RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
CNNM3-203ENST00000465224 KDM5CP41229 1560 aa13.47□□□□□ -0.25
CNNM3-203ENST00000465224 TSPY4P0CV99 314 aa13.46□□□□□ -0.25
CNNM3-203ENST00000465224 TSPY10P0CW01 314 aa13.46□□□□□ -0.25
CNNM3-203ENST00000465224 PTPRGP23470 1445 aa13.46□□□□□ -0.25
CNNM3-203ENST00000465224 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
CNNM3-203ENST00000465224 CARD11Q9BXL7 1154 aa13.45□□□□□ -0.26
CNNM3-203ENST00000465224 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
CNNM3-203ENST00000465224 SHANK2Q9UPX8 1470 aa13.45□□□□□ -0.26
CNNM3-203ENST00000465224 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
CNNM3-203ENST00000465224 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
CNNM3-203ENST00000465224 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
CNNM3-203ENST00000465224 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
CNNM3-203ENST00000465224 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
CNNM3-203ENST00000465224 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
CNNM3-203ENST00000465224 ZMYND15Q9H091 742 aa13.41□□□□□ -0.26
CNNM3-203ENST00000465224 KDM5DQ9BY66 1539 aa13.41□□□□□ -0.26
CNNM3-203ENST00000465224 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
CNNM3-203ENST00000465224 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
CNNM3-203ENST00000465224 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
CNNM3-203ENST00000465224 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
CNNM3-203ENST00000465224 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
CNNM3-203ENST00000465224 GLIPR1L2Q4G1C9 344 aa13.38□□□□□ -0.27
CNNM3-203ENST00000465224 ARHGEF5Q12774 1597 aa13.38□□□□□ -0.27
CNNM3-203ENST00000465224 CDC42BPBQ9Y5S2 1711 aa13.38□□□□□ -0.27
CNNM3-203ENST00000465224 SMG6Q86US8 1419 aaKnown RBP13.37□□□□□ -0.27
CNNM3-203ENST00000465224 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
CNNM3-203ENST00000465224 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
CNNM3-203ENST00000465224 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
CNNM3-203ENST00000465224 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
CNNM3-203ENST00000465224 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
CNNM3-203ENST00000465224 FAM135AQ9P2D6 1515 aa13.36□□□□□ -0.27
CNNM3-203ENST00000465224 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
CNNM3-203ENST00000465224 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
CNNM3-203ENST00000465224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.271e-8■□□□□ 9
CNNM3-203ENST00000465224 RTL5Q5HYW3 569 aaPredicted RBP13.34□□□□□ -0.27
CNNM3-203ENST00000465224 PREX2Q70Z35 1606 aa13.33□□□□□ -0.27
CNNM3-203ENST00000465224 A0A0U1RQG5 324 aaPredicted RBP13.33□□□□□ -0.28
CNNM3-203ENST00000465224 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
CNNM3-203ENST00000465224 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
CNNM3-203ENST00000465224 SYCP2Q9BX26 1530 aa13.32□□□□□ -0.28
CNNM3-203ENST00000465224 RNF123Q5XPI4 1314 aa13.32□□□□□ -0.28
CNNM3-203ENST00000465224 AEBP2Q6ZN18 517 aaPredicted RBP13.31□□□□□ -0.28
CNNM3-203ENST00000465224 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
CNNM3-203ENST00000465224 TTC37Q6PGP7 1564 aa13.31□□□□□ -0.28
CNNM3-203ENST00000465224 PDE4CQ08493 712 aa13.31□□□□□ -0.28
CNNM3-203ENST00000465224 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
CNNM3-203ENST00000465224 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
CNNM3-203ENST00000465224 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
CNNM3-203ENST00000465224 LRPPRCP42704 1394 aaKnown RBP13.3□□□□□ -0.28
CNNM3-203ENST00000465224 ARHGAP5Q13017 1502 aa13.3□□□□□ -0.28
CNNM3-203ENST00000465224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.3□□□□□ -0.28
CNNM3-203ENST00000465224 RALBP1Q15311 655 aa13.28□□□□□ -0.28
CNNM3-203ENST00000465224 PLEKHH2Q8IVE3 1493 aa13.28□□□□□ -0.28
CNNM3-203ENST00000465224 TRPM1Q7Z4N2 1603 aa13.28□□□□□ -0.28
CNNM3-203ENST00000465224 E9PCH4 1651 aa13.28□□□□□ -0.28
CNNM3-203ENST00000465224 BRD4O60885 1362 aaPredicted RBP13.28□□□□□ -0.28
CNNM3-203ENST00000465224 A2MP01023 1474 aa13.28□□□□□ -0.28
CNNM3-203ENST00000465224 PER1O15534 1290 aaPredicted RBP13.27□□□□□ -0.29
CNNM3-203ENST00000465224 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
CNNM3-203ENST00000465224 UNC13BO14795 1591 aa13.25□□□□□ -0.29
CNNM3-203ENST00000465224 UHRF1BP1LA0JNW5 1464 aa13.25□□□□□ -0.29
CNNM3-203ENST00000465224 TESK2Q96S53 571 aa13.25□□□□□ -0.29
CNNM3-203ENST00000465224 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
CNNM3-203ENST00000465224 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
CNNM3-203ENST00000465224 FGD1P98174 961 aa13.24□□□□□ -0.29
CNNM3-203ENST00000465224 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
CNNM3-203ENST00000465224 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
CNNM3-203ENST00000465224 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
CNNM3-203ENST00000465224 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
CNNM3-203ENST00000465224 WASHC2CQ9Y4E1 1318 aa13.23□□□□□ -0.29
CNNM3-203ENST00000465224 PDIA4P13667 645 aaKnown RBP13.23□□□□□ -0.29
CNNM3-203ENST00000465224 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
CNNM3-203ENST00000465224 NLRP13Q86W25 1043 aa13.23□□□□□ -0.29
CNNM3-203ENST00000465224 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
CNNM3-203ENST00000465224 IPO9Q96P70 1041 aaKnown RBP13.21□□□□□ -0.29
CNNM3-203ENST00000465224 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
CNNM3-203ENST00000465224 PANK3Q9H999 370 aa13.21□□□□□ -0.29
CNNM3-203ENST00000465224 MYO5CQ9NQX4 1742 aa13.2□□□□□ -0.3
CNNM3-203ENST00000465224 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
CNNM3-203ENST00000465224 COL17A1Q9UMD9 1497 aaPredicted RBP13.2□□□□□ -0.3
CNNM3-203ENST00000465224 PRDM15P57071 1507 aaPredicted RBP13.2□□□□□ -0.3
CNNM3-203ENST00000465224 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
CNNM3-203ENST00000465224 CDCA7LQ96GN5 454 aa13.19□□□□□ -0.3
CNNM3-203ENST00000465224 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
CNNM3-203ENST00000465224 AAMPQ13685 434 aa13.19□□□□□ -0.3
CNNM3-203ENST00000465224 ERBINQ96RT1 1412 aa13.19□□□□□ -0.3
CNNM3-203ENST00000465224 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
CNNM3-203ENST00000465224 PLCH2O75038 1416 aa13.18□□□□□ -0.3
CNNM3-203ENST00000465224 TRAPPC8Q9Y2L5 1435 aa13.18□□□□□ -0.3
CNNM3-203ENST00000465224 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
CNNM3-203ENST00000465224 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
CNNM3-203ENST00000465224 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
CNNM3-203ENST00000465224 ATP10AO60312 1499 aa13.17□□□□□ -0.3
CNNM3-203ENST00000465224 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
CNNM3-203ENST00000465224 MAGI2Q86UL8 1455 aa13.17□□□□□ -0.3
CNNM3-203ENST00000465224 LAMC1P11047 1609 aa13.16□□□□□ -0.3
CNNM3-203ENST00000465224 TMF1P82094 1093 aa13.16□□□□□ -0.3
CNNM3-203ENST00000465224 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
CNNM3-203ENST00000465224 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms