RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ARID4BQ4LE39 1312 aaPredicted RBP21.55■■□□□ 1.04
LMNA-213ENST00000473598 UNC13BO14795 1591 aa21.55■■□□□ 1.04
LMNA-213ENST00000473598 KDM5DQ9BY66 1539 aa21.55■■□□□ 1.04
LMNA-213ENST00000473598 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
LMNA-213ENST00000473598 PZPP20742 1482 aa21.54■■□□□ 1.04
LMNA-213ENST00000473598 EIF2AK4Q9P2K8 1649 aaKnown RBP21.51■■□□□ 1.03
LMNA-213ENST00000473598 A2MP01023 1474 aa21.5■■□□□ 1.03
LMNA-213ENST00000473598 NUP155O75694 1391 aa21.5■■□□□ 1.03
LMNA-213ENST00000473598 DHX29Q7Z478 1369 aaKnown RBP21.5■■□□□ 1.03
LMNA-213ENST00000473598 REREQ9P2R6 1566 aa21.49■■□□□ 1.03
LMNA-213ENST00000473598 MLECQ14165 292 aa21.49■■□□□ 1.03
LMNA-213ENST00000473598 SLC4A1APQ9BWU0 796 aaKnown RBP21.49■■□□□ 1.03
LMNA-213ENST00000473598 DEPDC5O75140 1603 aa21.47■■□□□ 1.03
LMNA-213ENST00000473598 IQGAP3Q86VI3 1631 aa21.47■■□□□ 1.03
LMNA-213ENST00000473598 KDM4FA0A1W2PPD8 638 aa21.46■■□□□ 1.03
LMNA-213ENST00000473598 FAM135AQ9P2D6 1515 aa21.45■■□□□ 1.02
LMNA-213ENST00000473598 BCORL1Q5H9F3 1711 aa21.44■■□□□ 1.02
LMNA-213ENST00000473598 AGLP35573 1532 aa21.43■■□□□ 1.02
LMNA-213ENST00000473598 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
LMNA-213ENST00000473598 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
LMNA-213ENST00000473598 FOXD1Q16676 465 aa21.4■■□□□ 1.02
LMNA-213ENST00000473598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.4■■□□□ 1.022e-8■■■□□ 16.9
LMNA-213ENST00000473598 KIF3BO15066 747 aa21.39■■□□□ 1.02
LMNA-213ENST00000473598 PKD2Q13563 968 aa21.39■■□□□ 1.02
LMNA-213ENST00000473598 RNF17Q9BXT8 1623 aaKnown RBP21.39■■□□□ 1.01
LMNA-213ENST00000473598 ADAMTSL3P82987 1691 aa21.39■■□□□ 1.01
LMNA-213ENST00000473598 MROH1Q8NDA8 1641 aa21.39■■□□□ 1.01
LMNA-213ENST00000473598 PRDM15P57071 1507 aaPredicted RBP21.38■■□□□ 1.01
LMNA-213ENST00000473598 GGT6Q6P531 493 aa21.38■■□□□ 1.01
LMNA-213ENST00000473598 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
LMNA-213ENST00000473598 MADDQ8WXG6 1647 aa21.38■■□□□ 1.01
LMNA-213ENST00000473598 ANKRD30BQ9BXX2 1392 aa21.38■■□□□ 1.01
LMNA-213ENST00000473598 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
LMNA-213ENST00000473598 VWDEQ8N2E2 1590 aa21.37■■□□□ 1.01
LMNA-213ENST00000473598 KANK1Q14678 1352 aa21.33■■□□□ 1.01
LMNA-213ENST00000473598 TIMELESSQ9UNS1 1208 aa21.33■■□□□ 1
LMNA-213ENST00000473598 FER1L4A9Z1Z3 1794 aa21.32■■□□□ 1
LMNA-213ENST00000473598 TET3O43151 1660 aa21.32■■□□□ 1
LMNA-213ENST00000473598 RIMS1Q86UR5 1692 aaKnown RBP21.32■■□□□ 1
LMNA-213ENST00000473598 E9PCH4 1651 aa21.3■■□□□ 1
LMNA-213ENST00000473598 CEP152O94986 1710 aa21.29■■□□□ 1
LMNA-213ENST00000473598 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
LMNA-213ENST00000473598 RPRD2Q5VT52 1461 aaKnown RBP21.29■■□□□ 1
LMNA-213ENST00000473598 TONSLQ96HA7 1378 aa21.27■■□□□ 1
LMNA-213ENST00000473598 LMTK2Q8IWU2 1503 aa21.27■■□□□ 1
LMNA-213ENST00000473598 PTPRMP28827 1452 aa21.26■□□□□ 0.99
LMNA-213ENST00000473598 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
LMNA-213ENST00000473598 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
LMNA-213ENST00000473598 CEBPAP49715 358 aaPredicted RBP21.24■□□□□ 0.99
LMNA-213ENST00000473598 EFCAB6Q5THR3 1501 aa21.23■□□□□ 0.99
LMNA-213ENST00000473598 WASHC2CQ9Y4E1 1318 aa21.23■□□□□ 0.99
LMNA-213ENST00000473598 ZC3H13Q5T200 1668 aaKnown RBP21.23■□□□□ 0.99
LMNA-213ENST00000473598 SPHKAPQ2M3C7 1700 aa21.22■□□□□ 0.99
LMNA-213ENST00000473598 PLA2R1Q13018 1463 aa21.22■□□□□ 0.99
LMNA-213ENST00000473598 BCL11AQ9H165 835 aa21.21■□□□□ 0.99
LMNA-213ENST00000473598 ABCC3O15438 1527 aa21.21■□□□□ 0.99
LMNA-213ENST00000473598 CAMSAP1Q5T5Y3 1602 aa21.19■□□□□ 0.98
LMNA-213ENST00000473598 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
LMNA-213ENST00000473598 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
LMNA-213ENST00000473598 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
LMNA-213ENST00000473598 C3P01024 1663 aa21.18■□□□□ 0.98
LMNA-213ENST00000473598 PPP1R15AO75807 674 aaPredicted RBP21.17■□□□□ 0.98
LMNA-213ENST00000473598 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
LMNA-213ENST00000473598 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
LMNA-213ENST00000473598 PTPRTO14522 1441 aa21.17■□□□□ 0.98
LMNA-213ENST00000473598 TRPM2O94759 1503 aa21.16■□□□□ 0.98
LMNA-213ENST00000473598 MROH2AA6NES4 1674 aa21.16■□□□□ 0.98
LMNA-213ENST00000473598 L3MBTL2Q969R5 705 aa21.14■□□□□ 0.97
LMNA-213ENST00000473598 CFAP65Q6ZU64 1925 aaKnown RBP21.13■□□□□ 0.97
LMNA-213ENST00000473598 NPATQ14207 1427 aa21.12■□□□□ 0.97
LMNA-213ENST00000473598 FBXO31Q5XUX0 539 aaPredicted RBP21.12■□□□□ 0.97
LMNA-213ENST00000473598 CLTCL1P53675 1640 aa21.1■□□□□ 0.97
LMNA-213ENST00000473598 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
LMNA-213ENST00000473598 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
LMNA-213ENST00000473598 KIF1BO60333 1816 aa21.05■□□□□ 0.96
LMNA-213ENST00000473598 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
LMNA-213ENST00000473598 PREX1Q8TCU6 1659 aa21.04■□□□□ 0.96
LMNA-213ENST00000473598 UGGT1Q9NYU2 1555 aa21.03■□□□□ 0.96
LMNA-213ENST00000473598 NOS1P29475 1434 aa21.02■□□□□ 0.96
LMNA-213ENST00000473598 SPATA31E1Q6ZUB1 1445 aa21.02■□□□□ 0.96
LMNA-213ENST00000473598 NEURL4Q96JN8 1562 aa21.01■□□□□ 0.95
LMNA-213ENST00000473598 ERVK-7P63135 1459 aa21.01■□□□□ 0.95
LMNA-213ENST00000473598 SYNMO15061 1565 aa21■□□□□ 0.95
LMNA-213ENST00000473598 PIK3C2BO00750 1634 aa20.99■□□□□ 0.95
LMNA-213ENST00000473598 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
LMNA-213ENST00000473598 TNRQ92752 1358 aa20.98■□□□□ 0.95
LMNA-213ENST00000473598 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
LMNA-213ENST00000473598 LMTK3Q96Q04 1460 aa20.97■□□□□ 0.95
LMNA-213ENST00000473598 SETD1BQ9UPS6 1966 aaKnown RBP20.97■□□□□ 0.95
LMNA-213ENST00000473598 NBPF8Q3BBV2 869 aa20.97■□□□□ 0.95
LMNA-213ENST00000473598 DCAF11Q8TEB1 546 aa20.97■□□□□ 0.95
LMNA-213ENST00000473598 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
LMNA-213ENST00000473598 MYO3AQ8NEV4 1616 aa20.96■□□□□ 0.95
LMNA-213ENST00000473598 HSPA2P54652 639 aa20.94■□□□□ 0.94
LMNA-213ENST00000473598 ADGRB3O60242 1522 aa20.93■□□□□ 0.94
LMNA-213ENST00000473598 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
LMNA-213ENST00000473598 IFT172Q9UG01 1749 aa20.91■□□□□ 0.94
LMNA-213ENST00000473598 CEP170BQ9Y4F5 1589 aaPredicted RBP20.9■□□□□ 0.94
LMNA-213ENST00000473598 PRKCSHP14314 528 aaPredicted RBP20.9■□□□□ 0.94
LMNA-213ENST00000473598 ZNF326Q5BKZ1 582 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms