RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
VARS2-205ENST00000469358 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
VARS2-205ENST00000469358 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
VARS2-205ENST00000469358 UHRF1BP1Q6BDS2 1440 aa16.16■□□□□ 0.18
VARS2-205ENST00000469358 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
VARS2-205ENST00000469358 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
VARS2-205ENST00000469358 RALBP1Q15311 655 aa16.14■□□□□ 0.17
VARS2-205ENST00000469358 BRD4O60885 1362 aaPredicted RBP16.14■□□□□ 0.17
VARS2-205ENST00000469358 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
VARS2-205ENST00000469358 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
VARS2-205ENST00000469358 ATP10BO94823 1461 aa16.12■□□□□ 0.17
VARS2-205ENST00000469358 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
VARS2-205ENST00000469358 CROCC2H7BZ55 1655 aa16.11■□□□□ 0.17
VARS2-205ENST00000469358 PER1O15534 1290 aaPredicted RBP16.11■□□□□ 0.17
VARS2-205ENST00000469358 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
VARS2-205ENST00000469358 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
VARS2-205ENST00000469358 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
VARS2-205ENST00000469358 PANK3Q9H999 370 aa16.1■□□□□ 0.17
VARS2-205ENST00000469358 KTN1Q86UP2 1357 aaKnown RBP16.1■□□□□ 0.17
VARS2-205ENST00000469358 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
VARS2-205ENST00000469358 CDC42BPAQ5VT25 1732 aa16.09■□□□□ 0.17
VARS2-205ENST00000469358 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
VARS2-205ENST00000469358 PDE4AP27815 886 aa16.09■□□□□ 0.17
VARS2-205ENST00000469358 C20orf194Q5TEA3 1177 aa16.08■□□□□ 0.16
VARS2-205ENST00000469358 CRBNQ96SW2 442 aa16.07■□□□□ 0.16
VARS2-205ENST00000469358 PARD3Q8TEW0 1356 aa16.06■□□□□ 0.16
VARS2-205ENST00000469358 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
VARS2-205ENST00000469358 CCDC144AA2RUR9 1427 aa16.05■□□□□ 0.16
VARS2-205ENST00000469358 RTL5Q5HYW3 569 aaPredicted RBP16.05■□□□□ 0.16
VARS2-205ENST00000469358 TESK2Q96S53 571 aa16.05■□□□□ 0.16
VARS2-205ENST00000469358 ARHGEF12Q9NZN5 1544 aa16.05■□□□□ 0.16
VARS2-205ENST00000469358 PRAG1Q86YV5 1406 aa16.05■□□□□ 0.16
VARS2-205ENST00000469358 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
VARS2-205ENST00000469358 FAM135AQ9P2D6 1515 aa16.03■□□□□ 0.16
VARS2-205ENST00000469358 KDM5DQ9BY66 1539 aa16.02■□□□□ 0.16
VARS2-205ENST00000469358 PLA2R1Q13018 1463 aa16.02■□□□□ 0.16
VARS2-205ENST00000469358 BACH2Q9BYV9 841 aa16.02■□□□□ 0.15
VARS2-205ENST00000469358 ADAMTS8Q9UP79 889 aa16.02■□□□□ 0.15
VARS2-205ENST00000469358 PTPRGP23470 1445 aa16.02■□□□□ 0.15
VARS2-205ENST00000469358 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
VARS2-205ENST00000469358 TCERG1O14776 1098 aaKnown RBP16.01■□□□□ 0.15
VARS2-205ENST00000469358 SHANK2Q9UPX8 1470 aa16.01■□□□□ 0.15
VARS2-205ENST00000469358 ABCA8O94911 1581 aa16.01■□□□□ 0.15
VARS2-205ENST00000469358 SLC4A3P48751 1232 aa16■□□□□ 0.15
VARS2-205ENST00000469358 A2MP01023 1474 aa16■□□□□ 0.15
VARS2-205ENST00000469358 NUP160Q12769 1436 aa15.99■□□□□ 0.15
VARS2-205ENST00000469358 E9PCH4 1651 aa15.98■□□□□ 0.15
VARS2-205ENST00000469358 NEFMP07197 916 aa15.98■□□□□ 0.15
VARS2-205ENST00000469358 PDE3BQ13370 1112 aa15.97■□□□□ 0.15
VARS2-205ENST00000469358 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
VARS2-205ENST00000469358 SAMD9LQ8IVG5 1584 aa15.97■□□□□ 0.15
VARS2-205ENST00000469358 CCDC141Q6ZP82 1450 aa15.96■□□□□ 0.15
VARS2-205ENST00000469358 RTN4Q9NQC3 1192 aaKnown RBP15.96■□□□□ 0.14
VARS2-205ENST00000469358 ERBINQ96RT1 1412 aa15.95■□□□□ 0.14
VARS2-205ENST00000469358 TMF1P82094 1093 aa15.95■□□□□ 0.14
VARS2-205ENST00000469358 TRPM1Q7Z4N2 1603 aa15.95■□□□□ 0.14
VARS2-205ENST00000469358 CCDC146Q8IYE0 955 aa15.95■□□□□ 0.14
VARS2-205ENST00000469358 SYCP2Q9BX26 1530 aa15.95■□□□□ 0.14
VARS2-205ENST00000469358 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
VARS2-205ENST00000469358 COL17A1Q9UMD9 1497 aaPredicted RBP15.94■□□□□ 0.14
VARS2-205ENST00000469358 PLEKHH1Q9ULM0 1364 aa15.93■□□□□ 0.14
VARS2-205ENST00000469358 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
VARS2-205ENST00000469358 GPRASP1Q5JY77 1395 aa15.91■□□□□ 0.14
VARS2-205ENST00000469358 ARHGAP5Q13017 1502 aa15.9■□□□□ 0.14
VARS2-205ENST00000469358 CDC42BPBQ9Y5S2 1711 aa15.9■□□□□ 0.14
VARS2-205ENST00000469358 KNSTRNQ9Y448 316 aa15.9■□□□□ 0.14
VARS2-205ENST00000469358 BLMP54132 1417 aaPredicted RBP15.9■□□□□ 0.14
VARS2-205ENST00000469358 WDR43Q15061 677 aaKnown RBP eCLIP15.9■□□□□ 0.14
VARS2-205ENST00000469358 MS4A1P11836 297 aa15.89■□□□□ 0.13
VARS2-205ENST00000469358 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
VARS2-205ENST00000469358 RGS3P49796 1198 aa15.89■□□□□ 0.13
VARS2-205ENST00000469358 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
VARS2-205ENST00000469358 ARHGEF5Q12774 1597 aa15.89■□□□□ 0.13
VARS2-205ENST00000469358 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
VARS2-205ENST00000469358 PRDM15P57071 1507 aaPredicted RBP15.86■□□□□ 0.13
VARS2-205ENST00000469358 TTC37Q6PGP7 1564 aa15.86■□□□□ 0.13
VARS2-205ENST00000469358 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
VARS2-205ENST00000469358 RSPH4AQ5TD94 716 aa15.85■□□□□ 0.13
VARS2-205ENST00000469358 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
VARS2-205ENST00000469358 WASHC2CQ9Y4E1 1318 aa15.84■□□□□ 0.13
VARS2-205ENST00000469358 BCAR3O75815 825 aa15.84■□□□□ 0.13
VARS2-205ENST00000469358 KDM2BQ8NHM5 1336 aa15.84■□□□□ 0.13
VARS2-205ENST00000469358 APAF1O14727 1248 aa15.84■□□□□ 0.13
VARS2-205ENST00000469358 WDR7Q9Y4E6 1490 aa15.83■□□□□ 0.12
VARS2-205ENST00000469358 GOLGA2Q08379 1002 aa15.83■□□□□ 0.12
VARS2-205ENST00000469358 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
VARS2-205ENST00000469358 ZMYM4Q5VZL5 1548 aa15.83■□□□□ 0.12
VARS2-205ENST00000469358 PREX2Q70Z35 1606 aa15.83■□□□□ 0.12
VARS2-205ENST00000469358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.81■□□□□ 0.12
VARS2-205ENST00000469358 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
VARS2-205ENST00000469358 C8orf34Q49A92 452 aa15.79■□□□□ 0.12
VARS2-205ENST00000469358 ZNF521Q96K83 1311 aa15.79■□□□□ 0.12
VARS2-205ENST00000469358 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
VARS2-205ENST00000469358 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
VARS2-205ENST00000469358 SLFN5Q08AF3 891 aa15.78■□□□□ 0.12
VARS2-205ENST00000469358 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
VARS2-205ENST00000469358 UNC13BO14795 1591 aa15.78■□□□□ 0.12
VARS2-205ENST00000469358 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
VARS2-205ENST00000469358 NFKBIBQ15653 356 aa15.78■□□□□ 0.12
VARS2-205ENST00000469358 CENPQQ7L2Z9 268 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms