RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 TCOF1Q13428 1488 aaKnown RBP11.92□□□□□ -0.5
TRIM59-204ENST00000471396 MLECQ14165 292 aa11.92□□□□□ -0.5
TRIM59-204ENST00000471396 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
TRIM59-204ENST00000471396 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
TRIM59-204ENST00000471396 CROCC2H7BZ55 1655 aa11.89□□□□□ -0.51
TRIM59-204ENST00000471396 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
TRIM59-204ENST00000471396 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
TRIM59-204ENST00000471396 DNMT1P26358 1616 aaKnown RBP11.88□□□□□ -0.51
TRIM59-204ENST00000471396 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
TRIM59-204ENST00000471396 DHX29Q7Z478 1369 aaKnown RBP11.87□□□□□ -0.51
TRIM59-204ENST00000471396 ABCC5O15440 1437 aa11.86□□□□□ -0.51
TRIM59-204ENST00000471396 DAPK1P53355 1430 aa11.86□□□□□ -0.51
TRIM59-204ENST00000471396 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
TRIM59-204ENST00000471396 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
TRIM59-204ENST00000471396 ESF1Q9H501 851 aaKnown RBP11.83□□□□□ -0.52
TRIM59-204ENST00000471396 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
TRIM59-204ENST00000471396 FAM135AQ9P2D6 1515 aa11.82□□□□□ -0.52
TRIM59-204ENST00000471396 C3P01024 1663 aa11.82□□□□□ -0.52
TRIM59-204ENST00000471396 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
TRIM59-204ENST00000471396 KIF15Q9NS87 1388 aa11.81□□□□□ -0.52
TRIM59-204ENST00000471396 FAM50AQ14320 339 aaKnown RBP11.81□□□□□ -0.52
TRIM59-204ENST00000471396 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
TRIM59-204ENST00000471396 CLTCQ00610 1675 aaKnown RBP11.81□□□□□ -0.52
TRIM59-204ENST00000471396 KIF3BO15066 747 aa11.8□□□□□ -0.52
TRIM59-204ENST00000471396 GGT6Q6P531 493 aa11.8□□□□□ -0.52
TRIM59-204ENST00000471396 ADGRL2O95490 1459 aa11.8□□□□□ -0.52
TRIM59-204ENST00000471396 LMTK3Q96Q04 1460 aa11.8□□□□□ -0.52
TRIM59-204ENST00000471396 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
TRIM59-204ENST00000471396 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
TRIM59-204ENST00000471396 ERBINQ96RT1 1412 aa11.79□□□□□ -0.52
TRIM59-204ENST00000471396 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
TRIM59-204ENST00000471396 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
TRIM59-204ENST00000471396 PPARGC1BQ86YN6 1023 aaKnown RBP11.79□□□□□ -0.52
TRIM59-204ENST00000471396 KDM5DQ9BY66 1539 aa11.79□□□□□ -0.52
TRIM59-204ENST00000471396 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
TRIM59-204ENST00000471396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRIM59-204ENST00000471396 MROH1Q8NDA8 1641 aa11.77□□□□□ -0.53
TRIM59-204ENST00000471396 ZMYM3Q14202 1370 aa11.77□□□□□ -0.53
TRIM59-204ENST00000471396 NPATQ14207 1427 aa11.77□□□□□ -0.53
TRIM59-204ENST00000471396 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
TRIM59-204ENST00000471396 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
TRIM59-204ENST00000471396 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
TRIM59-204ENST00000471396 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
TRIM59-204ENST00000471396 RRBP1Q9P2E9 1410 aaKnown RBP11.76□□□□□ -0.53
TRIM59-204ENST00000471396 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
TRIM59-204ENST00000471396 RRP7BPQ9NSQ0 103 aa11.75□□□□□ -0.53
TRIM59-204ENST00000471396 CHIC2Q9UKJ5 165 aa11.75□□□□□ -0.53
TRIM59-204ENST00000471396 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
TRIM59-204ENST00000471396 ABCC3O15438 1527 aa11.75□□□□□ -0.53
TRIM59-204ENST00000471396 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
TRIM59-204ENST00000471396 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
TRIM59-204ENST00000471396 PZPP20742 1482 aa11.73□□□□□ -0.53
TRIM59-204ENST00000471396 ROCK1Q13464 1354 aa11.73□□□□□ -0.53
TRIM59-204ENST00000471396 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
TRIM59-204ENST00000471396 CEP152O94986 1710 aa11.72□□□□□ -0.53
TRIM59-204ENST00000471396 MYO3AQ8NEV4 1616 aa11.71□□□□□ -0.53
TRIM59-204ENST00000471396 ANKRD50Q9ULJ7 1429 aa11.71□□□□□ -0.53
TRIM59-204ENST00000471396 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.54
TRIM59-204ENST00000471396 HSPA2P54652 639 aa11.7□□□□□ -0.54
TRIM59-204ENST00000471396 ZNF142P52746 1687 aaPredicted RBP11.7□□□□□ -0.54
TRIM59-204ENST00000471396 VWDEQ8N2E2 1590 aa11.69□□□□□ -0.54
TRIM59-204ENST00000471396 KANK1Q14678 1352 aa11.68□□□□□ -0.54
TRIM59-204ENST00000471396 CEP170BQ9Y4F5 1589 aaPredicted RBP11.68□□□□□ -0.54
TRIM59-204ENST00000471396 ITGAEP38570 1179 aa11.68□□□□□ -0.54
TRIM59-204ENST00000471396 TNRQ92752 1358 aa11.67□□□□□ -0.54
TRIM59-204ENST00000471396 LMTK2Q8IWU2 1503 aa11.67□□□□□ -0.54
TRIM59-204ENST00000471396 ARHGAP31Q2M1Z3 1444 aa11.67□□□□□ -0.54
TRIM59-204ENST00000471396 UNC13BO14795 1591 aa11.67□□□□□ -0.54
TRIM59-204ENST00000471396 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
TRIM59-204ENST00000471396 ERVK-7P63135 1459 aa11.66□□□□□ -0.54
TRIM59-204ENST00000471396 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
TRIM59-204ENST00000471396 A2ML1A8K2U0 1454 aa11.65□□□□□ -0.54
TRIM59-204ENST00000471396 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
TRIM59-204ENST00000471396 EFCAB6Q5THR3 1501 aa11.64□□□□□ -0.55
TRIM59-204ENST00000471396 GCC2Q8IWJ2 1684 aa11.63□□□□□ -0.55
TRIM59-204ENST00000471396 STRCQ7RTU9 1775 aa11.63□□□□□ -0.55
TRIM59-204ENST00000471396 CFAP65Q6ZU64 1925 aaKnown RBP11.62□□□□□ -0.55
TRIM59-204ENST00000471396 TET3O43151 1660 aa11.62□□□□□ -0.55
TRIM59-204ENST00000471396 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
TRIM59-204ENST00000471396 IQGAP3Q86VI3 1631 aa11.61□□□□□ -0.55
TRIM59-204ENST00000471396 HFM1A2PYH4 1435 aa11.6□□□□□ -0.55
TRIM59-204ENST00000471396 NAIPQ13075 1403 aa11.6□□□□□ -0.55
TRIM59-204ENST00000471396 RPRD2Q5VT52 1461 aaKnown RBP11.6□□□□□ -0.55
TRIM59-204ENST00000471396 DSG3P32926 999 aa11.6□□□□□ -0.55
TRIM59-204ENST00000471396 UGGT1Q9NYU2 1555 aa11.59□□□□□ -0.55
TRIM59-204ENST00000471396 CAPN15O75808 1086 aa11.58□□□□□ -0.56
TRIM59-204ENST00000471396 PTPRTO14522 1441 aa11.58□□□□□ -0.56
TRIM59-204ENST00000471396 NOS1P29475 1434 aa11.58□□□□□ -0.56
TRIM59-204ENST00000471396 SYNMO15061 1565 aa11.58□□□□□ -0.56
TRIM59-204ENST00000471396 NUP155O75694 1391 aa11.57□□□□□ -0.56
TRIM59-204ENST00000471396 POLR1AO95602 1720 aaPredicted RBP11.56□□□□□ -0.56
TRIM59-204ENST00000471396 UBR1Q8IWV7 1749 aa11.56□□□□□ -0.56
TRIM59-204ENST00000471396 E9PCH4 1651 aa11.55□□□□□ -0.56
TRIM59-204ENST00000471396 PKD2Q13563 968 aa11.55□□□□□ -0.56
TRIM59-204ENST00000471396 THEMISQ8N1K5 641 aaPredicted RBP11.55□□□□□ -0.56
TRIM59-204ENST00000471396 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
TRIM59-204ENST00000471396 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
TRIM59-204ENST00000471396 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
TRIM59-204ENST00000471396 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
TRIM59-204ENST00000471396 ADGRB3O60242 1522 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms