RNA–Protein interactions for RNA: ENST00000472083.1

CUL4A-207, Transcript of cullin 4A, humanhuman

TSL 5

Gene CUL4A, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-207ENST00000472083 KIF3CO14782 793 aa10.44□□□□□ -0.74
CUL4A-207ENST00000472083 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
CUL4A-207ENST00000472083 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
CUL4A-207ENST00000472083 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
CUL4A-207ENST00000472083 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
CUL4A-207ENST00000472083 SHROOM2Q13796 1616 aa10.41□□□□□ -0.74
CUL4A-207ENST00000472083 C2orf72A6NCS6 295 aa10.41□□□□□ -0.74
CUL4A-207ENST00000472083 SLC34A2O95436 690 aa10.41□□□□□ -0.74
CUL4A-207ENST00000472083 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
CUL4A-207ENST00000472083 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
CUL4A-207ENST00000472083 RYDENQ9NUL5 291 aaKnown RBP10.39□□□□□ -0.75
CUL4A-207ENST00000472083 KIAA0586Q9BVV6 1533 aa10.38□□□□□ -0.75
CUL4A-207ENST00000472083 RIMBP3CA6NJZ7 1639 aa10.37□□□□□ -0.75
CUL4A-207ENST00000472083 RIMBP3BA6NNM3 1639 aa10.37□□□□□ -0.75
CUL4A-207ENST00000472083 RIMBP3Q9UFD9 1639 aa10.37□□□□□ -0.75
CUL4A-207ENST00000472083 ZNF316A6NFI3 1004 aaPredicted RBP10.37□□□□□ -0.75
CUL4A-207ENST00000472083 KIF21BO75037 1637 aa10.36□□□□□ -0.75
CUL4A-207ENST00000472083 ERCC6L2Q5T890 1561 aa10.36□□□□□ -0.75
CUL4A-207ENST00000472083 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
CUL4A-207ENST00000472083 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
CUL4A-207ENST00000472083 ARHGEF11O15085 1522 aa10.36□□□□□ -0.75
CUL4A-207ENST00000472083 PTGER2P43116 358 aa10.35□□□□□ -0.75
CUL4A-207ENST00000472083 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
CUL4A-207ENST00000472083 PPP1R37O75864 691 aa10.32□□□□□ -0.76
CUL4A-207ENST00000472083 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
CUL4A-207ENST00000472083 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
CUL4A-207ENST00000472083 ARAP1Q96P48 1450 aa10.31□□□□□ -0.76
CUL4A-207ENST00000472083 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
CUL4A-207ENST00000472083 PBX2P40425 430 aa10.31□□□□□ -0.76
CUL4A-207ENST00000472083 UGGT2Q9NYU1 1516 aa10.31□□□□□ -0.76
CUL4A-207ENST00000472083 PCDHGA4Q9Y5G9 962 aa10.3□□□□□ -0.76
CUL4A-207ENST00000472083 PRG4Q92954 1404 aaPredicted RBP10.3□□□□□ -0.76
CUL4A-207ENST00000472083 DISP1Q96F81 1524 aa10.29□□□□□ -0.76
CUL4A-207ENST00000472083 NUDT7P0C024 238 aa10.28□□□□□ -0.76
CUL4A-207ENST00000472083 FOXK1P85037 733 aa10.28□□□□□ -0.76
CUL4A-207ENST00000472083 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.764e-8■■□□□ 14
CUL4A-207ENST00000472083 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
CUL4A-207ENST00000472083 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
CUL4A-207ENST00000472083 TBC1D12O60347 775 aa10.26□□□□□ -0.77
CUL4A-207ENST00000472083 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
CUL4A-207ENST00000472083 MYT1LQ9UL68 1186 aa10.26□□□□□ -0.77
CUL4A-207ENST00000472083 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
CUL4A-207ENST00000472083 CYB5RLQ6IPT4 315 aa10.24□□□□□ -0.77
CUL4A-207ENST00000472083 SAMD9Q5K651 1589 aa10.23□□□□□ -0.77
CUL4A-207ENST00000472083 KIAA0556O60303 1618 aa10.23□□□□□ -0.77
CUL4A-207ENST00000472083 LSM11P83369 360 aaKnown RBP eCLIP10.23□□□□□ -0.77
CUL4A-207ENST00000472083 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
CUL4A-207ENST00000472083 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
CUL4A-207ENST00000472083 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
CUL4A-207ENST00000472083 TNIKQ9UKE5 1360 aa10.21□□□□□ -0.78
CUL4A-207ENST00000472083 CARMIL2Q6F5E8 1435 aa10.2□□□□□ -0.78
CUL4A-207ENST00000472083 LOC105371045A0A1W2PR82 267 aa10.19□□□□□ -0.78
CUL4A-207ENST00000472083 UBTFP17480 764 aaKnown RBP10.19□□□□□ -0.78
CUL4A-207ENST00000472083 PTPRGP23470 1445 aa10.18□□□□□ -0.78
CUL4A-207ENST00000472083 DSG2Q14126 1118 aa10.17□□□□□ -0.78
CUL4A-207ENST00000472083 NKX1-1Q15270 411 aaPredicted RBP10.17□□□□□ -0.78
CUL4A-207ENST00000472083 ADCY10Q96PN6 1610 aa10.17□□□□□ -0.78
CUL4A-207ENST00000472083 ARHGAP35Q9NRY4 1499 aa10.17□□□□□ -0.78
CUL4A-207ENST00000472083 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
CUL4A-207ENST00000472083 ARHGAP33O14559 1287 aa10.16□□□□□ -0.78
CUL4A-207ENST00000472083 UHRF1BP1LA0JNW5 1464 aa10.16□□□□□ -0.78
CUL4A-207ENST00000472083 ABCA8O94911 1581 aa10.15□□□□□ -0.78
CUL4A-207ENST00000472083 EFCAB5A4FU69 1503 aa10.15□□□□□ -0.78
CUL4A-207ENST00000472083 PDE4AP27815 886 aa10.14□□□□□ -0.79
CUL4A-207ENST00000472083 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
CUL4A-207ENST00000472083 UACAQ9BZF9 1416 aa10.14□□□□□ -0.79
CUL4A-207ENST00000472083 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
CUL4A-207ENST00000472083 CRISPLD2Q9H0B8 497 aa10.13□□□□□ -0.79
CUL4A-207ENST00000472083 PLB1Q6P1J6 1458 aa10.12□□□□□ -0.79
CUL4A-207ENST00000472083 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
CUL4A-207ENST00000472083 FHOD3Q2V2M9 1422 aa10.12□□□□□ -0.79
CUL4A-207ENST00000472083 ABCC2Q92887 1545 aa10.12□□□□□ -0.79
CUL4A-207ENST00000472083 TK2O00142 265 aa10.11□□□□□ -0.79
CUL4A-207ENST00000472083 KDM5BQ9UGL1 1544 aa10.11□□□□□ -0.79
CUL4A-207ENST00000472083 OXER1Q8TDS5 423 aa10.1□□□□□ -0.79
CUL4A-207ENST00000472083 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
CUL4A-207ENST00000472083 AXIN2Q9Y2T1 843 aa10.09□□□□□ -0.79
CUL4A-207ENST00000472083 PPP1R15BQ5SWA1 713 aa10.08□□□□□ -0.8
CUL4A-207ENST00000472083 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
CUL4A-207ENST00000472083 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
CUL4A-207ENST00000472083 CLIP1P30622 1438 aa10.07□□□□□ -0.8
CUL4A-207ENST00000472083 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
CUL4A-207ENST00000472083 RAPGEF6Q8TEU7 1601 aa10.07□□□□□ -0.8
CUL4A-207ENST00000472083 ATP10BO94823 1461 aa10.07□□□□□ -0.8
CUL4A-207ENST00000472083 GTPBP6O43824 516 aaPredicted RBP10.07□□□□□ -0.8
CUL4A-207ENST00000472083 LRRIQ1Q96JM4 1722 aa10.07□□□□□ -0.8
CUL4A-207ENST00000472083 ZCCHC11Q5TAX3 1644 aaKnown RBP10.07□□□□□ -0.8
CUL4A-207ENST00000472083 CEP162Q5TB80 1403 aa10.07□□□□□ -0.8
CUL4A-207ENST00000472083 TTBK1Q5TCY1 1321 aaPredicted RBP10.07□□□□□ -0.8
CUL4A-207ENST00000472083 NUP153P49790 1475 aaKnown RBP10.06□□□□□ -0.8
CUL4A-207ENST00000472083 KIF13AQ9H1H9 1805 aa10.05□□□□□ -0.8
CUL4A-207ENST00000472083 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
CUL4A-207ENST00000472083 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
CUL4A-207ENST00000472083 UPF1Q92900 1129 aaKnown RBP eCLIP10.02□□□□□ -0.81
CUL4A-207ENST00000472083 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.81
CUL4A-207ENST00000472083 STAC3Q96MF2 364 aa10.02□□□□□ -0.81
CUL4A-207ENST00000472083 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
CUL4A-207ENST00000472083 ASXL2Q76L83 1435 aa10.01□□□□□ -0.81
CUL4A-207ENST00000472083 CASKIN1Q8WXD9 1431 aa10.01□□□□□ -0.81
CUL4A-207ENST00000472083 ABCC10Q5T3U5 1492 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms