RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ADAMTSL3P82987 1691 aa18.93■□□□□ 0.62
SPTLC1-204ENST00000469778 KANK1Q14678 1352 aa18.93■□□□□ 0.62
SPTLC1-204ENST00000469778 NAIPQ13075 1403 aa18.92■□□□□ 0.62
SPTLC1-204ENST00000469778 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
SPTLC1-204ENST00000469778 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
SPTLC1-204ENST00000469778 HRCP23327 699 aa18.9■□□□□ 0.62
SPTLC1-204ENST00000469778 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.62
SPTLC1-204ENST00000469778 KDM5DQ9BY66 1539 aa18.87■□□□□ 0.61
SPTLC1-204ENST00000469778 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
SPTLC1-204ENST00000469778 ZMYM3Q14202 1370 aa18.85■□□□□ 0.61
SPTLC1-204ENST00000469778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
SPTLC1-204ENST00000469778 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
SPTLC1-204ENST00000469778 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
SPTLC1-204ENST00000469778 PTPRMP28827 1452 aa18.84■□□□□ 0.61
SPTLC1-204ENST00000469778 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
SPTLC1-204ENST00000469778 GCC2Q8IWJ2 1684 aa18.82■□□□□ 0.6
SPTLC1-204ENST00000469778 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
SPTLC1-204ENST00000469778 NUP155O75694 1391 aa18.81■□□□□ 0.6
SPTLC1-204ENST00000469778 LMTK2Q8IWU2 1503 aa18.81■□□□□ 0.6
SPTLC1-204ENST00000469778 MROH2AA6NES4 1674 aa18.81■□□□□ 0.6
SPTLC1-204ENST00000469778 ZC3H13Q5T200 1668 aaKnown RBP18.81■□□□□ 0.6
SPTLC1-204ENST00000469778 MROH1Q8NDA8 1641 aa18.8■□□□□ 0.6
SPTLC1-204ENST00000469778 ARHGAP31Q2M1Z3 1444 aa18.8■□□□□ 0.6
SPTLC1-204ENST00000469778 VWDEQ8N2E2 1590 aa18.8■□□□□ 0.6
SPTLC1-204ENST00000469778 ABCC3O15438 1527 aa18.79■□□□□ 0.6
SPTLC1-204ENST00000469778 UNC13BO14795 1591 aa18.79■□□□□ 0.6
SPTLC1-204ENST00000469778 NPATQ14207 1427 aa18.78■□□□□ 0.6
SPTLC1-204ENST00000469778 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
SPTLC1-204ENST00000469778 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
SPTLC1-204ENST00000469778 RIMS1Q86UR5 1692 aaKnown RBP18.76■□□□□ 0.59
SPTLC1-204ENST00000469778 PZPP20742 1482 aa18.76■□□□□ 0.59
SPTLC1-204ENST00000469778 RPRD2Q5VT52 1461 aaKnown RBP18.75■□□□□ 0.59
SPTLC1-204ENST00000469778 CLTCQ00610 1675 aaKnown RBP18.75■□□□□ 0.59
SPTLC1-204ENST00000469778 RAB3GAP2Q9H2M9 1393 aa18.74■□□□□ 0.59
SPTLC1-204ENST00000469778 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
SPTLC1-204ENST00000469778 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
SPTLC1-204ENST00000469778 IQGAP3Q86VI3 1631 aa18.72■□□□□ 0.59
SPTLC1-204ENST00000469778 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
SPTLC1-204ENST00000469778 C3P01024 1663 aa18.69■□□□□ 0.58
SPTLC1-204ENST00000469778 CAMSAP1Q5T5Y3 1602 aa18.69■□□□□ 0.58
SPTLC1-204ENST00000469778 TET3O43151 1660 aa18.69■□□□□ 0.58
SPTLC1-204ENST00000469778 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
SPTLC1-204ENST00000469778 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
SPTLC1-204ENST00000469778 FBXO31Q5XUX0 539 aaPredicted RBP18.67■□□□□ 0.58
SPTLC1-204ENST00000469778 SLC52A1Q9NWF4 448 aa18.67■□□□□ 0.58
SPTLC1-204ENST00000469778 TNRQ92752 1358 aa18.67■□□□□ 0.58
SPTLC1-204ENST00000469778 CEP152O94986 1710 aa18.66■□□□□ 0.58
SPTLC1-204ENST00000469778 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
SPTLC1-204ENST00000469778 PKD2Q13563 968 aa18.65■□□□□ 0.58
SPTLC1-204ENST00000469778 SPATA31D1Q6ZQQ2 1576 aa18.64■□□□□ 0.58
SPTLC1-204ENST00000469778 NOS1P29475 1434 aa18.64■□□□□ 0.57
SPTLC1-204ENST00000469778 ERVK-7P63135 1459 aa18.64■□□□□ 0.57
SPTLC1-204ENST00000469778 UHRF1BP1Q6BDS2 1440 aa18.63■□□□□ 0.57
SPTLC1-204ENST00000469778 NLRP1Q9C000 1473 aa18.63■□□□□ 0.57
SPTLC1-204ENST00000469778 PTPRTO14522 1441 aa18.6■□□□□ 0.57
SPTLC1-204ENST00000469778 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
SPTLC1-204ENST00000469778 PREX1Q8TCU6 1659 aa18.58■□□□□ 0.57
SPTLC1-204ENST00000469778 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.56
SPTLC1-204ENST00000469778 A2ML1A8K2U0 1454 aa18.57■□□□□ 0.56
SPTLC1-204ENST00000469778 E9PCH4 1651 aa18.57■□□□□ 0.56
SPTLC1-204ENST00000469778 IDI1Q13907 227 aa18.56■□□□□ 0.56
SPTLC1-204ENST00000469778 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
SPTLC1-204ENST00000469778 LMTK3Q96Q04 1460 aa18.52■□□□□ 0.56
SPTLC1-204ENST00000469778 HDGFP51858 240 aaKnown RBP18.52■□□□□ 0.56
SPTLC1-204ENST00000469778 CFAP65Q6ZU64 1925 aaKnown RBP18.51■□□□□ 0.55
SPTLC1-204ENST00000469778 MYO3AQ8NEV4 1616 aa18.51■□□□□ 0.55
SPTLC1-204ENST00000469778 CEP170BQ9Y4F5 1589 aaPredicted RBP18.51■□□□□ 0.55
SPTLC1-204ENST00000469778 TRPM2O94759 1503 aa18.5■□□□□ 0.55
SPTLC1-204ENST00000469778 PLA2R1Q13018 1463 aa18.5■□□□□ 0.55
SPTLC1-204ENST00000469778 SYNMO15061 1565 aa18.5■□□□□ 0.55
SPTLC1-204ENST00000469778 UGGT1Q9NYU2 1555 aa18.49■□□□□ 0.55
SPTLC1-204ENST00000469778 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
SPTLC1-204ENST00000469778 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
SPTLC1-204ENST00000469778 SPHKAPQ2M3C7 1700 aa18.48■□□□□ 0.55
SPTLC1-204ENST00000469778 CCDC144AA2RUR9 1427 aa18.48■□□□□ 0.55
SPTLC1-204ENST00000469778 ANKRD30BQ9BXX2 1392 aa18.47■□□□□ 0.55
SPTLC1-204ENST00000469778 FOXD1Q16676 465 aa18.47■□□□□ 0.55
SPTLC1-204ENST00000469778 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
SPTLC1-204ENST00000469778 PIK3C2BO00750 1634 aa18.47■□□□□ 0.55
SPTLC1-204ENST00000469778 ANKLE2Q86XL3 938 aa18.46■□□□□ 0.55
SPTLC1-204ENST00000469778 EID1Q9Y6B2 187 aa18.45■□□□□ 0.54
SPTLC1-204ENST00000469778 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPTLC1-204ENST00000469778 RPGRIP1LQ68CZ1 1315 aa18.44■□□□□ 0.54
SPTLC1-204ENST00000469778 TMEM2Q9UHN6 1383 aa18.43■□□□□ 0.54
SPTLC1-204ENST00000469778 HSPA2P54652 639 aa18.43■□□□□ 0.54
SPTLC1-204ENST00000469778 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
SPTLC1-204ENST00000469778 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
SPTLC1-204ENST00000469778 DHX57Q6P158 1386 aaKnown RBP18.42■□□□□ 0.54
SPTLC1-204ENST00000469778 STAC3Q96MF2 364 aa18.41■□□□□ 0.54
SPTLC1-204ENST00000469778 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
SPTLC1-204ENST00000469778 SLIT1O75093 1534 aa18.4■□□□□ 0.54
SPTLC1-204ENST00000469778 NEURL4Q96JN8 1562 aa18.4■□□□□ 0.54
SPTLC1-204ENST00000469778 TXNDC2Q86VQ3 553 aa18.4■□□□□ 0.54
SPTLC1-204ENST00000469778 TMEM131LA2VDJ0 1609 aa18.4■□□□□ 0.54
SPTLC1-204ENST00000469778 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
SPTLC1-204ENST00000469778 ARHGAP23Q9P227 1491 aa18.39■□□□□ 0.54
SPTLC1-204ENST00000469778 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
SPTLC1-204ENST00000469778 VGFO15240 615 aaPredicted RBP18.37■□□□□ 0.53
SPTLC1-204ENST00000469778 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
SPTLC1-204ENST00000469778 SPATA31E1Q6ZUB1 1445 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 204.6 ms