RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 MLH3Q9UHC1 1453 aa17.76■□□□□ 0.43
HDLBP-231ENST00000467435 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
HDLBP-231ENST00000467435 FRMPD1Q5SYB0 1578 aa17.75■□□□□ 0.43
HDLBP-231ENST00000467435 PKD2Q13563 968 aa17.74■□□□□ 0.43
HDLBP-231ENST00000467435 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
HDLBP-231ENST00000467435 PRDM15P57071 1507 aaPredicted RBP17.73■□□□□ 0.43
HDLBP-231ENST00000467435 MROH1Q8NDA8 1641 aa17.73■□□□□ 0.43
HDLBP-231ENST00000467435 RNF17Q9BXT8 1623 aaKnown RBP17.73■□□□□ 0.43
HDLBP-231ENST00000467435 BCORL1Q5H9F3 1711 aa17.73■□□□□ 0.43
HDLBP-231ENST00000467435 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
HDLBP-231ENST00000467435 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
HDLBP-231ENST00000467435 TET3O43151 1660 aa17.72■□□□□ 0.43
HDLBP-231ENST00000467435 DIP2CQ9Y2E4 1556 aa17.72■□□□□ 0.43
HDLBP-231ENST00000467435 E9PCH4 1651 aa17.71■□□□□ 0.43
HDLBP-231ENST00000467435 A2MP01023 1474 aa17.71■□□□□ 0.43
HDLBP-231ENST00000467435 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
HDLBP-231ENST00000467435 DHX29Q7Z478 1369 aaKnown RBP17.7■□□□□ 0.42
HDLBP-231ENST00000467435 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-231ENST00000467435 ZMYM4Q5VZL5 1548 aa17.7■□□□□ 0.42
HDLBP-231ENST00000467435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.426e-10■■■□□ 14.9
HDLBP-231ENST00000467435 CEP152O94986 1710 aa17.68■□□□□ 0.42
HDLBP-231ENST00000467435 SPHKAPQ2M3C7 1700 aa17.67■□□□□ 0.42
HDLBP-231ENST00000467435 KANK1Q14678 1352 aa17.64■□□□□ 0.41
HDLBP-231ENST00000467435 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
HDLBP-231ENST00000467435 ATP10AO60312 1499 aa17.62■□□□□ 0.41
HDLBP-231ENST00000467435 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
HDLBP-231ENST00000467435 KIF3BO15066 747 aa17.61■□□□□ 0.41
HDLBP-231ENST00000467435 L3MBTL2Q969R5 705 aa17.61■□□□□ 0.41
HDLBP-231ENST00000467435 CCDC144AA2RUR9 1427 aa17.61■□□□□ 0.41
HDLBP-231ENST00000467435 TRPM2O94759 1503 aa17.61■□□□□ 0.41
HDLBP-231ENST00000467435 PLA2R1Q13018 1463 aa17.6■□□□□ 0.41
HDLBP-231ENST00000467435 LMTK2Q8IWU2 1503 aa17.6■□□□□ 0.41
HDLBP-231ENST00000467435 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
HDLBP-231ENST00000467435 YEATS2Q9ULM3 1422 aa17.58■□□□□ 0.41
HDLBP-231ENST00000467435 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
HDLBP-231ENST00000467435 CAMSAP1Q5T5Y3 1602 aa17.57■□□□□ 0.4
HDLBP-231ENST00000467435 REREQ9P2R6 1566 aa17.57■□□□□ 0.4
HDLBP-231ENST00000467435 CLTCL1P53675 1640 aa17.56■□□□□ 0.4
HDLBP-231ENST00000467435 ARHGEF40Q8TER5 1519 aa17.56■□□□□ 0.4
HDLBP-231ENST00000467435 ABCC3O15438 1527 aa17.54■□□□□ 0.4
HDLBP-231ENST00000467435 PTPRTO14522 1441 aa17.53■□□□□ 0.4
HDLBP-231ENST00000467435 UHRF1BP1Q6BDS2 1440 aa17.51■□□□□ 0.39
HDLBP-231ENST00000467435 KIF1BO60333 1816 aa17.51■□□□□ 0.39
HDLBP-231ENST00000467435 SIGLEC1Q9BZZ2 1709 aa17.5■□□□□ 0.39
HDLBP-231ENST00000467435 NBPF8Q3BBV2 869 aa17.49■□□□□ 0.39
HDLBP-231ENST00000467435 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-231ENST00000467435 AGLP35573 1532 aa17.48■□□□□ 0.39
HDLBP-231ENST00000467435 RALGAPBQ86X10 1494 aa17.48■□□□□ 0.39
HDLBP-231ENST00000467435 NEURL4Q96JN8 1562 aa17.48■□□□□ 0.39
HDLBP-231ENST00000467435 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
HDLBP-231ENST00000467435 MROH2AA6NES4 1674 aa17.47■□□□□ 0.39
HDLBP-231ENST00000467435 POLR1AO95602 1720 aaPredicted RBP17.47■□□□□ 0.39
HDLBP-231ENST00000467435 GGT6Q6P531 493 aa17.46■□□□□ 0.39
HDLBP-231ENST00000467435 UGGT1Q9NYU2 1555 aa17.45■□□□□ 0.38
HDLBP-231ENST00000467435 SPATA31E1Q6ZUB1 1445 aa17.45■□□□□ 0.38
HDLBP-231ENST00000467435 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
HDLBP-231ENST00000467435 NPATQ14207 1427 aa17.44■□□□□ 0.38
HDLBP-231ENST00000467435 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
HDLBP-231ENST00000467435 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
HDLBP-231ENST00000467435 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
HDLBP-231ENST00000467435 PRAG1Q86YV5 1406 aa17.42■□□□□ 0.38
HDLBP-231ENST00000467435 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
HDLBP-231ENST00000467435 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
HDLBP-231ENST00000467435 LAMC1P11047 1609 aa17.41■□□□□ 0.38
HDLBP-231ENST00000467435 DCAF11Q8TEB1 546 aa17.41■□□□□ 0.38
HDLBP-231ENST00000467435 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
HDLBP-231ENST00000467435 WASHC2CQ9Y4E1 1318 aa17.41■□□□□ 0.38
HDLBP-231ENST00000467435 PIK3C2BO00750 1634 aa17.4■□□□□ 0.38
HDLBP-231ENST00000467435 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
HDLBP-231ENST00000467435 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
HDLBP-231ENST00000467435 ADGRB3O60242 1522 aa17.4■□□□□ 0.38
HDLBP-231ENST00000467435 SYNMO15061 1565 aa17.4■□□□□ 0.38
HDLBP-231ENST00000467435 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
HDLBP-231ENST00000467435 RGL3Q3MIN7 710 aa17.39■□□□□ 0.37
HDLBP-231ENST00000467435 ARHGAP31Q2M1Z3 1444 aa17.38■□□□□ 0.37
HDLBP-231ENST00000467435 KDM2AQ9Y2K7 1162 aa17.38■□□□□ 0.37
HDLBP-231ENST00000467435 NOS1P29475 1434 aa17.36■□□□□ 0.37
HDLBP-231ENST00000467435 PPLO60437 1756 aa17.35■□□□□ 0.37
HDLBP-231ENST00000467435 USP47Q96K76 1375 aa17.34■□□□□ 0.37
HDLBP-231ENST00000467435 KIAA1210Q9ULL0 1709 aa17.34■□□□□ 0.37
HDLBP-231ENST00000467435 MYOM2P54296 1465 aa17.33■□□□□ 0.37
HDLBP-231ENST00000467435 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
HDLBP-231ENST00000467435 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
HDLBP-231ENST00000467435 MYO5BQ9ULV0 1848 aa17.31■□□□□ 0.36
HDLBP-231ENST00000467435 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
HDLBP-231ENST00000467435 GPRASP1Q5JY77 1395 aa17.29■□□□□ 0.36
HDLBP-231ENST00000467435 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
HDLBP-231ENST00000467435 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
HDLBP-231ENST00000467435 MIER1Q8N108 512 aa17.28■□□□□ 0.36
HDLBP-231ENST00000467435 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
HDLBP-231ENST00000467435 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
HDLBP-231ENST00000467435 SPATA31D1Q6ZQQ2 1576 aa17.27■□□□□ 0.35
HDLBP-231ENST00000467435 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
HDLBP-231ENST00000467435 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
HDLBP-231ENST00000467435 WASHC2AQ641Q2 1341 aa17.25■□□□□ 0.35
HDLBP-231ENST00000467435 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
HDLBP-231ENST00000467435 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
HDLBP-231ENST00000467435 NEXMIFQ5QGS0 1516 aa17.24■□□□□ 0.35
HDLBP-231ENST00000467435 MLECQ14165 292 aa17.23■□□□□ 0.35
HDLBP-231ENST00000467435 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms