RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 MRS2Q9HD23 443 aa28.1■■■□□ 2.09
TUBGCP3-204ENST00000464139 DUOX2Q9NRD8 1548 aa28.09■■■□□ 2.09
TUBGCP3-204ENST00000464139 PLA2R1Q13018 1463 aa28.09■■■□□ 2.09
TUBGCP3-204ENST00000464139 TRAPPC8Q9Y2L5 1435 aa28.09■■■□□ 2.09
TUBGCP3-204ENST00000464139 RGL3Q3MIN7 710 aa28.09■■■□□ 2.09
TUBGCP3-204ENST00000464139 FAM9BQ8IZU0 186 aa28.08■■■□□ 2.09
TUBGCP3-204ENST00000464139 CNGB1Q14028 1251 aaPredicted RBP28.08■■■□□ 2.09
TUBGCP3-204ENST00000464139 ABCC1P33527 1531 aa28.07■■■□□ 2.08
TUBGCP3-204ENST00000464139 NEFLP07196 543 aa28.07■■■□□ 2.08
TUBGCP3-204ENST00000464139 IQGAP3Q86VI3 1631 aa28.06■■■□□ 2.08
TUBGCP3-204ENST00000464139 ST20-MTHFSA0A0A6YYL1 179 aa28.05■■■□□ 2.08
TUBGCP3-204ENST00000464139 DHX29Q7Z478 1369 aaKnown RBP28.05■■■□□ 2.08
TUBGCP3-204ENST00000464139 ERBINQ96RT1 1412 aa28.03■■■□□ 2.08
TUBGCP3-204ENST00000464139 ROCK2O75116 1388 aaKnown RBP28.03■■■□□ 2.08
TUBGCP3-204ENST00000464139 ARID4BQ4LE39 1312 aaPredicted RBP28.02■■■□□ 2.08
TUBGCP3-204ENST00000464139 AFAP1Q8N556 730 aa28.01■■■□□ 2.08
TUBGCP3-204ENST00000464139 PRAG1Q86YV5 1406 aa27.99■■■□□ 2.07
TUBGCP3-204ENST00000464139 SPAG9O60271 1321 aaKnown RBP27.98■■■□□ 2.07
TUBGCP3-204ENST00000464139 MAGI2Q86UL8 1455 aa27.98■■■□□ 2.07
TUBGCP3-204ENST00000464139 A2MP01023 1474 aa27.96■■■□□ 2.07
TUBGCP3-204ENST00000464139 WDR7Q9Y4E6 1490 aa27.96■■■□□ 2.07
TUBGCP3-204ENST00000464139 NBPF1Q3BBV0 1214 aa27.95■■■□□ 2.06
TUBGCP3-204ENST00000464139 TRPM1Q7Z4N2 1603 aa27.94■■■□□ 2.06
TUBGCP3-204ENST00000464139 ARAP3Q8WWN8 1544 aa27.91■■■□□ 2.06
TUBGCP3-204ENST00000464139 ATP10AO60312 1499 aa27.89■■■□□ 2.06
TUBGCP3-204ENST00000464139 ZFYVE16Q7Z3T8 1539 aa27.89■■■□□ 2.05
TUBGCP3-204ENST00000464139 RTEL1-TNFRSF6BF6WH68 1400 aa27.88■■■□□ 2.05
TUBGCP3-204ENST00000464139 FANCAO15360 1455 aa27.87■■■□□ 2.05
TUBGCP3-204ENST00000464139 ZBED9Q6R2W3 1325 aa27.84■■■□□ 2.05
TUBGCP3-204ENST00000464139 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
TUBGCP3-204ENST00000464139 TSHZ2Q9NRE2 1034 aa27.83■■■□□ 2.05
TUBGCP3-204ENST00000464139 ABCA9Q8IUA7 1624 aa27.83■■■□□ 2.05
TUBGCP3-204ENST00000464139 IRX6P78412 446 aaPredicted RBP27.82■■■□□ 2.04
TUBGCP3-204ENST00000464139 MYT1LQ9UL68 1186 aa27.82■■■□□ 2.04
TUBGCP3-204ENST00000464139 GPRASP1Q5JY77 1395 aa27.82■■■□□ 2.04
TUBGCP3-204ENST00000464139 ASXL2Q76L83 1435 aa27.81■■■□□ 2.04
TUBGCP3-204ENST00000464139 E9PCH4 1651 aa27.81■■■□□ 2.04
TUBGCP3-204ENST00000464139 SCAPERQ9BY12 1400 aa27.78■■■□□ 2.04
TUBGCP3-204ENST00000464139 ATP7AQ04656 1500 aa27.78■■■□□ 2.04
TUBGCP3-204ENST00000464139 ADGRL1O94910 1474 aa27.78■■■□□ 2.04
TUBGCP3-204ENST00000464139 INO80Q9ULG1 1556 aaPredicted RBP27.76■■■□□ 2.03
TUBGCP3-204ENST00000464139 PRDM15P57071 1507 aaPredicted RBP27.75■■■□□ 2.03
TUBGCP3-204ENST00000464139 EIF2AK4Q9P2K8 1649 aaKnown RBP27.75■■■□□ 2.03
TUBGCP3-204ENST00000464139 LAMC1P11047 1609 aa27.74■■■□□ 2.03
TUBGCP3-204ENST00000464139 KIF3BO15066 747 aa27.74■■■□□ 2.03
TUBGCP3-204ENST00000464139 TMC1Q8TDI8 760 aa27.74■■■□□ 2.03
TUBGCP3-204ENST00000464139 TESK2Q96S53 571 aa27.73■■■□□ 2.03
TUBGCP3-204ENST00000464139 DEPDC5O75140 1603 aa27.73■■■□□ 2.03
TUBGCP3-204ENST00000464139 PNISRQ8TF01 805 aaKnown RBP27.71■■■□□ 2.03
TUBGCP3-204ENST00000464139 DISP3Q9P2K9 1392 aa27.71■■■□□ 2.03
TUBGCP3-204ENST00000464139 TRPM2O94759 1503 aa27.7■■■□□ 2.03
TUBGCP3-204ENST00000464139 SENP3-EIF4A1A0A087X0R7 540 aa27.69■■■□□ 2.02
TUBGCP3-204ENST00000464139 SPHKAPQ2M3C7 1700 aa27.69■■■□□ 2.02
TUBGCP3-204ENST00000464139 KANK1Q14678 1352 aa27.68■■■□□ 2.02
TUBGCP3-204ENST00000464139 COL17A1Q9UMD9 1497 aaPredicted RBP27.68■■■□□ 2.02
TUBGCP3-204ENST00000464139 PTPRTO14522 1441 aa27.68■■■□□ 2.02
TUBGCP3-204ENST00000464139 NPM1P06748 294 aaKnown RBP eCLIP27.67■■■□□ 2.02
TUBGCP3-204ENST00000464139 RALBP1Q15311 655 aa27.67■■■□□ 2.02
TUBGCP3-204ENST00000464139 MYBBP1AQ9BQG0 1328 aaKnown RBP27.67■■■□□ 2.02
TUBGCP3-204ENST00000464139 TET3O43151 1660 aa27.66■■■□□ 2.02
TUBGCP3-204ENST00000464139 CLTCL1P53675 1640 aa27.66■■■□□ 2.02
TUBGCP3-204ENST00000464139 VWDEQ8N2E2 1590 aa27.64■■■□□ 2.01
TUBGCP3-204ENST00000464139 CEP152O94986 1710 aa27.64■■■□□ 2.01
TUBGCP3-204ENST00000464139 RNF17Q9BXT8 1623 aaKnown RBP27.63■■■□□ 2.01
TUBGCP3-204ENST00000464139 KTN1Q86UP2 1357 aaKnown RBP27.63■■■□□ 2.01
TUBGCP3-204ENST00000464139 MADDQ8WXG6 1647 aa27.63■■■□□ 2.01
TUBGCP3-204ENST00000464139 PER1O15534 1290 aaPredicted RBP27.63■■■□□ 2.01
TUBGCP3-204ENST00000464139 BRD4O60885 1362 aaPredicted RBP27.62■■■□□ 2.01
TUBGCP3-204ENST00000464139 TMF1P82094 1093 aa27.61■■■□□ 2.01
TUBGCP3-204ENST00000464139 MROH1Q8NDA8 1641 aa27.59■■■□□ 2.01
TUBGCP3-204ENST00000464139 KIDINS220Q9ULH0 1771 aa27.59■■■□□ 2.01
TUBGCP3-204ENST00000464139 PANK3Q9H999 370 aa27.58■■■□□ 2.01
TUBGCP3-204ENST00000464139 PARD3Q8TEW0 1356 aa27.57■■■□□ 2
TUBGCP3-204ENST00000464139 LRPPRCP42704 1394 aaKnown RBP27.55■■■□□ 2
TUBGCP3-204ENST00000464139 SMG6Q86US8 1419 aaKnown RBP27.55■■■□□ 2
TUBGCP3-204ENST00000464139 ZNF518AQ6AHZ1 1483 aa27.55■■■□□ 2
TUBGCP3-204ENST00000464139 CC2D1BQ5T0F9 858 aaKnown RBP27.55■■■□□ 2
TUBGCP3-204ENST00000464139 CD109Q6YHK3 1445 aa27.54■■■□□ 2
TUBGCP3-204ENST00000464139 UGGT1Q9NYU2 1555 aa27.54■■■□□ 2
TUBGCP3-204ENST00000464139 NLRP13Q86W25 1043 aa27.53■■■□□ 2
TUBGCP3-204ENST00000464139 ERICH6BQ5W0A0 696 aa27.52■■■□□ 2
TUBGCP3-204ENST00000464139 NUDCQ9Y266 331 aa27.52■■■□□ 2
TUBGCP3-204ENST00000464139 IQGAP1P46940 1657 aa27.52■■■□□ 2
TUBGCP3-204ENST00000464139 STAC3Q96MF2 364 aa27.51■■□□□ 1.99
TUBGCP3-204ENST00000464139 PPP4R2Q9NY27 417 aa27.49■■□□□ 1.99
TUBGCP3-204ENST00000464139 EFCAB6Q5THR3 1501 aa27.47■■□□□ 1.99
TUBGCP3-204ENST00000464139 WASHC2CQ9Y4E1 1318 aa27.47■■□□□ 1.99
TUBGCP3-204ENST00000464139 SCAF11Q99590 1463 aaKnown RBP27.47■■□□□ 1.99
TUBGCP3-204ENST00000464139 PPRC1Q5VV67 1664 aaKnown RBP27.45■■□□□ 1.99
TUBGCP3-204ENST00000464139 POGZQ7Z3K3 1410 aa27.45■■□□□ 1.99
TUBGCP3-204ENST00000464139 CFAP70Q5T0N1 1121 aa27.43■■□□□ 1.98
TUBGCP3-204ENST00000464139 ADGRF5Q8IZF2 1346 aa27.42■■□□□ 1.98
TUBGCP3-204ENST00000464139 GGT6Q6P531 493 aa27.42■■□□□ 1.98
TUBGCP3-204ENST00000464139 CFAP74Q9C0B2 1584 aa27.41■■□□□ 1.98
TUBGCP3-204ENST00000464139 KIF1BO60333 1816 aa27.41■■□□□ 1.98
TUBGCP3-204ENST00000464139 SALL2Q9Y467 1007 aaPredicted RBP27.41■■□□□ 1.98
TUBGCP3-204ENST00000464139 B4GALNT3Q6L9W6 998 aa27.39■■□□□ 1.98
TUBGCP3-204ENST00000464139 NEURL4Q96JN8 1562 aa27.39■■□□□ 1.98
TUBGCP3-204ENST00000464139 LMTK2Q8IWU2 1503 aa27.38■■□□□ 1.97
TUBGCP3-204ENST00000464139 FRMPD1Q5SYB0 1578 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms