1Q96T23 1441 aaPredicted RBP15.64■□□□□ 0.09
SH3D19-206ENST00000474743 NESP48681 1621 aa15.62■□□□□ 0.09
SH3D19-206ENST00000474743 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
SH3D19-206ENST00000474743 CUX2O14529 1486 aa15.59■□□□□ 0.09
SH3D19-206ENST00000474743 PDS5BQ9NTI5 1447 aa15.54■□□□□ 0.08
SH3D19-206ENST00000474743 KIF21AQ7Z4S6 1674 aa15.53■□□□□ 0.08
SH3D19-206ENST00000474743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.084e-9■■□□□ 13.5
SH3D19-206ENST00000474743 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
SH3D19-206ENST00000474743 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
SH3D19-206ENST00000474743 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
SH3D19-206ENST00000474743 CFTRP13569 1480 aa15.41■□□□□ 0.06
SH3D19-206ENST00000474743 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
SH3D19-206ENST00000474743 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
SH3D19-206ENST00000474743 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
SH3D19-206ENST00000474743 WDR62O43379 1518 aa15.36■□□□□ 0.05
SH3D19-206ENST00000474743 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
SH3D19-206ENST00000474743 DSG3P32926 999 aa15.32■□□□□ 0.04
SH3D19-206ENST00000474743 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
SH3D19-206ENST00000474743 CAPN15O75808 1086 aa15.18■□□□□ 0.02
SH3D19-206ENST00000474743 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
SH3D19-206ENST00000474743 DNMBPQ6XZF7 1577 aa15.12■□□□□ 0.01
SH3D19-206ENST00000474743 SUPT5HO00267 1087 aaKnown RBP15.12■□□□□ 0.01
SH3D19-206ENST00000474743 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
SH3D19-206ENST00000474743 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
SH3D19-206ENST00000474743 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
SH3D19-206ENST00000474743 IFT140Q96RY7 1462 aa15.08■□□□□ 0
SH3D19-206ENST00000474743 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
SH3D19-206ENST00000474743 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
SH3D19-206ENST00000474743 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
SH3D19-206ENST00000474743 TARBP1Q13395 1621 aaKnown RBP14.96□□□□□ -0.01
SH3D19-206ENST00000474743 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
SH3D19-206ENST00000474743 ZNF608Q9ULD9 1512 aaPredicted RBP14.95□□□□□ -0.02
SH3D19-206ENST00000474743 CUX1P39880 1505 aa14.93□□□□□ -0.02
SH3D19-206ENST00000474743 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
SH3D19-206ENST00000474743 FGD5Q6ZNL6 1462 aa14.92□□□□□ -0.02
SH3D19-206ENST00000474743 SOGA1O94964 1423 aa14.88□□□□□ -0.03
SH3D19-206ENST00000474743 RAD54L2Q9Y4B4 1467 aa14.85□□□□□ -0.03
SH3D19-206ENST00000474743 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
SH3D19-206ENST00000474743 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
SH3D19-206ENST00000474743 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.041e-7■■■■■ 30.5
SH3D19-206ENST00000474743 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
SH3D19-206ENST00000474743 CHD1O14646 1710 aa14.82□□□□□ -0.04
SH3D19-206ENST00000474743 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
SH3D19-206ENST00000474743 PBRM1Q86U86 1689 aa14.8□□□□□ -0.04
SH3D19-206ENST00000474743 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
SH3D19-206ENST00000474743 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
SH3D19-206ENST00000474743 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms