RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 DIP2CQ9Y2E4 1556 aa16.1■□□□□ 0.17
MUC1-216ENST00000467134 MPHOSPH9Q99550 1183 aa16.1■□□□□ 0.17
MUC1-216ENST00000467134 DHX29Q7Z478 1369 aaKnown RBP16.1■□□□□ 0.17
MUC1-216ENST00000467134 TRIM52Q96A61 297 aa16.09■□□□□ 0.17
MUC1-216ENST00000467134 A2MP01023 1474 aa16.09■□□□□ 0.17
MUC1-216ENST00000467134 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.16
MUC1-216ENST00000467134 TET3O43151 1660 aa16.08■□□□□ 0.16
MUC1-216ENST00000467134 NUP155O75694 1391 aa16.06■□□□□ 0.16
MUC1-216ENST00000467134 ANKRD30BQ9BXX2 1392 aa16.05■□□□□ 0.16
MUC1-216ENST00000467134 LMTK2Q8IWU2 1503 aa16.04■□□□□ 0.16
MUC1-216ENST00000467134 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
MUC1-216ENST00000467134 ATP10AO60312 1499 aa16.03■□□□□ 0.16
MUC1-216ENST00000467134 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
MUC1-216ENST00000467134 ZC3H13Q5T200 1668 aaKnown RBP16.03■□□□□ 0.16
MUC1-216ENST00000467134 ARHGEF40Q8TER5 1519 aa16.03■□□□□ 0.16
MUC1-216ENST00000467134 AGLP35573 1532 aa16.02■□□□□ 0.15
MUC1-216ENST00000467134 KANK1Q14678 1352 aa16■□□□□ 0.15
MUC1-216ENST00000467134 E9PCH4 1651 aa15.99■□□□□ 0.15
MUC1-216ENST00000467134 EFCAB6Q5THR3 1501 aa15.98■□□□□ 0.15
MUC1-216ENST00000467134 SPHKAPQ2M3C7 1700 aa15.97■□□□□ 0.15
MUC1-216ENST00000467134 RAPGEF3O95398 923 aa15.97■□□□□ 0.15
MUC1-216ENST00000467134 PKD2Q13563 968 aa15.96■□□□□ 0.15
MUC1-216ENST00000467134 CEP152O94986 1710 aa15.96■□□□□ 0.15
MUC1-216ENST00000467134 YEATS2Q9ULM3 1422 aa15.95■□□□□ 0.14
MUC1-216ENST00000467134 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
MUC1-216ENST00000467134 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
MUC1-216ENST00000467134 TRPM2O94759 1503 aa15.94■□□□□ 0.14
MUC1-216ENST00000467134 COL17A1Q9UMD9 1497 aaPredicted RBP15.94■□□□□ 0.14
MUC1-216ENST00000467134 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
MUC1-216ENST00000467134 MYT1LQ9UL68 1186 aa15.93■□□□□ 0.14
MUC1-216ENST00000467134 KIF3BO15066 747 aa15.92■□□□□ 0.14
MUC1-216ENST00000467134 CAMSAP1Q5T5Y3 1602 aa15.92■□□□□ 0.14
MUC1-216ENST00000467134 ABCC3O15438 1527 aa15.92■□□□□ 0.14
MUC1-216ENST00000467134 PTPRTO14522 1441 aa15.92■□□□□ 0.14
MUC1-216ENST00000467134 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
MUC1-216ENST00000467134 ARHGAP31Q2M1Z3 1444 aa15.89■□□□□ 0.13
MUC1-216ENST00000467134 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
MUC1-216ENST00000467134 CCDC144AA2RUR9 1427 aa15.87■□□□□ 0.13
MUC1-216ENST00000467134 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
MUC1-216ENST00000467134 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
MUC1-216ENST00000467134 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
MUC1-216ENST00000467134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.13
MUC1-216ENST00000467134 SIGLEC1Q9BZZ2 1709 aa15.85■□□□□ 0.13
MUC1-216ENST00000467134 FOXD1Q16676 465 aa15.85■□□□□ 0.13
MUC1-216ENST00000467134 CLTCL1P53675 1640 aa15.83■□□□□ 0.13
MUC1-216ENST00000467134 KIF1BO60333 1816 aa15.83■□□□□ 0.12
MUC1-216ENST00000467134 UHRF1BP1Q6BDS2 1440 aa15.83■□□□□ 0.12
MUC1-216ENST00000467134 CNTLNQ9NXG0 1405 aa15.83■□□□□ 0.12
MUC1-216ENST00000467134 PIK3C2BO00750 1634 aa15.82■□□□□ 0.12
MUC1-216ENST00000467134 MROH2AA6NES4 1674 aa15.81■□□□□ 0.12
MUC1-216ENST00000467134 NPATQ14207 1427 aa15.81■□□□□ 0.12
MUC1-216ENST00000467134 NOS1P29475 1434 aa15.8■□□□□ 0.12
MUC1-216ENST00000467134 PREX1Q8TCU6 1659 aa15.79■□□□□ 0.12
MUC1-216ENST00000467134 SPATA31E1Q6ZUB1 1445 aa15.79■□□□□ 0.12
MUC1-216ENST00000467134 IFT172Q9UG01 1749 aa15.78■□□□□ 0.12
MUC1-216ENST00000467134 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
MUC1-216ENST00000467134 STAC3Q96MF2 364 aa15.78■□□□□ 0.12
MUC1-216ENST00000467134 CLTCQ00610 1675 aaKnown RBP15.77■□□□□ 0.12
MUC1-216ENST00000467134 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
MUC1-216ENST00000467134 LAMC1P11047 1609 aa15.76■□□□□ 0.11
MUC1-216ENST00000467134 WASHC2CQ9Y4E1 1318 aa15.76■□□□□ 0.11
MUC1-216ENST00000467134 ADGRB3O60242 1522 aa15.76■□□□□ 0.11
MUC1-216ENST00000467134 SYNMO15061 1565 aa15.75■□□□□ 0.11
MUC1-216ENST00000467134 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
MUC1-216ENST00000467134 GGT6Q6P531 493 aa15.75■□□□□ 0.11
MUC1-216ENST00000467134 RALGAPBQ86X10 1494 aa15.74■□□□□ 0.11
MUC1-216ENST00000467134 SPATA31D1Q6ZQQ2 1576 aa15.74■□□□□ 0.11
MUC1-216ENST00000467134 KIAA1210Q9ULL0 1709 aa15.74■□□□□ 0.11
MUC1-216ENST00000467134 TRPM1Q7Z4N2 1603 aa15.73■□□□□ 0.11
MUC1-216ENST00000467134 MYOM2P54296 1465 aa15.71■□□□□ 0.11
MUC1-216ENST00000467134 KDM5AP29375 1690 aaKnown RBP15.71■□□□□ 0.11
MUC1-216ENST00000467134 MADDQ8WXG6 1647 aa15.71■□□□□ 0.11
MUC1-216ENST00000467134 ERVK-7P63135 1459 aa15.71■□□□□ 0.1
MUC1-216ENST00000467134 PPLO60437 1756 aa15.7■□□□□ 0.1
MUC1-216ENST00000467134 PRAG1Q86YV5 1406 aa15.69■□□□□ 0.1
MUC1-216ENST00000467134 POLR1AO95602 1720 aaPredicted RBP15.69■□□□□ 0.1
MUC1-216ENST00000467134 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
MUC1-216ENST00000467134 FER1L4A9Z1Z3 1794 aa15.68■□□□□ 0.1
MUC1-216ENST00000467134 UGGT1Q9NYU2 1555 aa15.68■□□□□ 0.1
MUC1-216ENST00000467134 TMEM131LA2VDJ0 1609 aa15.66■□□□□ 0.1
MUC1-216ENST00000467134 SLC52A1Q9NWF4 448 aa15.66■□□□□ 0.1
MUC1-216ENST00000467134 NRXN1Q9ULB1 1477 aa15.65■□□□□ 0.1
MUC1-216ENST00000467134 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
MUC1-216ENST00000467134 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
MUC1-216ENST00000467134 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
MUC1-216ENST00000467134 MYO5BQ9ULV0 1848 aa15.61■□□□□ 0.09
MUC1-216ENST00000467134 ZFYVE9O95405 1425 aa15.61■□□□□ 0.09
MUC1-216ENST00000467134 C3P01024 1663 aa15.61■□□□□ 0.09
MUC1-216ENST00000467134 DCAF11Q8TEB1 546 aa15.61■□□□□ 0.09
MUC1-216ENST00000467134 NEXMIFQ5QGS0 1516 aa15.6■□□□□ 0.09
MUC1-216ENST00000467134 IQGAP1P46940 1657 aa15.6■□□□□ 0.09
MUC1-216ENST00000467134 ADAMTSL3P82987 1691 aa15.6■□□□□ 0.09
MUC1-216ENST00000467134 ZMYM3Q14202 1370 aa15.6■□□□□ 0.09
MUC1-216ENST00000467134 SETBP1Q9Y6X0 1596 aa15.59■□□□□ 0.09
MUC1-216ENST00000467134 EIF4G2P78344 907 aaKnown RBP eCLIP15.59■□□□□ 0.09
MUC1-216ENST00000467134 ESF1Q9H501 851 aaKnown RBP15.58■□□□□ 0.08
MUC1-216ENST00000467134 RGL3Q3MIN7 710 aa15.56■□□□□ 0.08
MUC1-216ENST00000467134 ARID4BQ4LE39 1312 aaPredicted RBP15.56■□□□□ 0.08
MUC1-216ENST00000467134 NLRP1Q9C000 1473 aa15.56■□□□□ 0.08
MUC1-216ENST00000467134 UBR1Q8IWV7 1749 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms