RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 PTPRGP23470 1445 aa28.83■■■□□ 2.21
LINC01140-202ENST00000467438 NBPF1Q3BBV0 1214 aa28.82■■■□□ 2.2
LINC01140-202ENST00000467438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.81■■■□□ 2.2
LINC01140-202ENST00000467438 CCDC136Q96JN2 1154 aa28.8■■■□□ 2.2
LINC01140-202ENST00000467438 SAMD9LQ8IVG5 1584 aa28.79■■■□□ 2.2
LINC01140-202ENST00000467438 FAM135AQ9P2D6 1515 aa28.78■■■□□ 2.2
LINC01140-202ENST00000467438 MYBBP1AQ9BQG0 1328 aaKnown RBP28.77■■■□□ 2.2
LINC01140-202ENST00000467438 LRPPRCP42704 1394 aaKnown RBP28.76■■■□□ 2.19
LINC01140-202ENST00000467438 CDC42BPBQ9Y5S2 1711 aa28.74■■■□□ 2.19
LINC01140-202ENST00000467438 ARHGEF5Q12774 1597 aa28.74■■■□□ 2.19
LINC01140-202ENST00000467438 CCDC141Q6ZP82 1450 aa28.74■■■□□ 2.19
LINC01140-202ENST00000467438 BRD4O60885 1362 aaPredicted RBP28.71■■■□□ 2.19
LINC01140-202ENST00000467438 RALBP1Q15311 655 aa28.71■■■□□ 2.19
LINC01140-202ENST00000467438 CCDC144AA2RUR9 1427 aa28.7■■■□□ 2.19
LINC01140-202ENST00000467438 PRAG1Q86YV5 1406 aa28.7■■■□□ 2.19
LINC01140-202ENST00000467438 PLA2R1Q13018 1463 aa28.69■■■□□ 2.18
LINC01140-202ENST00000467438 E9PCH4 1651 aa28.69■■■□□ 2.18
LINC01140-202ENST00000467438 SYCP2Q9BX26 1530 aa28.68■■■□□ 2.18
LINC01140-202ENST00000467438 BCL11AQ9H165 835 aa28.67■■■□□ 2.18
LINC01140-202ENST00000467438 CC2D1BQ5T0F9 858 aaKnown RBP28.65■■■□□ 2.18
LINC01140-202ENST00000467438 PREX2Q70Z35 1606 aa28.65■■■□□ 2.18
LINC01140-202ENST00000467438 TRPM1Q7Z4N2 1603 aa28.65■■■□□ 2.18
LINC01140-202ENST00000467438 PER1O15534 1290 aaPredicted RBP28.64■■■□□ 2.18
LINC01140-202ENST00000467438 PAK3O75914 559 aaPredicted RBP28.64■■■□□ 2.18
LINC01140-202ENST00000467438 A2MP01023 1474 aa28.63■■■□□ 2.17
LINC01140-202ENST00000467438 DISP3Q9P2K9 1392 aa28.62■■■□□ 2.17
LINC01140-202ENST00000467438 TTC37Q6PGP7 1564 aa28.62■■■□□ 2.17
LINC01140-202ENST00000467438 EXOC6Q8TAG9 804 aa28.61■■■□□ 2.17
LINC01140-202ENST00000467438 ARHGAP5Q13017 1502 aa28.61■■■□□ 2.17
LINC01140-202ENST00000467438 KTN1Q86UP2 1357 aaKnown RBP28.61■■■□□ 2.17
LINC01140-202ENST00000467438 PARD3Q8TEW0 1356 aa28.61■■■□□ 2.17
LINC01140-202ENST00000467438 CDCA7LQ96GN5 454 aa28.61■■■□□ 2.17
LINC01140-202ENST00000467438 NLRP13Q86W25 1043 aa28.6■■■□□ 2.17
LINC01140-202ENST00000467438 PLEKHH2Q8IVE3 1493 aa28.6■■■□□ 2.17
LINC01140-202ENST00000467438 RRP1P56182 461 aaKnown RBP28.6■■■□□ 2.17
LINC01140-202ENST00000467438 TESK2Q96S53 571 aa28.59■■■□□ 2.17
LINC01140-202ENST00000467438 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
LINC01140-202ENST00000467438 RCAN3Q9UKA8 241 aa28.56■■■□□ 2.16
LINC01140-202ENST00000467438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.55■■■□□ 2.16
LINC01140-202ENST00000467438 PANK3Q9H999 370 aa28.55■■■□□ 2.16
LINC01140-202ENST00000467438 NOP58Q9Y2X3 529 aaKnown RBP28.55■■■□□ 2.16
LINC01140-202ENST00000467438 GPRASP1Q5JY77 1395 aa28.51■■■□□ 2.15
LINC01140-202ENST00000467438 UNC13BO14795 1591 aa28.51■■■□□ 2.15
LINC01140-202ENST00000467438 COL17A1Q9UMD9 1497 aaPredicted RBP28.51■■■□□ 2.15
LINC01140-202ENST00000467438 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
LINC01140-202ENST00000467438 NBR1Q14596 966 aa28.5■■■□□ 2.15
LINC01140-202ENST00000467438 PLIN1O60240 522 aa28.49■■■□□ 2.15
LINC01140-202ENST00000467438 MYO5CQ9NQX4 1742 aa28.47■■■□□ 2.15
LINC01140-202ENST00000467438 PRDM15P57071 1507 aaPredicted RBP28.47■■■□□ 2.15
LINC01140-202ENST00000467438 ERBINQ96RT1 1412 aa28.46■■■□□ 2.15
LINC01140-202ENST00000467438 MAST1Q9Y2H9 1570 aa28.44■■■□□ 2.14
LINC01140-202ENST00000467438 CHD1O14646 1710 aa28.43■■■□□ 2.14
LINC01140-202ENST00000467438 IQGAP3Q86VI3 1631 aa28.42■■■□□ 2.14
LINC01140-202ENST00000467438 TMF1P82094 1093 aa28.41■■■□□ 2.14
LINC01140-202ENST00000467438 SKAP1Q86WV1 359 aa28.41■■■□□ 2.14
LINC01140-202ENST00000467438 ANP32AP39687 249 aaKnown RBP28.4■■■□□ 2.14
LINC01140-202ENST00000467438 IPO9Q96P70 1041 aaKnown RBP28.4■■■□□ 2.14
LINC01140-202ENST00000467438 PDE3BQ13370 1112 aa28.38■■■□□ 2.13
LINC01140-202ENST00000467438 NPM2Q86SE8 214 aaKnown RBP28.37■■■□□ 2.13
LINC01140-202ENST00000467438 PLXNC1O60486 1568 aa28.37■■■□□ 2.13
LINC01140-202ENST00000467438 ADAMTS8Q9UP79 889 aa28.35■■■□□ 2.13
LINC01140-202ENST00000467438 DUOX2Q9NRD8 1548 aa28.35■■■□□ 2.13
LINC01140-202ENST00000467438 LAMC1P11047 1609 aa28.34■■■□□ 2.13
LINC01140-202ENST00000467438 TRAPPC8Q9Y2L5 1435 aa28.33■■■□□ 2.13
LINC01140-202ENST00000467438 BLMP54132 1417 aaPredicted RBP28.33■■■□□ 2.13
LINC01140-202ENST00000467438 ABCC2Q92887 1545 aa28.32■■■□□ 2.12
LINC01140-202ENST00000467438 MAGI2Q86UL8 1455 aa28.32■■■□□ 2.12
LINC01140-202ENST00000467438 WASHC2CQ9Y4E1 1318 aa28.32■■■□□ 2.12
LINC01140-202ENST00000467438 DEKP35659 375 aaKnown RBP28.32■■■□□ 2.12
LINC01140-202ENST00000467438 CRBNQ96SW2 442 aa28.31■■■□□ 2.12
LINC01140-202ENST00000467438 EIF2AK4Q9P2K8 1649 aaKnown RBP28.3■■■□□ 2.12
LINC01140-202ENST00000467438 C20orf194Q5TEA3 1177 aa28.3■■■□□ 2.12
LINC01140-202ENST00000467438 AFAP1Q8N556 730 aa28.3■■■□□ 2.12
LINC01140-202ENST00000467438 ZBTB47Q9UFB7 747 aaPredicted RBP28.3■■■□□ 2.12
LINC01140-202ENST00000467438 ATP10AO60312 1499 aa28.29■■■□□ 2.12
LINC01140-202ENST00000467438 SHROOM2Q13796 1616 aa28.28■■■□□ 2.12
LINC01140-202ENST00000467438 PLCH2O75038 1416 aa28.28■■■□□ 2.12
LINC01140-202ENST00000467438 PDE4AP27815 886 aa28.27■■■□□ 2.12
LINC01140-202ENST00000467438 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
LINC01140-202ENST00000467438 EFCAB2Q5VUJ9 269 aa28.26■■■□□ 2.12
LINC01140-202ENST00000467438 PPP2R1AP30153 589 aa28.25■■■□□ 2.11
LINC01140-202ENST00000467438 TCERG1O14776 1098 aaKnown RBP28.24■■■□□ 2.11
LINC01140-202ENST00000467438 RNF17Q9BXT8 1623 aaKnown RBP28.23■■■□□ 2.11
LINC01140-202ENST00000467438 KNSTRNQ9Y448 316 aa28.23■■■□□ 2.11
LINC01140-202ENST00000467438 PLEKHH1Q9ULM0 1364 aa28.22■■■□□ 2.11
LINC01140-202ENST00000467438 AMER1Q5JTC6 1135 aaPredicted RBP28.21■■■□□ 2.11
LINC01140-202ENST00000467438 ZMYM4Q5VZL5 1548 aa28.2■■■□□ 2.1
LINC01140-202ENST00000467438 MADDQ8WXG6 1647 aa28.2■■■□□ 2.1
LINC01140-202ENST00000467438 BACH2Q9BYV9 841 aa28.19■■■□□ 2.1
LINC01140-202ENST00000467438 SPAG9O60271 1321 aaKnown RBP28.19■■■□□ 2.1
LINC01140-202ENST00000467438 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
LINC01140-202ENST00000467438 ABCC1P33527 1531 aa28.19■■■□□ 2.1
LINC01140-202ENST00000467438 WDR43Q15061 677 aaKnown RBP eCLIP28.16■■■□□ 2.1
LINC01140-202ENST00000467438 CCDC146Q8IYE0 955 aa28.15■■■□□ 2.1
LINC01140-202ENST00000467438 DUSP27Q5VZP5 1158 aa28.14■■■□□ 2.09
LINC01140-202ENST00000467438 INSRP06213 1382 aa28.13■■■□□ 2.09
LINC01140-202ENST00000467438 IQGAP1P46940 1657 aa28.13■■■□□ 2.09
LINC01140-202ENST00000467438 MYT1LQ9UL68 1186 aa28.12■■■□□ 2.09
LINC01140-202ENST00000467438 CLTCL1P53675 1640 aa28.11■■■□□ 2.09
LINC01140-202ENST00000467438 SCAF11Q99590 1463 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms