RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
NCSTN-212ENST00000469159 FBXO31Q5XUX0 539 aaPredicted RBP13.29□□□□□ -0.28
NCSTN-212ENST00000469159 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
NCSTN-212ENST00000469159 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
NCSTN-212ENST00000469159 KIAA1107Q9UPP5 1409 aa13.28□□□□□ -0.28
NCSTN-212ENST00000469159 DEPDC5O75140 1603 aa13.28□□□□□ -0.28
NCSTN-212ENST00000469159 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
NCSTN-212ENST00000469159 SYNMO15061 1565 aa13.25□□□□□ -0.29
NCSTN-212ENST00000469159 GPATCH8Q9UKJ3 1502 aaKnown RBP13.25□□□□□ -0.29
NCSTN-212ENST00000469159 PZPP20742 1482 aa13.25□□□□□ -0.29
NCSTN-212ENST00000469159 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
NCSTN-212ENST00000469159 UBTFP17480 764 aaKnown RBP13.24□□□□□ -0.29
NCSTN-212ENST00000469159 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
NCSTN-212ENST00000469159 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
NCSTN-212ENST00000469159 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
NCSTN-212ENST00000469159 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
NCSTN-212ENST00000469159 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
NCSTN-212ENST00000469159 MIA2Q96PC5 1412 aa13.23□□□□□ -0.29
NCSTN-212ENST00000469159 ADGBQ8N7X0 1667 aa13.22□□□□□ -0.29
NCSTN-212ENST00000469159 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
NCSTN-212ENST00000469159 CFDP1Q9UEE9 299 aaPredicted RBP13.21□□□□□ -0.29
NCSTN-212ENST00000469159 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.3
NCSTN-212ENST00000469159 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
NCSTN-212ENST00000469159 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
NCSTN-212ENST00000469159 KDM5DQ9BY66 1539 aa13.19□□□□□ -0.3
NCSTN-212ENST00000469159 WASHC2CQ9Y4E1 1318 aa13.18□□□□□ -0.3
NCSTN-212ENST00000469159 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.32e-11■□□□□ 10.2
NCSTN-212ENST00000469159 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
NCSTN-212ENST00000469159 RTEL1-TNFRSF6BF6WH68 1400 aa13.17□□□□□ -0.3
NCSTN-212ENST00000469159 KIF3BO15066 747 aa13.17□□□□□ -0.3
NCSTN-212ENST00000469159 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
NCSTN-212ENST00000469159 MBD5Q9P267 1494 aa13.15□□□□□ -0.3
NCSTN-212ENST00000469159 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.31
NCSTN-212ENST00000469159 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
NCSTN-212ENST00000469159 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
NCSTN-212ENST00000469159 ZNF644Q9H582 1327 aaPredicted RBP13.13□□□□□ -0.31
NCSTN-212ENST00000469159 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
NCSTN-212ENST00000469159 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
NCSTN-212ENST00000469159 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
NCSTN-212ENST00000469159 LTKP29376 864 aa13.09□□□□□ -0.31
NCSTN-212ENST00000469159 TXNDC2Q86VQ3 553 aa13.08□□□□□ -0.32
NCSTN-212ENST00000469159 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
NCSTN-212ENST00000469159 JCADQ9P266 1359 aa13.07□□□□□ -0.32
NCSTN-212ENST00000469159 ARHGAP23Q9P227 1491 aa13.07□□□□□ -0.32
NCSTN-212ENST00000469159 ERVK-7P63135 1459 aa13.06□□□□□ -0.32
NCSTN-212ENST00000469159 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
NCSTN-212ENST00000469159 ZNF772Q68DY9 489 aaPredicted RBP13.06□□□□□ -0.32
NCSTN-212ENST00000469159 TRIM52Q96A61 297 aa13.06□□□□□ -0.32
NCSTN-212ENST00000469159 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
NCSTN-212ENST00000469159 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
NCSTN-212ENST00000469159 SLIT1O75093 1534 aa13.05□□□□□ -0.32
NCSTN-212ENST00000469159 ABCC3O15438 1527 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 KCNA6P17658 529 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 RSPH4AQ5TD94 716 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 MTUS2Q5JR59 1369 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 CCDC141Q6ZP82 1450 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
NCSTN-212ENST00000469159 RXRBP28702 533 aa13.02□□□□□ -0.33
NCSTN-212ENST00000469159 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
NCSTN-212ENST00000469159 SPATA31A6Q5VVP1 1343 aa13.02□□□□□ -0.33
NCSTN-212ENST00000469159 PHLPP1O60346 1717 aa13.02□□□□□ -0.33
NCSTN-212ENST00000469159 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
NCSTN-212ENST00000469159 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
NCSTN-212ENST00000469159 LRP6O75581 1613 aa13.01□□□□□ -0.33
NCSTN-212ENST00000469159 MEX3CQ5U5Q3 659 aaKnown RBP13□□□□□ -0.33
NCSTN-212ENST00000469159 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
NCSTN-212ENST00000469159 CDK12Q9NYV4 1490 aaPredicted RBP12.99□□□□□ -0.33
NCSTN-212ENST00000469159 FGD6Q6ZV73 1430 aa12.98□□□□□ -0.33
NCSTN-212ENST00000469159 MSH6P52701 1360 aa12.98□□□□□ -0.33
NCSTN-212ENST00000469159 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
NCSTN-212ENST00000469159 COL16A1Q07092 1604 aaPredicted RBP12.98□□□□□ -0.33
NCSTN-212ENST00000469159 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
NCSTN-212ENST00000469159 TSPY4P0CV99 314 aa12.96□□□□□ -0.33
NCSTN-212ENST00000469159 TSPY10P0CW01 314 aa12.96□□□□□ -0.33
NCSTN-212ENST00000469159 NKTRP30414 1462 aaKnown RBP12.96□□□□□ -0.34
NCSTN-212ENST00000469159 CEP162Q5TB80 1403 aa12.96□□□□□ -0.34
NCSTN-212ENST00000469159 SLC26A8Q96RN1 970 aa12.95□□□□□ -0.34
NCSTN-212ENST00000469159 TET3O43151 1660 aa12.95□□□□□ -0.34
NCSTN-212ENST00000469159 MROH1Q8NDA8 1641 aa12.93□□□□□ -0.34
NCSTN-212ENST00000469159 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
NCSTN-212ENST00000469159 CFAP65Q6ZU64 1925 aaKnown RBP12.93□□□□□ -0.34
NCSTN-212ENST00000469159 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
NCSTN-212ENST00000469159 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
NCSTN-212ENST00000469159 ARHGEF5Q12774 1597 aa12.92□□□□□ -0.34
NCSTN-212ENST00000469159 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
NCSTN-212ENST00000469159 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
NCSTN-212ENST00000469159 PIK3C2BO00750 1634 aa12.91□□□□□ -0.34
NCSTN-212ENST00000469159 CEP152O94986 1710 aa12.91□□□□□ -0.34
NCSTN-212ENST00000469159 SHPRHQ149N8 1683 aa12.9□□□□□ -0.34
NCSTN-212ENST00000469159 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
NCSTN-212ENST00000469159 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
NCSTN-212ENST00000469159 AFF2P51816 1311 aa12.88□□□□□ -0.35
NCSTN-212ENST00000469159 RGS12O14924 1447 aa12.88□□□□□ -0.35
NCSTN-212ENST00000469159 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
NCSTN-212ENST00000469159 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
NCSTN-212ENST00000469159 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
NCSTN-212ENST00000469159 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
NCSTN-212ENST00000469159 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms