RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 DEPDC5O75140 1603 aa25.91■■□□□ 1.74
GCFC2-208ENST00000472230 DHX29Q7Z478 1369 aaKnown RBP25.91■■□□□ 1.74
GCFC2-208ENST00000472230 KDM5CP41229 1560 aa25.9■■□□□ 1.74
GCFC2-208ENST00000472230 CCDC144AA2RUR9 1427 aa25.9■■□□□ 1.74
GCFC2-208ENST00000472230 NBPF8Q3BBV2 869 aa25.89■■□□□ 1.74
GCFC2-208ENST00000472230 KANK1Q14678 1352 aa25.89■■□□□ 1.73
GCFC2-208ENST00000472230 EIF4G2P78344 907 aaKnown RBP eCLIP25.88■■□□□ 1.73
GCFC2-208ENST00000472230 HECW2Q9P2P5 1572 aa25.87■■□□□ 1.73
GCFC2-208ENST00000472230 KIF3BO15066 747 aa25.86■■□□□ 1.73
GCFC2-208ENST00000472230 MLH3Q9UHC1 1453 aa25.85■■□□□ 1.73
GCFC2-208ENST00000472230 HSPA5P11021 654 aaKnown RBP25.84■■□□□ 1.73
GCFC2-208ENST00000472230 DDX10Q13206 875 aaKnown RBP25.83■■□□□ 1.73
GCFC2-208ENST00000472230 DIP2BQ9P265 1576 aa25.83■■□□□ 1.73
GCFC2-208ENST00000472230 A2MP01023 1474 aa25.83■■□□□ 1.72
GCFC2-208ENST00000472230 ZNF326Q5BKZ1 582 aaKnown RBP25.82■■□□□ 1.72
GCFC2-208ENST00000472230 E9PCH4 1651 aa25.82■■□□□ 1.72
GCFC2-208ENST00000472230 TET3O43151 1660 aa25.82■■□□□ 1.72
GCFC2-208ENST00000472230 PLA2R1Q13018 1463 aa25.82■■□□□ 1.72
GCFC2-208ENST00000472230 FAM69CQ0P6D2 419 aa25.81■■□□□ 1.72
GCFC2-208ENST00000472230 ATP10AO60312 1499 aa25.81■■□□□ 1.72
GCFC2-208ENST00000472230 PRDM15P57071 1507 aaPredicted RBP25.8■■□□□ 1.72
GCFC2-208ENST00000472230 VWDEQ8N2E2 1590 aa25.79■■□□□ 1.72
GCFC2-208ENST00000472230 UHRF1BP1Q6BDS2 1440 aa25.78■■□□□ 1.72
GCFC2-208ENST00000472230 DCAF11Q8TEB1 546 aa25.76■■□□□ 1.71
GCFC2-208ENST00000472230 RICTORQ6R327 1708 aa25.76■■□□□ 1.71
GCFC2-208ENST00000472230 MROH1Q8NDA8 1641 aa25.76■■□□□ 1.71
GCFC2-208ENST00000472230 RAPGEF3O95398 923 aa25.76■■□□□ 1.71
GCFC2-208ENST00000472230 KDM2AQ9Y2K7 1162 aa25.76■■□□□ 1.71
GCFC2-208ENST00000472230 ABCA6Q8N139 1617 aa25.76■■□□□ 1.71
GCFC2-208ENST00000472230 SPHKAPQ2M3C7 1700 aa25.74■■□□□ 1.71
GCFC2-208ENST00000472230 RNF17Q9BXT8 1623 aaKnown RBP25.73■■□□□ 1.71
GCFC2-208ENST00000472230 TSPOAP1O95153 1857 aa25.73■■□□□ 1.71
GCFC2-208ENST00000472230 RALGAPBQ86X10 1494 aa25.71■■□□□ 1.71
GCFC2-208ENST00000472230 TRPM2O94759 1503 aa25.71■■□□□ 1.71
GCFC2-208ENST00000472230 RGL3Q3MIN7 710 aa25.71■■□□□ 1.71
GCFC2-208ENST00000472230 FRMPD1Q5SYB0 1578 aa25.71■■□□□ 1.71
GCFC2-208ENST00000472230 BCORL1Q5H9F3 1711 aa25.68■■□□□ 1.7
GCFC2-208ENST00000472230 DIP2CQ9Y2E4 1556 aa25.68■■□□□ 1.7
GCFC2-208ENST00000472230 CEP152O94986 1710 aa25.67■■□□□ 1.7
GCFC2-208ENST00000472230 PTPRTO14522 1441 aa25.67■■□□□ 1.7
GCFC2-208ENST00000472230 CENPBP07199 599 aaPredicted RBP25.66■■□□□ 1.7
GCFC2-208ENST00000472230 SPATA31E1Q6ZUB1 1445 aa25.65■■□□□ 1.7
GCFC2-208ENST00000472230 EFCAB6Q5THR3 1501 aa25.65■■□□□ 1.7
GCFC2-208ENST00000472230 PPRC1Q5VV67 1664 aaKnown RBP25.65■■□□□ 1.7
GCFC2-208ENST00000472230 LMTK2Q8IWU2 1503 aa25.65■■□□□ 1.7
GCFC2-208ENST00000472230 YTHDC1Q96MU7 727 aaKnown RBP25.64■■□□□ 1.7
GCFC2-208ENST00000472230 USP47Q96K76 1375 aa25.64■■□□□ 1.69
GCFC2-208ENST00000472230 WASHC2AQ641Q2 1341 aa25.63■■□□□ 1.69
GCFC2-208ENST00000472230 POLR1AO95602 1720 aaPredicted RBP25.63■■□□□ 1.69
GCFC2-208ENST00000472230 GGT6Q6P531 493 aa25.62■■□□□ 1.69
GCFC2-208ENST00000472230 CLTCL1P53675 1640 aa25.62■■□□□ 1.69
GCFC2-208ENST00000472230 PRAG1Q86YV5 1406 aa25.62■■□□□ 1.69
GCFC2-208ENST00000472230 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
GCFC2-208ENST00000472230 TRPM1Q7Z4N2 1603 aa25.61■■□□□ 1.69
GCFC2-208ENST00000472230 KIF13AQ9H1H9 1805 aa25.6■■□□□ 1.69
GCFC2-208ENST00000472230 ZMYM4Q5VZL5 1548 aa25.59■■□□□ 1.69
GCFC2-208ENST00000472230 ANP32CO43423 234 aa25.59■■□□□ 1.69
GCFC2-208ENST00000472230 ROCK2O75116 1388 aaKnown RBP25.58■■□□□ 1.69
GCFC2-208ENST00000472230 CCDC7Q96M83 1385 aa25.58■■□□□ 1.69
GCFC2-208ENST00000472230 YEATS2Q9ULM3 1422 aa25.57■■□□□ 1.68
GCFC2-208ENST00000472230 WASHC2CQ9Y4E1 1318 aa25.55■■□□□ 1.68
GCFC2-208ENST00000472230 KIF1BO60333 1816 aa25.53■■□□□ 1.68
GCFC2-208ENST00000472230 C11orf95C9JLR9 678 aaPredicted RBP25.53■■□□□ 1.68
GCFC2-208ENST00000472230 ABCC3O15438 1527 aa25.53■■□□□ 1.68
GCFC2-208ENST00000472230 CAMSAP1Q5T5Y3 1602 aa25.51■■□□□ 1.67
GCFC2-208ENST00000472230 NEURL4Q96JN8 1562 aa25.5■■□□□ 1.67
GCFC2-208ENST00000472230 STAC3Q96MF2 364 aa25.5■■□□□ 1.67
GCFC2-208ENST00000472230 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
GCFC2-208ENST00000472230 ZC3H13Q5T200 1668 aaKnown RBP25.49■■□□□ 1.67
GCFC2-208ENST00000472230 KIF7Q2M1P5 1343 aa25.49■■□□□ 1.67
GCFC2-208ENST00000472230 LAMC1P11047 1609 aa25.49■■□□□ 1.67
GCFC2-208ENST00000472230 UGGT1Q9NYU2 1555 aa25.47■■□□□ 1.67
GCFC2-208ENST00000472230 NPATQ14207 1427 aa25.47■■□□□ 1.67
GCFC2-208ENST00000472230 CFAP65Q6ZU64 1925 aaKnown RBP25.46■■□□□ 1.67
GCFC2-208ENST00000472230 MADDQ8WXG6 1647 aa25.46■■□□□ 1.67
GCFC2-208ENST00000472230 GPRASP1Q5JY77 1395 aa25.45■■□□□ 1.67
GCFC2-208ENST00000472230 NBPF1Q3BBV0 1214 aa25.44■■□□□ 1.66
GCFC2-208ENST00000472230 ARID4BQ4LE39 1312 aaPredicted RBP25.44■■□□□ 1.66
GCFC2-208ENST00000472230 ST20-MTHFSA0A0A6YYL1 179 aa25.43■■□□□ 1.66
GCFC2-208ENST00000472230 CCER2I3L3R5 266 aa25.42■■□□□ 1.66
GCFC2-208ENST00000472230 REREQ9P2R6 1566 aa25.41■■□□□ 1.66
GCFC2-208ENST00000472230 POLR3GLQ9BT43 218 aa25.41■■□□□ 1.66
GCFC2-208ENST00000472230 MROH2AA6NES4 1674 aa25.4■■□□□ 1.66
GCFC2-208ENST00000472230 CHGAP10645 457 aaKnown RBP25.37■■□□□ 1.65
GCFC2-208ENST00000472230 ARHGAP31Q2M1Z3 1444 aa25.37■■□□□ 1.65
GCFC2-208ENST00000472230 IFT172Q9UG01 1749 aa25.37■■□□□ 1.65
GCFC2-208ENST00000472230 ADGRB3O60242 1522 aa25.36■■□□□ 1.65
GCFC2-208ENST00000472230 MYOM2P54296 1465 aa25.36■■□□□ 1.65
GCFC2-208ENST00000472230 SIGLEC1Q9BZZ2 1709 aa25.36■■□□□ 1.65
GCFC2-208ENST00000472230 AGLP35573 1532 aa25.35■■□□□ 1.65
GCFC2-208ENST00000472230 NOS1P29475 1434 aa25.34■■□□□ 1.65
GCFC2-208ENST00000472230 KIAA1210Q9ULL0 1709 aa25.34■■□□□ 1.65
GCFC2-208ENST00000472230 ARHGEF40Q8TER5 1519 aa25.33■■□□□ 1.65
GCFC2-208ENST00000472230 COL17A1Q9UMD9 1497 aaPredicted RBP25.32■■□□□ 1.64
GCFC2-208ENST00000472230 SYNMO15061 1565 aa25.3■■□□□ 1.64
GCFC2-208ENST00000472230 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
GCFC2-208ENST00000472230 PIK3C2BO00750 1634 aa25.29■■□□□ 1.64
GCFC2-208ENST00000472230 PPP6R1Q9UPN7 881 aa25.28■■□□□ 1.64
GCFC2-208ENST00000472230 PREX1Q8TCU6 1659 aa25.28■■□□□ 1.64
GCFC2-208ENST00000472230 PPLO60437 1756 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms