RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, human

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAXBP1-208	ENST00000472588	KIF3B	O15066	747 aa		32.91	■■■□□ 2.86
PAXBP1-208	ENST00000472588	DEPDC5	O75140	1603 aa		32.88	■■■□□ 2.85
PAXBP1-208	ENST00000472588	CCER1	Q8TC90	406 aa	Predicted RBP	32.88	■■■□□ 2.85
PAXBP1-208	ENST00000472588	KDM5D	Q9BY66	1539 aa		32.88	■■■□□ 2.85
PAXBP1-208	ENST00000472588	NUP155	O75694	1391 aa		32.87	■■■□□ 2.85
PAXBP1-208	ENST00000472588	DHX57	Q6P158	1386 aa	Known RBP	32.87	■■■□□ 2.85
PAXBP1-208	ENST00000472588	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.86	■■■□□ 2.85
PAXBP1-208	ENST00000472588	AGL	P35573	1532 aa		32.85	■■■□□ 2.85
PAXBP1-208	ENST00000472588	RNF17	Q9BXT8	1623 aa	Known RBP	32.85	■■■□□ 2.85
PAXBP1-208	ENST00000472588	KANK1	Q14678	1352 aa		32.83	■■■□□ 2.85
PAXBP1-208	ENST00000472588	MPHOSPH9	Q99550	1183 aa		32.81	■■■□□ 2.84
PAXBP1-208	ENST00000472588	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.81	■■■□□ 2.84	2e-7	■■□□□ 14.1
PAXBP1-208	ENST00000472588	IQGAP3	Q86VI3	1631 aa		32.81	■■■□□ 2.84
PAXBP1-208	ENST00000472588	PRDM15	P57071	1507 aa	Predicted RBP	32.8	■■■□□ 2.84
PAXBP1-208	ENST00000472588	ADAMTSL3	P82987	1691 aa		32.79	■■■□□ 2.84
PAXBP1-208	ENST00000472588	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.79	■■■□□ 2.84
PAXBP1-208	ENST00000472588	CLSPN	Q9HAW4	1339 aa		32.78	■■■□□ 2.84
PAXBP1-208	ENST00000472588	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.77	■■■□□ 2.84
PAXBP1-208	ENST00000472588	FAM135A	Q9P2D6	1515 aa		32.77	■■■□□ 2.84
PAXBP1-208	ENST00000472588	PZP	P20742	1482 aa		32.77	■■■□□ 2.84
PAXBP1-208	ENST00000472588	MROH1	Q8NDA8	1641 aa		32.75	■■■□□ 2.83
PAXBP1-208	ENST00000472588	GGT6	Q6P531	493 aa		32.75	■■■□□ 2.83
PAXBP1-208	ENST00000472588	VWDE	Q8N2E2	1590 aa		32.73	■■■□□ 2.83
PAXBP1-208	ENST00000472588	MADD	Q8WXG6	1647 aa		32.71	■■■□□ 2.83
PAXBP1-208	ENST00000472588	PPP6R1	Q9UPN7	881 aa		32.71	■■■□□ 2.83
PAXBP1-208	ENST00000472588	MLEC	Q14165	292 aa		32.67	■■■□□ 2.82
PAXBP1-208	ENST00000472588	ZC3H13	Q5T200	1668 aa	Known RBP	32.66	■■■□□ 2.82
PAXBP1-208	ENST00000472588	LMTK2	Q8IWU2	1503 aa		32.65	■■■□□ 2.82
PAXBP1-208	ENST00000472588	TET3	O43151	1660 aa		32.65	■■■□□ 2.82
PAXBP1-208	ENST00000472588	PKD2	Q13563	968 aa		32.65	■■■□□ 2.82
PAXBP1-208	ENST00000472588	WASHC2C	Q9Y4E1	1318 aa		32.65	■■■□□ 2.82
PAXBP1-208	ENST00000472588	FER1L4	A9Z1Z3	1794 aa		32.64	■■■□□ 2.82
PAXBP1-208	ENST00000472588	RIMS1	Q86UR5	1692 aa	Known RBP	32.64	■■■□□ 2.82
PAXBP1-208	ENST00000472588	CEP152	O94986	1710 aa		32.6	■■■□□ 2.81
PAXBP1-208	ENST00000472588	ABCC3	O15438	1527 aa		32.59	■■■□□ 2.81
PAXBP1-208	ENST00000472588	PTPRM	P28827	1452 aa		32.56	■■■□□ 2.8
PAXBP1-208	ENST00000472588	EFCAB6	Q5THR3	1501 aa		32.56	■■■□□ 2.8
PAXBP1-208	ENST00000472588	ESF1	Q9H501	851 aa	Known RBP	32.55	■■■□□ 2.8
PAXBP1-208	ENST00000472588		E9PCH4	1651 aa		32.53	■■■□□ 2.8
PAXBP1-208	ENST00000472588	CAMSAP1	Q5T5Y3	1602 aa		32.53	■■■□□ 2.8
PAXBP1-208	ENST00000472588	RPRD2	Q5VT52	1461 aa	Known RBP	32.52	■■■□□ 2.8
PAXBP1-208	ENST00000472588	FOXD1	Q16676	465 aa		32.51	■■■□□ 2.8
PAXBP1-208	ENST00000472588	ANKRD30B	Q9BXX2	1392 aa		32.51	■■■□□ 2.79
PAXBP1-208	ENST00000472588	ZEB1	P37275	1124 aa	Predicted RBP	32.51	■■■□□ 2.79
PAXBP1-208	ENST00000472588	ARHGAP31	Q2M1Z3	1444 aa		32.49	■■■□□ 2.79
PAXBP1-208	ENST00000472588	CLTC	Q00610	1675 aa	Known RBP	32.47	■■■□□ 2.79
PAXBP1-208	ENST00000472588	CNTLN	Q9NXG0	1405 aa		32.47	■■■□□ 2.79
PAXBP1-208	ENST00000472588	SPHKAP	Q2M3C7	1700 aa		32.42	■■■□□ 2.78
PAXBP1-208	ENST00000472588	NPAT	Q14207	1427 aa		32.41	■■■□□ 2.78
PAXBP1-208	ENST00000472588	MROH2A	A6NES4	1674 aa		32.4	■■■□□ 2.78
PAXBP1-208	ENST00000472588	PTPRT	O14522	1441 aa		32.39	■■■□□ 2.78
PAXBP1-208	ENST00000472588	SIN3A	Q96ST3	1273 aa		32.38	■■■□□ 2.77
PAXBP1-208	ENST00000472588	PLPPR3	Q6T4P5	718 aa		32.37	■■■□□ 2.77
PAXBP1-208	ENST00000472588	TRPM2	O94759	1503 aa		32.37	■■■□□ 2.77
PAXBP1-208	ENST00000472588	CCDC144A	A2RUR9	1427 aa		32.37	■■■□□ 2.77
PAXBP1-208	ENST00000472588	C3	P01024	1663 aa		32.36	■■■□□ 2.77
PAXBP1-208	ENST00000472588	NEUROD1	Q13562	356 aa		32.36	■■■□□ 2.77
PAXBP1-208	ENST00000472588	TIMELESS	Q9UNS1	1208 aa		32.34	■■■□□ 2.77
PAXBP1-208	ENST00000472588	PLA2R1	Q13018	1463 aa		32.34	■■■□□ 2.77
PAXBP1-208	ENST00000472588	ZMYM3	Q14202	1370 aa		32.34	■■■□□ 2.77
PAXBP1-208	ENST00000472588	CFAP65	Q6ZU64	1925 aa	Known RBP	32.33	■■■□□ 2.77
PAXBP1-208	ENST00000472588	PREX1	Q8TCU6	1659 aa		32.3	■■■□□ 2.76
PAXBP1-208	ENST00000472588	CEBPA	P49715	358 aa	Predicted RBP	32.3	■■■□□ 2.76
PAXBP1-208	ENST00000472588	NOS1	P29475	1434 aa		32.29	■■■□□ 2.76
PAXBP1-208	ENST00000472588	TONSL	Q96HA7	1378 aa		32.26	■■■□□ 2.75
PAXBP1-208	ENST00000472588	ERVK-7	P63135	1459 aa		32.24	■■■□□ 2.75
PAXBP1-208	ENST00000472588	SPATA31D1	Q6ZQQ2	1576 aa		32.22	■■■□□ 2.75
PAXBP1-208	ENST00000472588	CLTCL1	P53675	1640 aa		32.22	■■■□□ 2.75
PAXBP1-208	ENST00000472588	SLC52A1	Q9NWF4	448 aa		32.21	■■■□□ 2.75
PAXBP1-208	ENST00000472588	SYNM	O15061	1565 aa		32.2	■■■□□ 2.74
PAXBP1-208	ENST00000472588	KIF1B	O60333	1816 aa		32.19	■■■□□ 2.74
PAXBP1-208	ENST00000472588	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.18	■■■□□ 2.74
PAXBP1-208	ENST00000472588	PIK3C2B	O00750	1634 aa		32.17	■■■□□ 2.74
PAXBP1-208	ENST00000472588	SETD1B	Q9UPS6	1966 aa	Known RBP	32.17	■■■□□ 2.74
PAXBP1-208	ENST00000472588	NEURL4	Q96JN8	1562 aa		32.15	■■■□□ 2.74
PAXBP1-208	ENST00000472588	LMTK3	Q96Q04	1460 aa		32.14	■■■□□ 2.73
PAXBP1-208	ENST00000472588	UGGT1	Q9NYU2	1555 aa		32.13	■■■□□ 2.73
PAXBP1-208	ENST00000472588	TNR	Q92752	1358 aa		32.1	■■■□□ 2.73
PAXBP1-208	ENST00000472588	SPATA31E1	Q6ZUB1	1445 aa		32.09	■■■□□ 2.73
PAXBP1-208	ENST00000472588	IDI1	Q13907	227 aa		32.08	■■■□□ 2.73
PAXBP1-208	ENST00000472588	L3MBTL2	Q969R5	705 aa		32.08	■■■□□ 2.73
PAXBP1-208	ENST00000472588	UHRF1BP1	Q6BDS2	1440 aa		32.06	■■■□□ 2.72
PAXBP1-208	ENST00000472588	RGL3	Q3MIN7	710 aa		32.04	■■■□□ 2.72
PAXBP1-208	ENST00000472588	ADGRB3	O60242	1522 aa		32.03	■■■□□ 2.72
PAXBP1-208	ENST00000472588	CHGA	P10645	457 aa	Known RBP	32.02	■■■□□ 2.72
PAXBP1-208	ENST00000472588	STAC3	Q96MF2	364 aa		32.02	■■■□□ 2.72
PAXBP1-208	ENST00000472588	NLRP1	Q9C000	1473 aa		32.02	■■■□□ 2.72
PAXBP1-208	ENST00000472588	MYO3A	Q8NEV4	1616 aa		32.02	■■■□□ 2.72
PAXBP1-208	ENST00000472588	PPP1R15A	O75807	674 aa	Predicted RBP	32.01	■■■□□ 2.72
PAXBP1-208	ENST00000472588	STAG3	Q9UJ98	1225 aa		32	■■■□□ 2.71
PAXBP1-208	ENST00000472588	KDM5A	P29375	1690 aa	Known RBP	31.98	■■■□□ 2.71
PAXBP1-208	ENST00000472588	TMEM131L	A2VDJ0	1609 aa		31.98	■■■□□ 2.71
PAXBP1-208	ENST00000472588	DCAF11	Q8TEB1	546 aa		31.97	■■■□□ 2.71
PAXBP1-208	ENST00000472588	RPGRIP1L	Q68CZ1	1315 aa		31.97	■■■□□ 2.71
PAXBP1-208	ENST00000472588	ZNF326	Q5BKZ1	582 aa	Known RBP	31.96	■■■□□ 2.71
PAXBP1-208	ENST00000472588	ZNF142	P52746	1687 aa	Predicted RBP	31.96	■■■□□ 2.71
PAXBP1-208	ENST00000472588	HSPA2	P54652	639 aa		31.95	■■■□□ 2.71
PAXBP1-208	ENST00000472588	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.91	■■■□□ 2.7
PAXBP1-208	ENST00000472588	MYO5B	Q9ULV0	1848 aa		31.9	■■■□□ 2.7
PAXBP1-208	ENST00000472588	IFT172	Q9UG01	1749 aa		31.89	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms