RNA–Protein interactions for RNA: ENST00000464612.5

SNHG12-204, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-204ENST00000464612 ERBINQ96RT1 1412 aa13.65□□□□□ -0.22
SNHG12-204ENST00000464612 EIF2AK4Q9P2K8 1649 aaKnown RBP13.65□□□□□ -0.22
SNHG12-204ENST00000464612 ROCK1Q13464 1354 aa13.65□□□□□ -0.22
SNHG12-204ENST00000464612 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
SNHG12-204ENST00000464612 RNF17Q9BXT8 1623 aaKnown RBP13.64□□□□□ -0.23
SNHG12-204ENST00000464612 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
SNHG12-204ENST00000464612 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
SNHG12-204ENST00000464612 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
SNHG12-204ENST00000464612 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
SNHG12-204ENST00000464612 DEPDC5O75140 1603 aa13.6□□□□□ -0.23
SNHG12-204ENST00000464612 KDM5DQ9BY66 1539 aa13.59□□□□□ -0.23
SNHG12-204ENST00000464612 CNTLNQ9NXG0 1405 aa13.59□□□□□ -0.23
SNHG12-204ENST00000464612 C3P01024 1663 aa13.59□□□□□ -0.23
SNHG12-204ENST00000464612 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
SNHG12-204ENST00000464612 NAIPQ13075 1403 aa13.58□□□□□ -0.24
SNHG12-204ENST00000464612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.247e-7■■□□□ 12.4
SNHG12-204ENST00000464612 ABCC3O15438 1527 aa13.58□□□□□ -0.24
SNHG12-204ENST00000464612 MROH2AA6NES4 1674 aa13.57□□□□□ -0.24
SNHG12-204ENST00000464612 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
SNHG12-204ENST00000464612 CEP152O94986 1710 aa13.57□□□□□ -0.24
SNHG12-204ENST00000464612 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
SNHG12-204ENST00000464612 ZMYM3Q14202 1370 aa13.57□□□□□ -0.24
SNHG12-204ENST00000464612 HFM1A2PYH4 1435 aa13.56□□□□□ -0.24
SNHG12-204ENST00000464612 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
SNHG12-204ENST00000464612 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
SNHG12-204ENST00000464612 ZC3H13Q5T200 1668 aaKnown RBP13.55□□□□□ -0.24
SNHG12-204ENST00000464612 UNC13BO14795 1591 aa13.54□□□□□ -0.24
SNHG12-204ENST00000464612 VWDEQ8N2E2 1590 aa13.54□□□□□ -0.24
SNHG12-204ENST00000464612 CAMSAP1Q5T5Y3 1602 aa13.53□□□□□ -0.24
SNHG12-204ENST00000464612 KANK1Q14678 1352 aa13.52□□□□□ -0.25
SNHG12-204ENST00000464612 PZPP20742 1482 aa13.51□□□□□ -0.25
SNHG12-204ENST00000464612 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
SNHG12-204ENST00000464612 LMTK2Q8IWU2 1503 aa13.5□□□□□ -0.25
SNHG12-204ENST00000464612 NUP155O75694 1391 aa13.49□□□□□ -0.25
SNHG12-204ENST00000464612 NPATQ14207 1427 aa13.48□□□□□ -0.25
SNHG12-204ENST00000464612 IQGAP3Q86VI3 1631 aa13.48□□□□□ -0.25
SNHG12-204ENST00000464612 EFCAB6Q5THR3 1501 aa13.48□□□□□ -0.25
SNHG12-204ENST00000464612 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
SNHG12-204ENST00000464612 PREX1Q8TCU6 1659 aa13.47□□□□□ -0.25
SNHG12-204ENST00000464612 ERVK-7P63135 1459 aa13.46□□□□□ -0.25
SNHG12-204ENST00000464612 TET3O43151 1660 aa13.46□□□□□ -0.26
SNHG12-204ENST00000464612 ARHGAP31Q2M1Z3 1444 aa13.46□□□□□ -0.26
SNHG12-204ENST00000464612 SETD5Q9C0A6 1442 aa13.46□□□□□ -0.26
SNHG12-204ENST00000464612 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.26
SNHG12-204ENST00000464612 SPATA31D1Q6ZQQ2 1576 aa13.45□□□□□ -0.26
SNHG12-204ENST00000464612 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
SNHG12-204ENST00000464612 TNRQ92752 1358 aa13.45□□□□□ -0.26
SNHG12-204ENST00000464612 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
SNHG12-204ENST00000464612 TRIM52Q96A61 297 aa13.44□□□□□ -0.26
SNHG12-204ENST00000464612 E9PCH4 1651 aa13.44□□□□□ -0.26
SNHG12-204ENST00000464612 CFAP65Q6ZU64 1925 aaKnown RBP13.43□□□□□ -0.26
SNHG12-204ENST00000464612 ADRA2BP18089 450 aa13.43□□□□□ -0.26
SNHG12-204ENST00000464612 HSPA2P54652 639 aa13.43□□□□□ -0.26
SNHG12-204ENST00000464612 SYNMO15061 1565 aa13.41□□□□□ -0.26
SNHG12-204ENST00000464612 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
SNHG12-204ENST00000464612 SETD1BQ9UPS6 1966 aaKnown RBP13.41□□□□□ -0.26
SNHG12-204ENST00000464612 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
SNHG12-204ENST00000464612 NOS1P29475 1434 aa13.4□□□□□ -0.26
SNHG12-204ENST00000464612 RPRD2Q5VT52 1461 aaKnown RBP13.4□□□□□ -0.26
SNHG12-204ENST00000464612 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
SNHG12-204ENST00000464612 A2ML1A8K2U0 1454 aa13.39□□□□□ -0.27
SNHG12-204ENST00000464612 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
SNHG12-204ENST00000464612 UGGT1Q9NYU2 1555 aa13.37□□□□□ -0.27
SNHG12-204ENST00000464612 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
SNHG12-204ENST00000464612 PKD2Q13563 968 aa13.36□□□□□ -0.27
SNHG12-204ENST00000464612 PIK3C2BO00750 1634 aa13.35□□□□□ -0.27
SNHG12-204ENST00000464612 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
SNHG12-204ENST00000464612 SPHKAPQ2M3C7 1700 aa13.35□□□□□ -0.27
SNHG12-204ENST00000464612 IDI1Q13907 227 aa13.34□□□□□ -0.27
SNHG12-204ENST00000464612 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.27
SNHG12-204ENST00000464612 PTPRTO14522 1441 aa13.33□□□□□ -0.28
SNHG12-204ENST00000464612 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
SNHG12-204ENST00000464612 STRCQ7RTU9 1775 aa13.31□□□□□ -0.28
SNHG12-204ENST00000464612 ADGRB3O60242 1522 aa13.31□□□□□ -0.28
SNHG12-204ENST00000464612 TRPM2O94759 1503 aa13.31□□□□□ -0.28
SNHG12-204ENST00000464612 HRCP23327 699 aa13.31□□□□□ -0.28
SNHG12-204ENST00000464612 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
SNHG12-204ENST00000464612 SLC52A1Q9NWF4 448 aa13.3□□□□□ -0.28
SNHG12-204ENST00000464612 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
SNHG12-204ENST00000464612 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
SNHG12-204ENST00000464612 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
SNHG12-204ENST00000464612 ACIN1Q9UKV3 1341 aaKnown RBP13.29□□□□□ -0.28
SNHG12-204ENST00000464612 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
SNHG12-204ENST00000464612 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
SNHG12-204ENST00000464612 MYO5BQ9ULV0 1848 aa13.27□□□□□ -0.28
SNHG12-204ENST00000464612 KDM5AP29375 1690 aaKnown RBP13.27□□□□□ -0.29
SNHG12-204ENST00000464612 NEURL4Q96JN8 1562 aa13.26□□□□□ -0.29
SNHG12-204ENST00000464612 PCGF6Q9BYE7 350 aa13.26□□□□□ -0.29
SNHG12-204ENST00000464612 ARHGAP23Q9P227 1491 aa13.26□□□□□ -0.29
SNHG12-204ENST00000464612 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
SNHG12-204ENST00000464612 SLIT1O75093 1534 aa13.25□□□□□ -0.29
SNHG12-204ENST00000464612 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
SNHG12-204ENST00000464612 LTKP29376 864 aa13.24□□□□□ -0.29
SNHG12-204ENST00000464612 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
SNHG12-204ENST00000464612 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
SNHG12-204ENST00000464612 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
SNHG12-204ENST00000464612 ZFYVE9O95405 1425 aa13.22□□□□□ -0.29
SNHG12-204ENST00000464612 TXNDC2Q86VQ3 553 aa13.22□□□□□ -0.29
SNHG12-204ENST00000464612 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
SNHG12-204ENST00000464612 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms