RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 ITGAEP38570 1179 aa39.87■■■■□ 3.97
SURF1-203ENST00000463965 EIF2AK4Q9P2K8 1649 aaKnown RBP39.87■■■■□ 3.97
SURF1-203ENST00000463965 ZMYM3Q14202 1370 aa39.86■■■■□ 3.97
SURF1-203ENST00000463965 WASHC2CQ9Y4E1 1318 aa39.85■■■■□ 3.97
SURF1-203ENST00000463965 MROH2AA6NES4 1674 aa39.83■■■■□ 3.97
SURF1-203ENST00000463965 CLTCQ00610 1675 aaKnown RBP39.82■■■■□ 3.96
SURF1-203ENST00000463965 FAM135AQ9P2D6 1515 aa39.81■■■■□ 3.96
SURF1-203ENST00000463965 PTPRKQ15262 1439 aa39.81■■■■□ 3.96
SURF1-203ENST00000463965 C3P01024 1663 aa39.8■■■■□ 3.96
SURF1-203ENST00000463965 RNF17Q9BXT8 1623 aaKnown RBP39.78■■■■□ 3.96
SURF1-203ENST00000463965 KDM5DQ9BY66 1539 aa39.77■■■■□ 3.96
SURF1-203ENST00000463965 ROCK1Q13464 1354 aa39.77■■■■□ 3.96
SURF1-203ENST00000463965 SETD1BQ9UPS6 1966 aaKnown RBP39.72■■■■□ 3.95
SURF1-203ENST00000463965 ANKRD50Q9ULJ7 1429 aa39.71■■■■□ 3.95
SURF1-203ENST00000463965 NPATQ14207 1427 aa39.69■■■■□ 3.94
SURF1-203ENST00000463965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.69■■■■□ 3.94
SURF1-203ENST00000463965 KANK1Q14678 1352 aa39.68■■■■□ 3.94
SURF1-203ENST00000463965 LMTK3Q96Q04 1460 aa39.66■■■■□ 3.94
SURF1-203ENST00000463965 UHRF1BP1Q6BDS2 1440 aa39.65■■■■□ 3.94
SURF1-203ENST00000463965 MROH1Q8NDA8 1641 aa39.63■■■■□ 3.93
SURF1-203ENST00000463965 ABCC3O15438 1527 aa39.62■■■■□ 3.93
SURF1-203ENST00000463965 ZC3H13Q5T200 1668 aaKnown RBP39.62■■■■□ 3.93
SURF1-203ENST00000463965 PREX1Q8TCU6 1659 aa39.62■■■■□ 3.93
SURF1-203ENST00000463965 PRDM15P57071 1507 aaPredicted RBP39.6■■■■□ 3.93
SURF1-203ENST00000463965 PZPP20742 1482 aa39.58■■■■□ 3.93
SURF1-203ENST00000463965 DEPDC5O75140 1603 aa39.58■■■■□ 3.93
SURF1-203ENST00000463965 HSPA2P54652 639 aa39.53■■■■□ 3.92
SURF1-203ENST00000463965 FBXO31Q5XUX0 539 aaPredicted RBP39.53■■■■□ 3.92
SURF1-203ENST00000463965 CEP152O94986 1710 aa39.5■■■■□ 3.91
SURF1-203ENST00000463965 TNRQ92752 1358 aa39.48■■■■□ 3.91
SURF1-203ENST00000463965 CAMSAP1Q5T5Y3 1602 aa39.45■■■■□ 3.91
SURF1-203ENST00000463965 VWDEQ8N2E2 1590 aa39.43■■■■□ 3.9
SURF1-203ENST00000463965 ARHGAP31Q2M1Z3 1444 aa39.43■■■■□ 3.9
SURF1-203ENST00000463965 LMTK2Q8IWU2 1503 aa39.42■■■■□ 3.9
SURF1-203ENST00000463965 MYO3AQ8NEV4 1616 aa39.38■■■■□ 3.89
SURF1-203ENST00000463965 NAIPQ13075 1403 aa39.38■■■■□ 3.89
SURF1-203ENST00000463965 UNC13BO14795 1591 aa39.37■■■■□ 3.89
SURF1-203ENST00000463965 ERVK-7P63135 1459 aa39.36■■■■□ 3.89
SURF1-203ENST00000463965 HFM1A2PYH4 1435 aa39.35■■■■□ 3.89
SURF1-203ENST00000463965 NUP155O75694 1391 aa39.33■■■■□ 3.89
SURF1-203ENST00000463965 SPATA31D1Q6ZQQ2 1576 aa39.33■■■■□ 3.89
SURF1-203ENST00000463965 CEP170BQ9Y4F5 1589 aaPredicted RBP39.32■■■■□ 3.88
SURF1-203ENST00000463965 A2ML1A8K2U0 1454 aa39.31■■■■□ 3.88
SURF1-203ENST00000463965 NLRP1Q9C000 1473 aa39.31■■■■□ 3.88
SURF1-203ENST00000463965 CFAP65Q6ZU64 1925 aaKnown RBP39.3■■■■□ 3.88
SURF1-203ENST00000463965 ZNF142P52746 1687 aaPredicted RBP39.29■■■■□ 3.88
SURF1-203ENST00000463965 GCC2Q8IWJ2 1684 aa39.29■■■■□ 3.88
SURF1-203ENST00000463965 EFCAB6Q5THR3 1501 aa39.28■■■■□ 3.88
SURF1-203ENST00000463965 TET3O43151 1660 aa39.23■■■■□ 3.87
SURF1-203ENST00000463965 DMRT2Q9Y5R5 561 aa39.23■■■■□ 3.87
SURF1-203ENST00000463965 RPRD2Q5VT52 1461 aaKnown RBP39.23■■■■□ 3.87
SURF1-203ENST00000463965 IQGAP3Q86VI3 1631 aa39.22■■■■□ 3.87
SURF1-203ENST00000463965 THEMISQ8N1K5 641 aaPredicted RBP39.21■■■■□ 3.87
SURF1-203ENST00000463965 TRIM52Q96A61 297 aa39.17■■■■□ 3.86
SURF1-203ENST00000463965 UGGT1Q9NYU2 1555 aa39.16■■■■□ 3.86
SURF1-203ENST00000463965 PLA2R1Q13018 1463 aa39.15■■■■□ 3.86
SURF1-203ENST00000463965 NOS1P29475 1434 aa39.14■■■■□ 3.86
SURF1-203ENST00000463965 PKD2Q13563 968 aa39.13■■■■□ 3.85
SURF1-203ENST00000463965 SLC52A1Q9NWF4 448 aa39.11■■■■□ 3.85
SURF1-203ENST00000463965 STRCQ7RTU9 1775 aa39.1■■■■□ 3.85
SURF1-203ENST00000463965 STAG3Q9UJ98 1225 aa39.1■■■■□ 3.85
SURF1-203ENST00000463965 NCKAP5LQ9HCH0 1330 aa39.08■■■■□ 3.85
SURF1-203ENST00000463965 ACIN1Q9UKV3 1341 aaKnown RBP39.08■■■■□ 3.85
SURF1-203ENST00000463965 IDI1Q13907 227 aa39.06■■■■□ 3.84
SURF1-203ENST00000463965 E9PCH4 1651 aa39.04■■■■□ 3.84
SURF1-203ENST00000463965 ANKLE2Q86XL3 938 aa39.04■■■■□ 3.84
SURF1-203ENST00000463965 PTPRTO14522 1441 aa39.04■■■■□ 3.84
SURF1-203ENST00000463965 SETD5Q9C0A6 1442 aa39.04■■■■□ 3.84
SURF1-203ENST00000463965 SYNMO15061 1565 aa39.04■■■■□ 3.84
SURF1-203ENST00000463965 SLC4A1APQ9BWU0 796 aaKnown RBP38.99■■■■□ 3.83
SURF1-203ENST00000463965 UBR1Q8IWV7 1749 aa38.97■■■■□ 3.83
SURF1-203ENST00000463965 PIK3C2BO00750 1634 aa38.96■■■■□ 3.83
SURF1-203ENST00000463965 EID1Q9Y6B2 187 aa38.9■■■■□ 3.82
SURF1-203ENST00000463965 KDM5AP29375 1690 aaKnown RBP38.89■■■■□ 3.82
SURF1-203ENST00000463965 ILDR1Q86SU0 546 aaPredicted RBP38.88■■■■□ 3.81
SURF1-203ENST00000463965 RAB3GAP2Q9H2M9 1393 aa38.87■■■■□ 3.81
SURF1-203ENST00000463965 ADGRB3O60242 1522 aa38.87■■■■□ 3.81
SURF1-203ENST00000463965 POLR1AO95602 1720 aaPredicted RBP38.86■■■■□ 3.81
SURF1-203ENST00000463965 CHGAP10645 457 aaKnown RBP38.86■■■■□ 3.81
SURF1-203ENST00000463965 TXNDC2Q86VQ3 553 aa38.86■■■■□ 3.81
SURF1-203ENST00000463965 TMEM2Q9UHN6 1383 aa38.85■■■■□ 3.81
SURF1-203ENST00000463965 SLIT1O75093 1534 aa38.84■■■■□ 3.81
SURF1-203ENST00000463965 MPHOSPH9Q99550 1183 aa38.83■■■■□ 3.81
SURF1-203ENST00000463965 ARHGAP23Q9P227 1491 aa38.83■■■■□ 3.81
SURF1-203ENST00000463965 SPHKAPQ2M3C7 1700 aa38.82■■■■□ 3.8
SURF1-203ENST00000463965 NPHP4O75161 1426 aaPredicted RBP38.8■■■■□ 3.8
SURF1-203ENST00000463965 SCAF11Q99590 1463 aaKnown RBP38.8■■■■□ 3.8
SURF1-203ENST00000463965 MED14O60244 1454 aa38.79■■■■□ 3.8
SURF1-203ENST00000463965 NEURL4Q96JN8 1562 aa38.79■■■■□ 3.8
SURF1-203ENST00000463965 HDGFP51858 240 aaKnown RBP38.79■■■■□ 3.8
SURF1-203ENST00000463965 HRCP23327 699 aa38.78■■■■□ 3.8
SURF1-203ENST00000463965 LTKP29376 864 aa38.78■■■■□ 3.8
SURF1-203ENST00000463965 TMEM131LA2VDJ0 1609 aa38.74■■■■□ 3.79
SURF1-203ENST00000463965 TRPM2O94759 1503 aa38.73■■■■□ 3.79
SURF1-203ENST00000463965 FOXD1Q16676 465 aa38.7■■■■□ 3.79
SURF1-203ENST00000463965 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.69■■■■□ 3.78
SURF1-203ENST00000463965 IQGAP1P46940 1657 aa38.68■■■■□ 3.78
SURF1-203ENST00000463965 RIMS2Q9UQ26 1411 aa38.67■■■■□ 3.78
SURF1-203ENST00000463965 PPP1R15AO75807 674 aaPredicted RBP38.67■■■■□ 3.78
SURF1-203ENST00000463965 ZNF335Q9H4Z2 1342 aaPredicted RBP38.65■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms