RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 MADDQ8WXG6 1647 aa19.28■□□□□ 0.68
LINC00888-202ENST00000471496 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
LINC00888-202ENST00000471496 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
LINC00888-202ENST00000471496 AGLP35573 1532 aa19.27■□□□□ 0.68
LINC00888-202ENST00000471496 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
LINC00888-202ENST00000471496 ADGBQ8N7X0 1667 aa19.27■□□□□ 0.67
LINC00888-202ENST00000471496 PLXNC1O60486 1568 aa19.26■□□□□ 0.67
LINC00888-202ENST00000471496 RSPH4AQ5TD94 716 aa19.26■□□□□ 0.67
LINC00888-202ENST00000471496 MAST1Q9Y2H9 1570 aa19.25■□□□□ 0.67
LINC00888-202ENST00000471496 CROCC2H7BZ55 1655 aa19.24■□□□□ 0.67
LINC00888-202ENST00000471496 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
LINC00888-202ENST00000471496 RIMS1Q86UR5 1692 aaKnown RBP19.23■□□□□ 0.67
LINC00888-202ENST00000471496 A2MP01023 1474 aa19.23■□□□□ 0.67
LINC00888-202ENST00000471496 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
LINC00888-202ENST00000471496 DNMT1P26358 1616 aaKnown RBP19.21■□□□□ 0.67
LINC00888-202ENST00000471496 PTPRMP28827 1452 aa19.2■□□□□ 0.66
LINC00888-202ENST00000471496 ABCC5O15440 1437 aa19.2■□□□□ 0.66
LINC00888-202ENST00000471496 MLECQ14165 292 aa19.19■□□□□ 0.66
LINC00888-202ENST00000471496 DAPK1P53355 1430 aa19.17■□□□□ 0.66
LINC00888-202ENST00000471496 TSPY4P0CV99 314 aa19.17■□□□□ 0.66
LINC00888-202ENST00000471496 TSPY10P0CW01 314 aa19.17■□□□□ 0.66
LINC00888-202ENST00000471496 SHANK2Q9UPX8 1470 aa19.17■□□□□ 0.66
LINC00888-202ENST00000471496 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
LINC00888-202ENST00000471496 C3P01024 1663 aa19.09■□□□□ 0.65
LINC00888-202ENST00000471496 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
LINC00888-202ENST00000471496 DUOX2Q9NRD8 1548 aa19.07■□□□□ 0.64
LINC00888-202ENST00000471496 EIF2AK4Q9P2K8 1649 aaKnown RBP19.07■□□□□ 0.64
LINC00888-202ENST00000471496 ADGRL2O95490 1459 aa19.07■□□□□ 0.64
LINC00888-202ENST00000471496 MROH2AA6NES4 1674 aa19.07■□□□□ 0.64
LINC00888-202ENST00000471496 CLTCQ00610 1675 aaKnown RBP19.07■□□□□ 0.64
LINC00888-202ENST00000471496 PTPRKQ15262 1439 aa19.06■□□□□ 0.64
LINC00888-202ENST00000471496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
LINC00888-202ENST00000471496 RNF17Q9BXT8 1623 aaKnown RBP19.06■□□□□ 0.64
LINC00888-202ENST00000471496 KIF15Q9NS87 1388 aa19.05■□□□□ 0.64
LINC00888-202ENST00000471496 NCOA1Q15788 1441 aa19.05■□□□□ 0.64
LINC00888-202ENST00000471496 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
LINC00888-202ENST00000471496 KIF3BO15066 747 aa19.04■□□□□ 0.64
LINC00888-202ENST00000471496 MROH1Q8NDA8 1641 aa19.04■□□□□ 0.64
LINC00888-202ENST00000471496 GGT6Q6P531 493 aa19.03■□□□□ 0.64
LINC00888-202ENST00000471496 CHIC2Q9UKJ5 165 aa19.03■□□□□ 0.64
LINC00888-202ENST00000471496 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
LINC00888-202ENST00000471496 CEBPAP49715 358 aaPredicted RBP19.03■□□□□ 0.64
LINC00888-202ENST00000471496 RRP7BPQ9NSQ0 103 aa19.03■□□□□ 0.64
LINC00888-202ENST00000471496 ANKRD30AQ9BXX3 1397 aa19.01■□□□□ 0.63
LINC00888-202ENST00000471496 ERBINQ96RT1 1412 aa19■□□□□ 0.63
LINC00888-202ENST00000471496 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
LINC00888-202ENST00000471496 DEPDC5O75140 1603 aa18.98■□□□□ 0.63
LINC00888-202ENST00000471496 ZMYM3Q14202 1370 aa18.98■□□□□ 0.63
LINC00888-202ENST00000471496 LMTK3Q96Q04 1460 aa18.98■□□□□ 0.63
LINC00888-202ENST00000471496 SETD1BQ9UPS6 1966 aaKnown RBP18.98■□□□□ 0.63
LINC00888-202ENST00000471496 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
LINC00888-202ENST00000471496 ESF1Q9H501 851 aaKnown RBP18.97■□□□□ 0.63
LINC00888-202ENST00000471496 PREX1Q8TCU6 1659 aa18.96■□□□□ 0.63
LINC00888-202ENST00000471496 PRDM15P57071 1507 aaPredicted RBP18.96■□□□□ 0.63
LINC00888-202ENST00000471496 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
LINC00888-202ENST00000471496 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
LINC00888-202ENST00000471496 ROCK1Q13464 1354 aa18.95■□□□□ 0.62
LINC00888-202ENST00000471496 CEP152O94986 1710 aa18.94■□□□□ 0.62
LINC00888-202ENST00000471496 ABCC3O15438 1527 aa18.93■□□□□ 0.62
LINC00888-202ENST00000471496 NPATQ14207 1427 aa18.92■□□□□ 0.62
LINC00888-202ENST00000471496 ITGAEP38570 1179 aa18.91■□□□□ 0.62
LINC00888-202ENST00000471496 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
LINC00888-202ENST00000471496 VWDEQ8N2E2 1590 aa18.91■□□□□ 0.62
LINC00888-202ENST00000471496 WASHC2CQ9Y4E1 1318 aa18.91■□□□□ 0.62
LINC00888-202ENST00000471496 PZPP20742 1482 aa18.89■□□□□ 0.61
LINC00888-202ENST00000471496 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.61
LINC00888-202ENST00000471496 MYO3AQ8NEV4 1616 aa18.86■□□□□ 0.61
LINC00888-202ENST00000471496 UNC13BO14795 1591 aa18.86■□□□□ 0.61
LINC00888-202ENST00000471496 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
LINC00888-202ENST00000471496 LMTK2Q8IWU2 1503 aa18.85■□□□□ 0.61
LINC00888-202ENST00000471496 FBXO31Q5XUX0 539 aaPredicted RBP18.84■□□□□ 0.61
LINC00888-202ENST00000471496 CFAP65Q6ZU64 1925 aaKnown RBP18.84■□□□□ 0.61
LINC00888-202ENST00000471496 ZNF142P52746 1687 aaPredicted RBP18.84■□□□□ 0.61
LINC00888-202ENST00000471496 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
LINC00888-202ENST00000471496 HSPA2P54652 639 aa18.83■□□□□ 0.6
LINC00888-202ENST00000471496 SPDYE2BA6NHP3 402 aa18.82■□□□□ 0.6
LINC00888-202ENST00000471496 SPDYE6P0CI01 402 aa18.82■□□□□ 0.6
LINC00888-202ENST00000471496 SPDYE2Q495Y8 402 aa18.82■□□□□ 0.6
LINC00888-202ENST00000471496 ARHGAP31Q2M1Z3 1444 aa18.82■□□□□ 0.6
LINC00888-202ENST00000471496 SPATA31D1Q6ZQQ2 1576 aa18.82■□□□□ 0.6
LINC00888-202ENST00000471496 NAIPQ13075 1403 aa18.81■□□□□ 0.6
LINC00888-202ENST00000471496 KANK1Q14678 1352 aa18.8■□□□□ 0.6
LINC00888-202ENST00000471496 MKRN4PQ13434 485 aaPredicted RBP18.79■□□□□ 0.6
LINC00888-202ENST00000471496 ERVK-7P63135 1459 aa18.79■□□□□ 0.6
LINC00888-202ENST00000471496 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
LINC00888-202ENST00000471496 STRCQ7RTU9 1775 aa18.79■□□□□ 0.6
LINC00888-202ENST00000471496 CEP170BQ9Y4F5 1589 aaPredicted RBP18.79■□□□□ 0.6
LINC00888-202ENST00000471496 POTEHQ6S545 545 aa18.78■□□□□ 0.6
LINC00888-202ENST00000471496 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
LINC00888-202ENST00000471496 TNRQ92752 1358 aa18.78■□□□□ 0.6
LINC00888-202ENST00000471496 TET3O43151 1660 aa18.77■□□□□ 0.6
LINC00888-202ENST00000471496 HFM1A2PYH4 1435 aa18.77■□□□□ 0.6
LINC00888-202ENST00000471496 A2ML1A8K2U0 1454 aa18.75■□□□□ 0.59
LINC00888-202ENST00000471496 E9PCH4 1651 aa18.73■□□□□ 0.59
LINC00888-202ENST00000471496 NLRP1Q9C000 1473 aa18.72■□□□□ 0.59
LINC00888-202ENST00000471496 SYNMO15061 1565 aa18.71■□□□□ 0.59
LINC00888-202ENST00000471496 RPRD2Q5VT52 1461 aaKnown RBP18.7■□□□□ 0.58
LINC00888-202ENST00000471496 NOS1P29475 1434 aa18.7■□□□□ 0.58
LINC00888-202ENST00000471496 CHRDL2Q6WN34 429 aa18.7■□□□□ 0.58
LINC00888-202ENST00000471496 REM2Q8IYK8 340 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms