RNA–Protein interactions for RNA: ENST00000474194.1

RFWD2-207, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-207ENST00000474194 MROH1Q8NDA8 1641 aa38.27■■■■□ 3.72
RFWD2-207ENST00000474194 CLTCQ00610 1675 aaKnown RBP38.24■■■■□ 3.71
RFWD2-207ENST00000474194 DEPDC5O75140 1603 aa38.23■■■■□ 3.71
RFWD2-207ENST00000474194 CNTLNQ9NXG0 1405 aa38.22■■■■□ 3.71
RFWD2-207ENST00000474194 PPP6R1Q9UPN7 881 aa38.22■■■■□ 3.71
RFWD2-207ENST00000474194 ESF1Q9H501 851 aaKnown RBP38.21■■■■□ 3.71
RFWD2-207ENST00000474194 PRDM15P57071 1507 aaPredicted RBP38.2■■■■□ 3.71
RFWD2-207ENST00000474194 FAM135AQ9P2D6 1515 aa38.2■■■■□ 3.71
RFWD2-207ENST00000474194 GCC2Q8IWJ2 1684 aa38.2■■■■□ 3.71
RFWD2-207ENST00000474194 MROH2AA6NES4 1674 aa38.19■■■■□ 3.7
RFWD2-207ENST00000474194 KDM5DQ9BY66 1539 aa38.18■■■■□ 3.7
RFWD2-207ENST00000474194 AEBP2Q6ZN18 517 aaPredicted RBP38.17■■■■□ 3.7
RFWD2-207ENST00000474194 NAIPQ13075 1403 aa38.16■■■■□ 3.7
RFWD2-207ENST00000474194 C3P01024 1663 aa38.15■■■■□ 3.7
RFWD2-207ENST00000474194 HFM1A2PYH4 1435 aa38.13■■■■□ 3.7
RFWD2-207ENST00000474194 ZC3H13Q5T200 1668 aaKnown RBP38.13■■■■□ 3.69
RFWD2-207ENST00000474194 ABCC3O15438 1527 aa38.12■■■■□ 3.69
RFWD2-207ENST00000474194 CEP152O94986 1710 aa38.11■■■■□ 3.69
RFWD2-207ENST00000474194 WASHC2CQ9Y4E1 1318 aa38.11■■■■□ 3.69
RFWD2-207ENST00000474194 PLPPR3Q6T4P5 718 aa38.1■■■■□ 3.69
RFWD2-207ENST00000474194 UNC13BO14795 1591 aa38.1■■■■□ 3.69
RFWD2-207ENST00000474194 CEBPAP49715 358 aaPredicted RBP38.09■■■■□ 3.69
RFWD2-207ENST00000474194 ZMYM3Q14202 1370 aa38.08■■■■□ 3.69
RFWD2-207ENST00000474194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.08■■■■□ 3.693e-6■□□□□ 8.5
RFWD2-207ENST00000474194 VWDEQ8N2E2 1590 aa38.07■■■■□ 3.69
RFWD2-207ENST00000474194 KANK1Q14678 1352 aa38.03■■■■□ 3.68
RFWD2-207ENST00000474194 CAMSAP1Q5T5Y3 1602 aa38.01■■■■□ 3.68
RFWD2-207ENST00000474194 LMTK2Q8IWU2 1503 aa37.98■■■■□ 3.67
RFWD2-207ENST00000474194 PZPP20742 1482 aa37.96■■■■□ 3.67
RFWD2-207ENST00000474194 IQGAP3Q86VI3 1631 aa37.93■■■■□ 3.66
RFWD2-207ENST00000474194 NPATQ14207 1427 aa37.91■■■■□ 3.66
RFWD2-207ENST00000474194 NUP155O75694 1391 aa37.89■■■■□ 3.66
RFWD2-207ENST00000474194 EFCAB6Q5THR3 1501 aa37.88■■■■□ 3.65
RFWD2-207ENST00000474194 TET3O43151 1660 aa37.88■■■■□ 3.65
RFWD2-207ENST00000474194 SETD1BQ9UPS6 1966 aaKnown RBP37.88■■■■□ 3.65
RFWD2-207ENST00000474194 ARHGAP31Q2M1Z3 1444 aa37.87■■■■□ 3.65
RFWD2-207ENST00000474194 SETD5Q9C0A6 1442 aa37.87■■■■□ 3.65
RFWD2-207ENST00000474194 PREX1Q8TCU6 1659 aa37.85■■■■□ 3.65
RFWD2-207ENST00000474194 FBXO31Q5XUX0 539 aaPredicted RBP37.84■■■■□ 3.65
RFWD2-207ENST00000474194 CFAP65Q6ZU64 1925 aaKnown RBP37.83■■■■□ 3.65
RFWD2-207ENST00000474194 SPATA31D1Q6ZQQ2 1576 aa37.8■■■■□ 3.64
RFWD2-207ENST00000474194 ERVK-7P63135 1459 aa37.8■■■■□ 3.64
RFWD2-207ENST00000474194 LMTK3Q96Q04 1460 aa37.77■■■■□ 3.64
RFWD2-207ENST00000474194 MYO3AQ8NEV4 1616 aa37.77■■■■□ 3.64
RFWD2-207ENST00000474194 RAB3GAP2Q9H2M9 1393 aa37.77■■■■□ 3.64
RFWD2-207ENST00000474194 TNRQ92752 1358 aa37.76■■■■□ 3.64
RFWD2-207ENST00000474194 E9PCH4 1651 aa37.76■■■■□ 3.63
RFWD2-207ENST00000474194 UHRF1BP1Q6BDS2 1440 aa37.74■■■■□ 3.63
RFWD2-207ENST00000474194 TRIM52Q96A61 297 aa37.74■■■■□ 3.63
RFWD2-207ENST00000474194 RPRD2Q5VT52 1461 aaKnown RBP37.73■■■■□ 3.63
RFWD2-207ENST00000474194 TRIM26Q12899 539 aaPredicted RBP37.73■■■■□ 3.63
RFWD2-207ENST00000474194 ZNF142P52746 1687 aaPredicted RBP37.67■■■■□ 3.62
RFWD2-207ENST00000474194 NOS1P29475 1434 aa37.66■■■■□ 3.62
RFWD2-207ENST00000474194 CEP170BQ9Y4F5 1589 aaPredicted RBP37.65■■■■□ 3.62
RFWD2-207ENST00000474194 SYNMO15061 1565 aa37.63■■■■□ 3.62
RFWD2-207ENST00000474194 NLRP1Q9C000 1473 aa37.62■■■■□ 3.61
RFWD2-207ENST00000474194 ACIN1Q9UKV3 1341 aaKnown RBP37.61■■■■□ 3.61
RFWD2-207ENST00000474194 A2ML1A8K2U0 1454 aa37.6■■■■□ 3.61
RFWD2-207ENST00000474194 SLC4A1APQ9BWU0 796 aaKnown RBP37.58■■■■□ 3.61
RFWD2-207ENST00000474194 HSPA2P54652 639 aa37.57■■■■□ 3.6
RFWD2-207ENST00000474194 HRCP23327 699 aa37.56■■■■□ 3.6
RFWD2-207ENST00000474194 SPHKAPQ2M3C7 1700 aa37.54■■■■□ 3.6
RFWD2-207ENST00000474194 PKD2Q13563 968 aa37.53■■■■□ 3.6
RFWD2-207ENST00000474194 MPHOSPH9Q99550 1183 aa37.51■■■■□ 3.6
RFWD2-207ENST00000474194 PIK3C2BO00750 1634 aa37.5■■■■□ 3.59
RFWD2-207ENST00000474194 PTPRTO14522 1441 aa37.49■■■■□ 3.59
RFWD2-207ENST00000474194 UGGT1Q9NYU2 1555 aa37.48■■■■□ 3.59
RFWD2-207ENST00000474194 UBR1Q8IWV7 1749 aa37.47■■■■□ 3.59
RFWD2-207ENST00000474194 IDI1Q13907 227 aa37.45■■■■□ 3.59
RFWD2-207ENST00000474194 SLC52A1Q9NWF4 448 aa37.45■■■■□ 3.59
RFWD2-207ENST00000474194 TRPM2O94759 1503 aa37.42■■■■□ 3.58
RFWD2-207ENST00000474194 PLA2R1Q13018 1463 aa37.42■■■■□ 3.58
RFWD2-207ENST00000474194 FOXD1Q16676 465 aa37.42■■■■□ 3.58
RFWD2-207ENST00000474194 KDM5AP29375 1690 aaKnown RBP37.4■■■■□ 3.58
RFWD2-207ENST00000474194 ADGRB3O60242 1522 aa37.39■■■■□ 3.58
RFWD2-207ENST00000474194 STRCQ7RTU9 1775 aa37.37■■■■□ 3.57
RFWD2-207ENST00000474194 CLTCL1P53675 1640 aa37.36■■■■□ 3.57
RFWD2-207ENST00000474194 THEMISQ8N1K5 641 aaPredicted RBP37.35■■■■□ 3.57
RFWD2-207ENST00000474194 MYO5BQ9ULV0 1848 aa37.33■■■■□ 3.57
RFWD2-207ENST00000474194 TMEM131LA2VDJ0 1609 aa37.32■■■■□ 3.57
RFWD2-207ENST00000474194 STAG3Q9UJ98 1225 aa37.31■■■■□ 3.56
RFWD2-207ENST00000474194 ARHGAP23Q9P227 1491 aa37.26■■■■□ 3.56
RFWD2-207ENST00000474194 SLIT1O75093 1534 aa37.26■■■■□ 3.55
RFWD2-207ENST00000474194 POLR1AO95602 1720 aaPredicted RBP37.25■■■■□ 3.55
RFWD2-207ENST00000474194 PCGF6Q9BYE7 350 aa37.25■■■■□ 3.55
RFWD2-207ENST00000474194 NCKAP5LQ9HCH0 1330 aa37.23■■■■□ 3.55
RFWD2-207ENST00000474194 KIF1BO60333 1816 aa37.22■■■■□ 3.55
RFWD2-207ENST00000474194 TMEM2Q9UHN6 1383 aa37.22■■■■□ 3.55
RFWD2-207ENST00000474194 CHGAP10645 457 aaKnown RBP37.22■■■■□ 3.55
RFWD2-207ENST00000474194 NEURL4Q96JN8 1562 aa37.2■■■■□ 3.55
RFWD2-207ENST00000474194 CCDC144AA2RUR9 1427 aa37.19■■■■□ 3.54
RFWD2-207ENST00000474194 ANKLE2Q86XL3 938 aa37.17■■■■□ 3.54
RFWD2-207ENST00000474194 ANKRD30BQ9BXX2 1392 aa37.17■■■■□ 3.54
RFWD2-207ENST00000474194 SCAF11Q99590 1463 aaKnown RBP37.14■■■■□ 3.54
RFWD2-207ENST00000474194 LTKP29376 864 aa37.13■■■■□ 3.53
RFWD2-207ENST00000474194 ZFYVE9O95405 1425 aa37.12■■■■□ 3.53
RFWD2-207ENST00000474194 RIMS2Q9UQ26 1411 aa37.1■■■■□ 3.53
RFWD2-207ENST00000474194 MED14O60244 1454 aa37.1■■■■□ 3.53
RFWD2-207ENST00000474194 TXNDC2Q86VQ3 553 aa37.1■■■■□ 3.53
RFWD2-207ENST00000474194 DMRT2Q9Y5R5 561 aa37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms