RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 KDM5DQ9BY66 1539 aa24.63■■□□□ 1.53
COL16A1-207ENST00000466829 FBXO31Q5XUX0 539 aaPredicted RBP24.63■■□□□ 1.53
COL16A1-207ENST00000466829 KIF15Q9NS87 1388 aa24.63■■□□□ 1.53
COL16A1-207ENST00000466829 DAPK1P53355 1430 aa24.62■■□□□ 1.53
COL16A1-207ENST00000466829 TCOF1Q13428 1488 aaKnown RBP24.61■■□□□ 1.53
COL16A1-207ENST00000466829 DUOX2Q9NRD8 1548 aa24.6■■□□□ 1.53
COL16A1-207ENST00000466829 SHANK2Q9UPX8 1470 aa24.59■■□□□ 1.53
COL16A1-207ENST00000466829 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
COL16A1-207ENST00000466829 FBXO41Q8TF61 875 aa24.59■■□□□ 1.53
COL16A1-207ENST00000466829 TNRQ92752 1358 aa24.58■■□□□ 1.53
COL16A1-207ENST00000466829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.58■■□□□ 1.53
COL16A1-207ENST00000466829 ANKRD30AQ9BXX3 1397 aa24.57■■□□□ 1.52
COL16A1-207ENST00000466829 FAM135AQ9P2D6 1515 aa24.57■■□□□ 1.52
COL16A1-207ENST00000466829 NCKAP5LQ9HCH0 1330 aa24.56■■□□□ 1.52
COL16A1-207ENST00000466829 NCOA1Q15788 1441 aa24.55■■□□□ 1.52
COL16A1-207ENST00000466829 PZPP20742 1482 aa24.55■■□□□ 1.52
COL16A1-207ENST00000466829 DNMT1P26358 1616 aaKnown RBP24.54■■□□□ 1.52
COL16A1-207ENST00000466829 CAMSAP1Q5T5Y3 1602 aa24.54■■□□□ 1.52
COL16A1-207ENST00000466829 CERKQ8TCT0 537 aa24.54■■□□□ 1.52
COL16A1-207ENST00000466829 STRCQ7RTU9 1775 aa24.54■■□□□ 1.52
COL16A1-207ENST00000466829 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
COL16A1-207ENST00000466829 CEP170BQ9Y4F5 1589 aaPredicted RBP24.52■■□□□ 1.52
COL16A1-207ENST00000466829 EIF2AK4Q9P2K8 1649 aaKnown RBP24.52■■□□□ 1.52
COL16A1-207ENST00000466829 PTPRTO14522 1441 aa24.52■■□□□ 1.52
COL16A1-207ENST00000466829 ERBINQ96RT1 1412 aa24.52■■□□□ 1.52
COL16A1-207ENST00000466829 CROCC2H7BZ55 1655 aa24.51■■□□□ 1.51
COL16A1-207ENST00000466829 RNF17Q9BXT8 1623 aaKnown RBP24.5■■□□□ 1.51
COL16A1-207ENST00000466829 PKD2Q13563 968 aa24.5■■□□□ 1.51
COL16A1-207ENST00000466829 A2ML1A8K2U0 1454 aa24.5■■□□□ 1.51
COL16A1-207ENST00000466829 ABCC3O15438 1527 aa24.5■■□□□ 1.51
COL16A1-207ENST00000466829 KANK1Q14678 1352 aa24.49■■□□□ 1.51
COL16A1-207ENST00000466829 THEMISQ8N1K5 641 aaPredicted RBP24.45■■□□□ 1.5
COL16A1-207ENST00000466829 ZNF142P52746 1687 aaPredicted RBP24.45■■□□□ 1.5
COL16A1-207ENST00000466829 ITGAEP38570 1179 aa24.44■■□□□ 1.5
COL16A1-207ENST00000466829 PLA2R1Q13018 1463 aa24.44■■□□□ 1.5
COL16A1-207ENST00000466829 ZC3H13Q5T200 1668 aaKnown RBP24.43■■□□□ 1.5
COL16A1-207ENST00000466829 NLRP1Q9C000 1473 aa24.42■■□□□ 1.5
COL16A1-207ENST00000466829 MROH1Q8NDA8 1641 aa24.42■■□□□ 1.5
COL16A1-207ENST00000466829 ANKLE2Q86XL3 938 aa24.4■■□□□ 1.5
COL16A1-207ENST00000466829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.4■■□□□ 1.5
COL16A1-207ENST00000466829 ADGRL2O95490 1459 aa24.38■■□□□ 1.49
COL16A1-207ENST00000466829 ERVK-7P63135 1459 aa24.38■■□□□ 1.49
COL16A1-207ENST00000466829 PRDM15P57071 1507 aaPredicted RBP24.37■■□□□ 1.49
COL16A1-207ENST00000466829 CEP152O94986 1710 aa24.37■■□□□ 1.49
COL16A1-207ENST00000466829 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
COL16A1-207ENST00000466829 ANKRD50Q9ULJ7 1429 aa24.36■■□□□ 1.49
COL16A1-207ENST00000466829 ZNF335Q9H4Z2 1342 aaPredicted RBP24.35■■□□□ 1.49
COL16A1-207ENST00000466829 SPATA31D1Q6ZQQ2 1576 aa24.34■■□□□ 1.49
COL16A1-207ENST00000466829 STAG3Q9UJ98 1225 aa24.33■■□□□ 1.49
COL16A1-207ENST00000466829 ARHGAP31Q2M1Z3 1444 aa24.33■■□□□ 1.49
COL16A1-207ENST00000466829 DEPDC5O75140 1603 aa24.3■■□□□ 1.48
COL16A1-207ENST00000466829 CFAP65Q6ZU64 1925 aaKnown RBP24.29■■□□□ 1.48
COL16A1-207ENST00000466829 ROCK1Q13464 1354 aa24.28■■□□□ 1.48
COL16A1-207ENST00000466829 LTBP4Q8N2S1 1624 aa24.26■■□□□ 1.47
COL16A1-207ENST00000466829 LMTK2Q8IWU2 1503 aa24.25■■□□□ 1.47
COL16A1-207ENST00000466829 NPHP4O75161 1426 aaPredicted RBP24.24■■□□□ 1.47
COL16A1-207ENST00000466829 EID1Q9Y6B2 187 aa24.23■■□□□ 1.47
COL16A1-207ENST00000466829 VWDEQ8N2E2 1590 aa24.22■■□□□ 1.47
COL16A1-207ENST00000466829 IDI1Q13907 227 aa24.22■■□□□ 1.47
COL16A1-207ENST00000466829 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
COL16A1-207ENST00000466829 POLR1AO95602 1720 aaPredicted RBP24.21■■□□□ 1.47
COL16A1-207ENST00000466829 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.46
COL16A1-207ENST00000466829 EFCAB6Q5THR3 1501 aa24.18■■□□□ 1.46
COL16A1-207ENST00000466829 UBAP1LF5GYI3 381 aa24.17■■□□□ 1.46
COL16A1-207ENST00000466829 SLC52A1Q9NWF4 448 aa24.17■■□□□ 1.46
COL16A1-207ENST00000466829 NUP155O75694 1391 aa24.16■■□□□ 1.46
COL16A1-207ENST00000466829 MED14O60244 1454 aa24.16■■□□□ 1.46
COL16A1-207ENST00000466829 LTKP29376 864 aa24.16■■□□□ 1.46
COL16A1-207ENST00000466829 IQSEC2Q5JU85 1478 aa24.15■■□□□ 1.46
COL16A1-207ENST00000466829 UBR1Q8IWV7 1749 aa24.15■■□□□ 1.46
COL16A1-207ENST00000466829 SCAF11Q99590 1463 aaKnown RBP24.14■■□□□ 1.46
COL16A1-207ENST00000466829 NOS1P29475 1434 aa24.14■■□□□ 1.45
COL16A1-207ENST00000466829 RRBP1Q9P2E9 1410 aaKnown RBP24.14■■□□□ 1.45
COL16A1-207ENST00000466829 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
COL16A1-207ENST00000466829 RPRD2Q5VT52 1461 aaKnown RBP24.13■■□□□ 1.45
COL16A1-207ENST00000466829 CHGAP10645 457 aaKnown RBP24.12■■□□□ 1.45
COL16A1-207ENST00000466829 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
COL16A1-207ENST00000466829 BCANQ96GW7 911 aa24.11■■□□□ 1.45
COL16A1-207ENST00000466829 TRIM26Q12899 539 aaPredicted RBP24.1■■□□□ 1.45
COL16A1-207ENST00000466829 UNC13BO14795 1591 aa24.1■■□□□ 1.45
COL16A1-207ENST00000466829 SYNMO15061 1565 aa24.1■■□□□ 1.45
COL16A1-207ENST00000466829 IQGAP1P46940 1657 aa24.1■■□□□ 1.45
COL16A1-207ENST00000466829 SLIT1O75093 1534 aa24.09■■□□□ 1.45
COL16A1-207ENST00000466829 CPS1P31327 1500 aa24.09■■□□□ 1.45
COL16A1-207ENST00000466829 TET3O43151 1660 aa24.08■■□□□ 1.45
COL16A1-207ENST00000466829 ARHGAP23Q9P227 1491 aa24.08■■□□□ 1.45
COL16A1-207ENST00000466829 SCAF1Q9H7N4 1312 aaKnown RBP24.08■■□□□ 1.44
COL16A1-207ENST00000466829 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
COL16A1-207ENST00000466829 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
COL16A1-207ENST00000466829 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
COL16A1-207ENST00000466829 TOM1O60784 492 aa24.04■■□□□ 1.44
COL16A1-207ENST00000466829 PIP4K2BP78356 416 aa24.03■■□□□ 1.44
COL16A1-207ENST00000466829 TRIM52Q96A61 297 aa24.03■■□□□ 1.44
COL16A1-207ENST00000466829 ADGRB3O60242 1522 aa24.02■■□□□ 1.44
COL16A1-207ENST00000466829 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
COL16A1-207ENST00000466829 SLC26A8Q96RN1 970 aa24.01■■□□□ 1.43
COL16A1-207ENST00000466829 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
COL16A1-207ENST00000466829 NAIPQ13075 1403 aa23.99■■□□□ 1.43
COL16A1-207ENST00000466829 KDM5AP29375 1690 aaKnown RBP23.99■■□□□ 1.43
COL16A1-207ENST00000466829 E9PCH4 1651 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms