RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-205	ENST00000469641	IQGAP2	Q13576	1575 aa		13.65	□□□□□ -0.22
ATP13A1-205	ENST00000469641	SCAPER	Q9BY12	1400 aa		13.65	□□□□□ -0.22
ATP13A1-205	ENST00000469641	EFCAB5	A4FU69	1503 aa		13.65	□□□□□ -0.22
ATP13A1-205	ENST00000469641	CCDC184	Q52MB2	194 aa		13.64	□□□□□ -0.23
ATP13A1-205	ENST00000469641	RCAN3	Q9UKA8	241 aa		13.64	□□□□□ -0.23
ATP13A1-205	ENST00000469641	ARHGAP5	Q13017	1502 aa		13.64	□□□□□ -0.23
ATP13A1-205	ENST00000469641	KIF7	Q2M1P5	1343 aa		13.64	□□□□□ -0.23
ATP13A1-205	ENST00000469641	NAIP	Q13075	1403 aa		13.63	□□□□□ -0.23
ATP13A1-205	ENST00000469641	PANK3	Q9H999	370 aa		13.63	□□□□□ -0.23
ATP13A1-205	ENST00000469641	MSH5	O43196	834 aa		13.63	□□□□□ -0.23
ATP13A1-205	ENST00000469641	MORC1	Q86VD1	984 aa		13.63	□□□□□ -0.23
ATP13A1-205	ENST00000469641	USP47	Q96K76	1375 aa		13.61	□□□□□ -0.23
ATP13A1-205	ENST00000469641	CCDC146	Q8IYE0	955 aa		13.61	□□□□□ -0.23
ATP13A1-205	ENST00000469641	CFAP70	Q5T0N1	1121 aa		13.6	□□□□□ -0.23
ATP13A1-205	ENST00000469641	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ATP13A1-205	ENST00000469641	FRAT1	Q92837	279 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP13A1-205	ENST00000469641	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP13A1-205	ENST00000469641	TCERG1	O14776	1098 aa	Known RBP	13.59	□□□□□ -0.23
ATP13A1-205	ENST00000469641	RALBP1	Q15311	655 aa		13.59	□□□□□ -0.23
ATP13A1-205	ENST00000469641	CFAP53	Q96M91	514 aa		13.58	□□□□□ -0.24
ATP13A1-205	ENST00000469641	C9orf84	Q5VXU9	1444 aa		13.58	□□□□□ -0.24
ATP13A1-205	ENST00000469641	PAK3	O75914	559 aa	Predicted RBP	13.58	□□□□□ -0.24
ATP13A1-205	ENST00000469641	NCL	P19338	710 aa	Known RBP	13.57	□□□□□ -0.24
ATP13A1-205	ENST00000469641	HDGF	P51858	240 aa	Known RBP	13.57	□□□□□ -0.24
ATP13A1-205	ENST00000469641	SPRYD3	Q8NCJ5	442 aa		13.57	□□□□□ -0.24
ATP13A1-205	ENST00000469641	KIF21A	Q7Z4S6	1674 aa		13.57	□□□□□ -0.24
ATP13A1-205	ENST00000469641	PTPRK	Q15262	1439 aa		13.57	□□□□□ -0.24
ATP13A1-205	ENST00000469641	SLK	Q9H2G2	1235 aa	Predicted RBP	13.56	□□□□□ -0.24
ATP13A1-205	ENST00000469641	SLC4A3	P48751	1232 aa		13.56	□□□□□ -0.24
ATP13A1-205	ENST00000469641	DAPK1	P53355	1430 aa		13.55	□□□□□ -0.24
ATP13A1-205	ENST00000469641	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.55	□□□□□ -0.24
ATP13A1-205	ENST00000469641	GZF1	Q9H116	711 aa	Predicted RBP	13.55	□□□□□ -0.24
ATP13A1-205	ENST00000469641	EXOC6	Q8TAG9	804 aa		13.55	□□□□□ -0.24
ATP13A1-205	ENST00000469641	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.55	□□□□□ -0.24
ATP13A1-205	ENST00000469641	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.54	□□□□□ -0.24
ATP13A1-205	ENST00000469641	HAP1	P54257	671 aa	Predicted RBP	13.54	□□□□□ -0.24
ATP13A1-205	ENST00000469641	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
ATP13A1-205	ENST00000469641	PNN	Q9H307	717 aa	Known RBP	13.54	□□□□□ -0.24
ATP13A1-205	ENST00000469641	KTN1	Q86UP2	1357 aa	Known RBP	13.54	□□□□□ -0.24
ATP13A1-205	ENST00000469641	C11orf95	C9JLR9	678 aa	Predicted RBP	13.54	□□□□□ -0.24
ATP13A1-205	ENST00000469641	RRP7A	Q9Y3A4	280 aa	Known RBP	13.54	□□□□□ -0.24
ATP13A1-205	ENST00000469641	PLIN1	O60240	522 aa		13.53	□□□□□ -0.24
ATP13A1-205	ENST00000469641	THOC2	Q8NI27	1593 aa	Known RBP	13.53	□□□□□ -0.24
ATP13A1-205	ENST00000469641	EHBP1L1	Q8N3D4	1523 aa		13.53	□□□□□ -0.24
ATP13A1-205	ENST00000469641	IL27	Q8NEV9	243 aa		13.53	□□□□□ -0.24
ATP13A1-205	ENST00000469641	CUL7	Q14999	1698 aa		13.53	□□□□□ -0.24
ATP13A1-205	ENST00000469641	PDE4A	P27815	886 aa		13.53	□□□□□ -0.24
ATP13A1-205	ENST00000469641	NLRP13	Q86W25	1043 aa		13.53	□□□□□ -0.24
ATP13A1-205	ENST00000469641	L1TD1	Q5T7N2	865 aa	Known RBP	13.52	□□□□□ -0.24
ATP13A1-205	ENST00000469641	ABCC5	O15440	1437 aa		13.52	□□□□□ -0.24
ATP13A1-205	ENST00000469641	GOLGA6L22	H0YM25	854 aa		13.52	□□□□□ -0.25
ATP13A1-205	ENST00000469641	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.52	□□□□□ -0.25
ATP13A1-205	ENST00000469641	MAPK8IP3	Q9UPT6	1336 aa		13.51	□□□□□ -0.25
ATP13A1-205	ENST00000469641	MIA2	Q96PC5	1412 aa		13.51	□□□□□ -0.25
ATP13A1-205	ENST00000469641	USP35	Q9P2H5	1018 aa		13.51	□□□□□ -0.25
ATP13A1-205	ENST00000469641	HECW1	Q76N89	1606 aa		13.51	□□□□□ -0.25
ATP13A1-205	ENST00000469641	PDE3B	Q13370	1112 aa		13.5	□□□□□ -0.25
ATP13A1-205	ENST00000469641	RRP1	P56182	461 aa	Known RBP	13.5	□□□□□ -0.25
ATP13A1-205	ENST00000469641	GSE1	Q14687	1217 aa		13.5	□□□□□ -0.25
ATP13A1-205	ENST00000469641	PTPN23	Q9H3S7	1636 aa		13.5	□□□□□ -0.25
ATP13A1-205	ENST00000469641	AKNA	Q7Z591	1439 aa		13.49	□□□□□ -0.25
ATP13A1-205	ENST00000469641	VGF	O15240	615 aa	Predicted RBP	13.49	□□□□□ -0.25
ATP13A1-205	ENST00000469641	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.49	□□□□□ -0.25
ATP13A1-205	ENST00000469641	PTMA	P06454	111 aa	Known RBP	13.48	□□□□□ -0.25
ATP13A1-205	ENST00000469641	CABP2	Q9NPB3	220 aa		13.48	□□□□□ -0.25
ATP13A1-205	ENST00000469641	LTV1	Q96GA3	475 aa	Predicted RBP	13.47	□□□□□ -0.25
ATP13A1-205	ENST00000469641	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.47	□□□□□ -0.25
ATP13A1-205	ENST00000469641	ARID3A	Q99856	593 aa		13.47	□□□□□ -0.25
ATP13A1-205	ENST00000469641	ATP10B	O94823	1461 aa		13.47	□□□□□ -0.25
ATP13A1-205	ENST00000469641	FTSJ3	Q8IY81	847 aa	Known RBP	13.47	□□□□□ -0.25
ATP13A1-205	ENST00000469641	VSIG10	Q8N0Z9	540 aa		13.47	□□□□□ -0.25
ATP13A1-205	ENST00000469641	NUP153	P49790	1475 aa	Known RBP	13.46	□□□□□ -0.25
ATP13A1-205	ENST00000469641	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.46	□□□□□ -0.25
ATP13A1-205	ENST00000469641	SMG6	Q86US8	1419 aa	Known RBP	13.46	□□□□□ -0.26
ATP13A1-205	ENST00000469641	NCOA1	Q15788	1441 aa		13.45	□□□□□ -0.26
ATP13A1-205	ENST00000469641	TPRN	Q4KMQ1	711 aa		13.45	□□□□□ -0.26
ATP13A1-205	ENST00000469641	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.45	□□□□□ -0.26
ATP13A1-205	ENST00000469641	EID1	Q9Y6B2	187 aa		13.45	□□□□□ -0.26
ATP13A1-205	ENST00000469641	CAMSAP2	Q08AD1	1489 aa		13.45	□□□□□ -0.26
ATP13A1-205	ENST00000469641	NGDN	Q8NEJ9	315 aa	Known RBP	13.44	□□□□□ -0.26
ATP13A1-205	ENST00000469641	PNISR	Q8TF01	805 aa	Known RBP	13.44	□□□□□ -0.26
ATP13A1-205	ENST00000469641	ANKRD30B	Q9BXX2	1392 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	CEBPA	P49715	358 aa	Predicted RBP	13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	KIAA1107	Q9UPP5	1409 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	SLC12A5	Q9H2X9	1139 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	CFAP43	Q8NDM7	1665 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	CLUAP1	Q96AJ1	413 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	SLC26A8	Q96RN1	970 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	BCL2L13	Q9BXK5	485 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	RSPH6A	Q9H0K4	717 aa		13.43	□□□□□ -0.26
ATP13A1-205	ENST00000469641	GGNBP2	Q9H3C7	697 aa		13.42	□□□□□ -0.26
ATP13A1-205	ENST00000469641	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.42	□□□□□ -0.26
ATP13A1-205	ENST00000469641	ELL2	O00472	640 aa	Predicted RBP	13.42	□□□□□ -0.26
ATP13A1-205	ENST00000469641	NUTM2G	Q5VZR2	741 aa		13.42	□□□□□ -0.26
ATP13A1-205	ENST00000469641	CRBN	Q96SW2	442 aa		13.42	□□□□□ -0.26
ATP13A1-205	ENST00000469641	BRPF3	Q9ULD4	1205 aa		13.42	□□□□□ -0.26
ATP13A1-205	ENST00000469641	CD109	Q6YHK3	1445 aa		13.42	□□□□□ -0.26
ATP13A1-205	ENST00000469641	HSP90AB1	P08238	724 aa	Known RBP	13.41	□□□□□ -0.26
ATP13A1-205	ENST00000469641	RBM33	Q96EV2	1170 aa	Known RBP	13.41	□□□□□ -0.26
ATP13A1-205	ENST00000469641	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms