RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
PRPF3-202ENST00000467329 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
PRPF3-202ENST00000467329 FRMPD1Q5SYB0 1578 aa13.67□□□□□ -0.22
PRPF3-202ENST00000467329 RNF17Q9BXT8 1623 aaKnown RBP13.67□□□□□ -0.22
PRPF3-202ENST00000467329 A2MP01023 1474 aa13.66□□□□□ -0.22
PRPF3-202ENST00000467329 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
PRPF3-202ENST00000467329 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
PRPF3-202ENST00000467329 NEUROD1Q13562 356 aa13.65□□□□□ -0.22
PRPF3-202ENST00000467329 PKD2Q13563 968 aa13.65□□□□□ -0.22
PRPF3-202ENST00000467329 DIP2CQ9Y2E4 1556 aa13.64□□□□□ -0.23
PRPF3-202ENST00000467329 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
PRPF3-202ENST00000467329 ATP10AO60312 1499 aa13.63□□□□□ -0.23
PRPF3-202ENST00000467329 TET3O43151 1660 aa13.63□□□□□ -0.23
PRPF3-202ENST00000467329 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
PRPF3-202ENST00000467329 LMTK2Q8IWU2 1503 aa13.62□□□□□ -0.23
PRPF3-202ENST00000467329 KANK1Q14678 1352 aa13.61□□□□□ -0.23
PRPF3-202ENST00000467329 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
PRPF3-202ENST00000467329 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
PRPF3-202ENST00000467329 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
PRPF3-202ENST00000467329 FOXD1Q16676 465 aa13.6□□□□□ -0.23
PRPF3-202ENST00000467329 MYT1LQ9UL68 1186 aa13.59□□□□□ -0.23
PRPF3-202ENST00000467329 E9PCH4 1651 aa13.57□□□□□ -0.24
PRPF3-202ENST00000467329 RAPGEF3O95398 923 aa13.57□□□□□ -0.24
PRPF3-202ENST00000467329 PLA2R1Q13018 1463 aa13.56□□□□□ -0.24
PRPF3-202ENST00000467329 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
PRPF3-202ENST00000467329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.244e-7■■□□□ 14
PRPF3-202ENST00000467329 TRPM2O94759 1503 aa13.55□□□□□ -0.24
PRPF3-202ENST00000467329 PTPRTO14522 1441 aa13.55□□□□□ -0.24
PRPF3-202ENST00000467329 KIF3BO15066 747 aa13.55□□□□□ -0.24
PRPF3-202ENST00000467329 ZC3H13Q5T200 1668 aaKnown RBP13.55□□□□□ -0.24
PRPF3-202ENST00000467329 AGLP35573 1532 aa13.55□□□□□ -0.24
PRPF3-202ENST00000467329 SPHKAPQ2M3C7 1700 aa13.54□□□□□ -0.24
PRPF3-202ENST00000467329 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
PRPF3-202ENST00000467329 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
PRPF3-202ENST00000467329 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
PRPF3-202ENST00000467329 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
PRPF3-202ENST00000467329 L3MBTL2Q969R5 705 aa13.53□□□□□ -0.24
PRPF3-202ENST00000467329 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
PRPF3-202ENST00000467329 ABCC3O15438 1527 aa13.52□□□□□ -0.25
PRPF3-202ENST00000467329 CEP152O94986 1710 aa13.52□□□□□ -0.25
PRPF3-202ENST00000467329 UHRF1BP1Q6BDS2 1440 aa13.51□□□□□ -0.25
PRPF3-202ENST00000467329 COL17A1Q9UMD9 1497 aaPredicted RBP13.49□□□□□ -0.25
PRPF3-202ENST00000467329 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
PRPF3-202ENST00000467329 ARHGAP31Q2M1Z3 1444 aa13.48□□□□□ -0.25
PRPF3-202ENST00000467329 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
PRPF3-202ENST00000467329 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
PRPF3-202ENST00000467329 SPATA31E1Q6ZUB1 1445 aa13.46□□□□□ -0.25
PRPF3-202ENST00000467329 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
PRPF3-202ENST00000467329 RALGAPBQ86X10 1494 aa13.45□□□□□ -0.26
PRPF3-202ENST00000467329 NPATQ14207 1427 aa13.44□□□□□ -0.26
PRPF3-202ENST00000467329 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
PRPF3-202ENST00000467329 NOS1P29475 1434 aa13.42□□□□□ -0.26
PRPF3-202ENST00000467329 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
PRPF3-202ENST00000467329 GGT6Q6P531 493 aa13.41□□□□□ -0.26
PRPF3-202ENST00000467329 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
PRPF3-202ENST00000467329 DIEXFQ68CQ4 756 aaKnown RBP13.41□□□□□ -0.26
PRPF3-202ENST00000467329 KIF1BO60333 1816 aa13.4□□□□□ -0.26
PRPF3-202ENST00000467329 LAMC1P11047 1609 aa13.4□□□□□ -0.26
PRPF3-202ENST00000467329 PRAG1Q86YV5 1406 aa13.4□□□□□ -0.26
PRPF3-202ENST00000467329 PIK3C2BO00750 1634 aa13.4□□□□□ -0.26
PRPF3-202ENST00000467329 SIGLEC1Q9BZZ2 1709 aa13.4□□□□□ -0.26
PRPF3-202ENST00000467329 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
PRPF3-202ENST00000467329 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
PRPF3-202ENST00000467329 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRPF3-202ENST00000467329 SYNMO15061 1565 aa13.37□□□□□ -0.27
PRPF3-202ENST00000467329 MYOM2P54296 1465 aa13.37□□□□□ -0.27
PRPF3-202ENST00000467329 IFT172Q9UG01 1749 aa13.37□□□□□ -0.27
PRPF3-202ENST00000467329 PREX1Q8TCU6 1659 aa13.37□□□□□ -0.27
PRPF3-202ENST00000467329 MADDQ8WXG6 1647 aa13.36□□□□□ -0.27
PRPF3-202ENST00000467329 DCAF11Q8TEB1 546 aa13.36□□□□□ -0.27
PRPF3-202ENST00000467329 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
PRPF3-202ENST00000467329 UGGT1Q9NYU2 1555 aa13.35□□□□□ -0.27
PRPF3-202ENST00000467329 KIAA1210Q9ULL0 1709 aa13.35□□□□□ -0.27
PRPF3-202ENST00000467329 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
PRPF3-202ENST00000467329 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
PRPF3-202ENST00000467329 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
PRPF3-202ENST00000467329 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-202ENST00000467329 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
PRPF3-202ENST00000467329 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
PRPF3-202ENST00000467329 SPATA31D1Q6ZQQ2 1576 aa13.33□□□□□ -0.28
PRPF3-202ENST00000467329 NRXN1Q9ULB1 1477 aa13.32□□□□□ -0.28
PRPF3-202ENST00000467329 RPGRIP1LQ68CZ1 1315 aa13.32□□□□□ -0.28
PRPF3-202ENST00000467329 RGL3Q3MIN7 710 aa13.31□□□□□ -0.28
PRPF3-202ENST00000467329 SLC52A1Q9NWF4 448 aa13.31□□□□□ -0.28
PRPF3-202ENST00000467329 USP47Q96K76 1375 aa13.31□□□□□ -0.28
PRPF3-202ENST00000467329 PPLO60437 1756 aa13.31□□□□□ -0.28
PRPF3-202ENST00000467329 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
PRPF3-202ENST00000467329 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
PRPF3-202ENST00000467329 ZNF326Q5BKZ1 582 aaKnown RBP13.29□□□□□ -0.28
PRPF3-202ENST00000467329 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
PRPF3-202ENST00000467329 CARD11Q9BXL7 1154 aa13.27□□□□□ -0.29
PRPF3-202ENST00000467329 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.29
PRPF3-202ENST00000467329 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
PRPF3-202ENST00000467329 IQGAP1P46940 1657 aa13.26□□□□□ -0.29
PRPF3-202ENST00000467329 CFAP65Q6ZU64 1925 aaKnown RBP13.26□□□□□ -0.29
PRPF3-202ENST00000467329 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
PRPF3-202ENST00000467329 SETBP1Q9Y6X0 1596 aa13.25□□□□□ -0.29
PRPF3-202ENST00000467329 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
PRPF3-202ENST00000467329 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
PRPF3-202ENST00000467329 ESF1Q9H501 851 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms