RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 TNRQ92752 1358 aa21.18■□□□□ 0.98
HDAC6-217ENST00000469223 MED14O60244 1454 aa21.17■□□□□ 0.98
HDAC6-217ENST00000469223 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
HDAC6-217ENST00000469223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDAC6-217ENST00000469223 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
HDAC6-217ENST00000469223 XIRP1Q702N8 1843 aaKnown RBP21.15■□□□□ 0.98
HDAC6-217ENST00000469223 POTEAQ6S8J7 498 aa21.14■□□□□ 0.97
HDAC6-217ENST00000469223 UGGT1Q9NYU2 1555 aa21.14■□□□□ 0.97
HDAC6-217ENST00000469223 PZPP20742 1482 aa21.13■□□□□ 0.97
HDAC6-217ENST00000469223 ZC3H13Q5T200 1668 aaKnown RBP21.12■□□□□ 0.97
HDAC6-217ENST00000469223 KDM5DQ9BY66 1539 aa21.11■□□□□ 0.97
HDAC6-217ENST00000469223 HNRNPMP52272 730 aaKnown RBP eCLIP21.11■□□□□ 0.97
HDAC6-217ENST00000469223 ANKLE2Q86XL3 938 aa21.11■□□□□ 0.97
HDAC6-217ENST00000469223 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
HDAC6-217ENST00000469223 GPATCH8Q9UKJ3 1502 aaKnown RBP21.09■□□□□ 0.97
HDAC6-217ENST00000469223 FBXO31Q5XUX0 539 aaPredicted RBP21.09■□□□□ 0.97
HDAC6-217ENST00000469223 PLEKHH2Q8IVE3 1493 aa21.08■□□□□ 0.97
HDAC6-217ENST00000469223 SRCAPQ6ZRS2 3230 aa21.08■□□□□ 0.96
HDAC6-217ENST00000469223 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
HDAC6-217ENST00000469223 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
HDAC6-217ENST00000469223 KIAA1107Q9UPP5 1409 aa21.06■□□□□ 0.96
HDAC6-217ENST00000469223 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
HDAC6-217ENST00000469223 ROBO1Q9Y6N7 1651 aa21.02■□□□□ 0.96
HDAC6-217ENST00000469223 THEMISQ8N1K5 641 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-217ENST00000469223 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
HDAC6-217ENST00000469223 MIA2Q96PC5 1412 aa21■□□□□ 0.95
HDAC6-217ENST00000469223 FYCO1Q9BQS8 1478 aa20.97■□□□□ 0.95
HDAC6-217ENST00000469223 UBR1Q8IWV7 1749 aa20.97■□□□□ 0.95
HDAC6-217ENST00000469223 CFDP1Q9UEE9 299 aaPredicted RBP20.94■□□□□ 0.94
HDAC6-217ENST00000469223 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
HDAC6-217ENST00000469223 FAM135BQ49AJ0 1406 aa20.94■□□□□ 0.94
HDAC6-217ENST00000469223 CCNB3Q8WWL7 1395 aa20.92■□□□□ 0.94
HDAC6-217ENST00000469223 TIAM1Q13009 1591 aa20.92■□□□□ 0.94
HDAC6-217ENST00000469223 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
HDAC6-217ENST00000469223 CFAP65Q6ZU64 1925 aaKnown RBP20.91■□□□□ 0.94
HDAC6-217ENST00000469223 SCAF11Q99590 1463 aaKnown RBP20.91■□□□□ 0.94
HDAC6-217ENST00000469223 MBD5Q9P267 1494 aa20.9■□□□□ 0.94
HDAC6-217ENST00000469223 RTEL1-TNFRSF6BF6WH68 1400 aa20.9■□□□□ 0.94
HDAC6-217ENST00000469223 WASHC2CQ9Y4E1 1318 aa20.9■□□□□ 0.94
HDAC6-217ENST00000469223 KIF3BO15066 747 aa20.9■□□□□ 0.94
HDAC6-217ENST00000469223 UPF1Q92900 1129 aaKnown RBP eCLIP20.87■□□□□ 0.93
HDAC6-217ENST00000469223 ZNF644Q9H582 1327 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-217ENST00000469223 MAP3K1Q13233 1512 aa20.86■□□□□ 0.93
HDAC6-217ENST00000469223 CEP152O94986 1710 aa20.86■□□□□ 0.93
HDAC6-217ENST00000469223 ERVK-7P63135 1459 aa20.86■□□□□ 0.93
HDAC6-217ENST00000469223 ABCC3O15438 1527 aa20.85■□□□□ 0.93
HDAC6-217ENST00000469223 LRRC9Q6ZRR7 1453 aa20.84■□□□□ 0.93
HDAC6-217ENST00000469223 CCDC141Q6ZP82 1450 aa20.82■□□□□ 0.92
HDAC6-217ENST00000469223 SLIT1O75093 1534 aa20.82■□□□□ 0.92
HDAC6-217ENST00000469223 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
HDAC6-217ENST00000469223 ARHGAP23Q9P227 1491 aa20.81■□□□□ 0.92
HDAC6-217ENST00000469223 LRP6O75581 1613 aa20.8■□□□□ 0.92
HDAC6-217ENST00000469223 COL16A1Q07092 1604 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-217ENST00000469223 TMEM94Q12767 1356 aa20.8■□□□□ 0.92
HDAC6-217ENST00000469223 TRIM52Q96A61 297 aa20.79■□□□□ 0.92
HDAC6-217ENST00000469223 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
HDAC6-217ENST00000469223 JCADQ9P266 1359 aa20.77■□□□□ 0.92
HDAC6-217ENST00000469223 MROH1Q8NDA8 1641 aa20.76■□□□□ 0.91
HDAC6-217ENST00000469223 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
HDAC6-217ENST00000469223 LTKP29376 864 aa20.75■□□□□ 0.91
HDAC6-217ENST00000469223 CAMSAP2Q08AD1 1489 aa20.75■□□□□ 0.91
HDAC6-217ENST00000469223 EHBP1L1Q8N3D4 1523 aa20.74■□□□□ 0.91
HDAC6-217ENST00000469223 PIK3C2BO00750 1634 aa20.74■□□□□ 0.91
HDAC6-217ENST00000469223 EIF2AK4Q9P2K8 1649 aaKnown RBP20.74■□□□□ 0.91
HDAC6-217ENST00000469223 NWD1Q149M9 1564 aa20.73■□□□□ 0.91
HDAC6-217ENST00000469223 SHPRHQ149N8 1683 aa20.72■□□□□ 0.91
HDAC6-217ENST00000469223 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
HDAC6-217ENST00000469223 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-217ENST00000469223 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
HDAC6-217ENST00000469223 RBM33Q96EV2 1170 aaKnown RBP20.69■□□□□ 0.9
HDAC6-217ENST00000469223 ARHGEF5Q12774 1597 aa20.68■□□□□ 0.9
HDAC6-217ENST00000469223 KDM5AP29375 1690 aaKnown RBP20.68■□□□□ 0.9
HDAC6-217ENST00000469223 MEX3CQ5U5Q3 659 aaKnown RBP20.67■□□□□ 0.9
HDAC6-217ENST00000469223 ZNF772Q68DY9 489 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-217ENST00000469223 CDK12Q9NYV4 1490 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-217ENST00000469223 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
HDAC6-217ENST00000469223 MSH6P52701 1360 aa20.64■□□□□ 0.89
HDAC6-217ENST00000469223 PROSER2Q86WR7 435 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-217ENST00000469223 EID1Q9Y6B2 187 aa20.64■□□□□ 0.89
HDAC6-217ENST00000469223 FGD6Q6ZV73 1430 aa20.63■□□□□ 0.89
HDAC6-217ENST00000469223 TET3O43151 1660 aa20.63■□□□□ 0.89
HDAC6-217ENST00000469223 SPATA31A6Q5VVP1 1343 aa20.62■□□□□ 0.89
HDAC6-217ENST00000469223 TMEM2Q9UHN6 1383 aa20.61■□□□□ 0.89
HDAC6-217ENST00000469223 AHDC1Q5TGY3 1603 aaPredicted RBP20.61■□□□□ 0.89
HDAC6-217ENST00000469223 MAST1Q9Y2H9 1570 aa20.61■□□□□ 0.89
HDAC6-217ENST00000469223 KCNA6P17658 529 aa20.61■□□□□ 0.89
HDAC6-217ENST00000469223 EFCAB6Q5THR3 1501 aa20.61■□□□□ 0.89
HDAC6-217ENST00000469223 RXRBP28702 533 aa20.59■□□□□ 0.89
HDAC6-217ENST00000469223 CHD2O14647 1828 aaKnown RBP20.58■□□□□ 0.89
HDAC6-217ENST00000469223 SLAIN2Q9P270 581 aa20.58■□□□□ 0.89
HDAC6-217ENST00000469223 RGS12O14924 1447 aa20.58■□□□□ 0.88
HDAC6-217ENST00000469223 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
HDAC6-217ENST00000469223 DIP2AQ14689 1571 aa20.56■□□□□ 0.88
HDAC6-217ENST00000469223 EP400Q96L91 3159 aa20.54■□□□□ 0.88
HDAC6-217ENST00000469223 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
HDAC6-217ENST00000469223 ADGRB3O60242 1522 aa20.53■□□□□ 0.88
HDAC6-217ENST00000469223 SETBP1Q9Y6X0 1596 aa20.52■□□□□ 0.88
HDAC6-217ENST00000469223 RSPH4AQ5TD94 716 aa20.52■□□□□ 0.88
HDAC6-217ENST00000469223 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-217ENST00000469223 TSPY4P0CV99 314 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms