RNA–Protein interactions for RNA: ENST00000472083.1

CUL4A-207, Transcript of cullin 4A, humanhuman

TSL 5

Gene CUL4A, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-207ENST00000472083 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
CUL4A-207ENST00000472083 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
CUL4A-207ENST00000472083 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
CUL4A-207ENST00000472083 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
CUL4A-207ENST00000472083 FOXD1Q16676 465 aa18.88■□□□□ 0.61
CUL4A-207ENST00000472083 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
CUL4A-207ENST00000472083 MSH5O43196 834 aa17.81■□□□□ 0.44
CUL4A-207ENST00000472083 PIAS4Q8N2W9 510 aaPredicted RBP17.7■□□□□ 0.42
CUL4A-207ENST00000472083 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
CUL4A-207ENST00000472083 ADRA2BP18089 450 aa17.6■□□□□ 0.41
CUL4A-207ENST00000472083 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
CUL4A-207ENST00000472083 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
CUL4A-207ENST00000472083 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
CUL4A-207ENST00000472083 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
CUL4A-207ENST00000472083 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
CUL4A-207ENST00000472083 CNKSR2Q8WXI2 1034 aa15.66■□□□□ 0.1
CUL4A-207ENST00000472083 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
CUL4A-207ENST00000472083 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
CUL4A-207ENST00000472083 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
CUL4A-207ENST00000472083 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
CUL4A-207ENST00000472083 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
CUL4A-207ENST00000472083 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
CUL4A-207ENST00000472083 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
CUL4A-207ENST00000472083 NISCHQ9Y2I1 1504 aa15.09■□□□□ 0.01
CUL4A-207ENST00000472083 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
CUL4A-207ENST00000472083 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
CUL4A-207ENST00000472083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■□□□ 13.4
CUL4A-207ENST00000472083 KCNA4P22459 653 aa14.77□□□□□ -0.05
CUL4A-207ENST00000472083 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
CUL4A-207ENST00000472083 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
CUL4A-207ENST00000472083 APLP2Q06481 763 aa14.32□□□□□ -0.12
CUL4A-207ENST00000472083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
CUL4A-207ENST00000472083 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
CUL4A-207ENST00000472083 CAPN15O75808 1086 aa14.26□□□□□ -0.13
CUL4A-207ENST00000472083 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
CUL4A-207ENST00000472083 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
CUL4A-207ENST00000472083 DSG3P32926 999 aa14.15□□□□□ -0.14
CUL4A-207ENST00000472083 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
CUL4A-207ENST00000472083 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
CUL4A-207ENST00000472083 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
CUL4A-207ENST00000472083 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
CUL4A-207ENST00000472083 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
CUL4A-207ENST00000472083 ABCB7O75027 752 aa13.85□□□□□ -0.19
CUL4A-207ENST00000472083 POLA2Q14181 598 aa13.68□□□□□ -0.22
CUL4A-207ENST00000472083 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
CUL4A-207ENST00000472083 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
CUL4A-207ENST00000472083 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
CUL4A-207ENST00000472083 ZBTB22O15209 634 aa13.52□□□□□ -0.25
CUL4A-207ENST00000472083 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
CUL4A-207ENST00000472083 POTEHQ6S545 545 aa13.49□□□□□ -0.25
CUL4A-207ENST00000472083 CCDC180Q9P1Z9 1646 aa13.35□□□□□ -0.27
CUL4A-207ENST00000472083 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
CUL4A-207ENST00000472083 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
CUL4A-207ENST00000472083 FBLN2P98095 1184 aa13.2□□□□□ -0.3
CUL4A-207ENST00000472083 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
CUL4A-207ENST00000472083 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
CUL4A-207ENST00000472083 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
CUL4A-207ENST00000472083 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
CUL4A-207ENST00000472083 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
CUL4A-207ENST00000472083 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
CUL4A-207ENST00000472083 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
CUL4A-207ENST00000472083 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
CUL4A-207ENST00000472083 ABCC9O60706 1549 aa12.9□□□□□ -0.34
CUL4A-207ENST00000472083 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
CUL4A-207ENST00000472083 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
CUL4A-207ENST00000472083 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
CUL4A-207ENST00000472083 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
CUL4A-207ENST00000472083 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
CUL4A-207ENST00000472083 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
CUL4A-207ENST00000472083 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
CUL4A-207ENST00000472083 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
CUL4A-207ENST00000472083 HAX1O00165 279 aa12.67□□□□□ -0.38
CUL4A-207ENST00000472083 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
CUL4A-207ENST00000472083 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
CUL4A-207ENST00000472083 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
CUL4A-207ENST00000472083 ZCCHC6Q5VYS8 1495 aaKnown RBP12.59□□□□□ -0.39
CUL4A-207ENST00000472083 MYO15BQ96JP2 1530 aa12.53□□□□□ -0.4
CUL4A-207ENST00000472083 NACADO15069 1562 aa12.52□□□□□ -0.4
CUL4A-207ENST00000472083 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.41
CUL4A-207ENST00000472083 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
CUL4A-207ENST00000472083 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
CUL4A-207ENST00000472083 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
CUL4A-207ENST00000472083 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
CUL4A-207ENST00000472083 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
CUL4A-207ENST00000472083 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
CUL4A-207ENST00000472083 EVX2Q03828 476 aa12.37□□□□□ -0.43
CUL4A-207ENST00000472083 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-207ENST00000472083 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
CUL4A-207ENST00000472083 CLCN6P51797 869 aa12.27□□□□□ -0.45
CUL4A-207ENST00000472083 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
CUL4A-207ENST00000472083 GABBR2O75899 941 aa12.21□□□□□ -0.45
CUL4A-207ENST00000472083 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
CUL4A-207ENST00000472083 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
CUL4A-207ENST00000472083 PROM2Q8N271 834 aa12.15□□□□□ -0.46
CUL4A-207ENST00000472083 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
CUL4A-207ENST00000472083 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
CUL4A-207ENST00000472083 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
CUL4A-207ENST00000472083 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
CUL4A-207ENST00000472083 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
CUL4A-207ENST00000472083 PLEKHG5O94827 1062 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms