RNA–Protein interactions for RNA: ENST00000462904.1

SP3-204, Transcript of Sp3 transcription factor, humanhuman

TSL 4

Gene SP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-204ENST00000462904 CDC42BPAQ5VT25 1732 aa17.38■□□□□ 0.37
SP3-204ENST00000462904 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
SP3-204ENST00000462904 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
SP3-204ENST00000462904 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
SP3-204ENST00000462904 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
SP3-204ENST00000462904 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
SP3-204ENST00000462904 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
SP3-204ENST00000462904 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
SP3-204ENST00000462904 POTEAQ6S8J7 498 aa17.34■□□□□ 0.37
SP3-204ENST00000462904 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
SP3-204ENST00000462904 MED14O60244 1454 aa17.33■□□□□ 0.37
SP3-204ENST00000462904 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.37
SP3-204ENST00000462904 KIAA1107Q9UPP5 1409 aa17.33■□□□□ 0.36
SP3-204ENST00000462904 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
SP3-204ENST00000462904 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
SP3-204ENST00000462904 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
SP3-204ENST00000462904 DEPDC5O75140 1603 aa17.31■□□□□ 0.36
SP3-204ENST00000462904 SYNMO15061 1565 aa17.31■□□□□ 0.36
SP3-204ENST00000462904 PZPP20742 1482 aa17.31■□□□□ 0.36
SP3-204ENST00000462904 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
SP3-204ENST00000462904 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
SP3-204ENST00000462904 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
SP3-204ENST00000462904 NLRP1Q9C000 1473 aa17.29■□□□□ 0.36
SP3-204ENST00000462904 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
SP3-204ENST00000462904 MIA2Q96PC5 1412 aa17.27■□□□□ 0.35
SP3-204ENST00000462904 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
SP3-204ENST00000462904 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
SP3-204ENST00000462904 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
SP3-204ENST00000462904 KIF3BO15066 747 aa17.25■□□□□ 0.35
SP3-204ENST00000462904 CCNB3Q8WWL7 1395 aa17.25■□□□□ 0.35
SP3-204ENST00000462904 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
SP3-204ENST00000462904 SETD1AO15047 1707 aaKnown RBP17.22■□□□□ 0.35
SP3-204ENST00000462904 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
SP3-204ENST00000462904 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
SP3-204ENST00000462904 FYCO1Q9BQS8 1478 aa17.18■□□□□ 0.34
SP3-204ENST00000462904 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
SP3-204ENST00000462904 MBD5Q9P267 1494 aa17.15■□□□□ 0.34
SP3-204ENST00000462904 UPF1Q92900 1129 aaKnown RBP eCLIP17.14■□□□□ 0.33
SP3-204ENST00000462904 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
SP3-204ENST00000462904 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
SP3-204ENST00000462904 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
SP3-204ENST00000462904 SRCAPQ6ZRS2 3230 aa17.1■□□□□ 0.33
SP3-204ENST00000462904 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
SP3-204ENST00000462904 TXNDC2Q86VQ3 553 aa17.09■□□□□ 0.33
SP3-204ENST00000462904 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
SP3-204ENST00000462904 ERVK-7P63135 1459 aa17.08■□□□□ 0.32
SP3-204ENST00000462904 TMEM94Q12767 1356 aa17.08■□□□□ 0.32
SP3-204ENST00000462904 TRIM52Q96A61 297 aa17.08■□□□□ 0.32
SP3-204ENST00000462904 CCDC141Q6ZP82 1450 aa17.07■□□□□ 0.32
SP3-204ENST00000462904 LTKP29376 864 aa17.07■□□□□ 0.32
SP3-204ENST00000462904 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
SP3-204ENST00000462904 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
SP3-204ENST00000462904 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
SP3-204ENST00000462904 JCADQ9P266 1359 aa17.06■□□□□ 0.32
SP3-204ENST00000462904 ABCC3O15438 1527 aa17.05■□□□□ 0.32
SP3-204ENST00000462904 MEX3CQ5U5Q3 659 aaKnown RBP17.04■□□□□ 0.32
SP3-204ENST00000462904 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
SP3-204ENST00000462904 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
SP3-204ENST00000462904 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
SP3-204ENST00000462904 ARHGAP23Q9P227 1491 aa17.03■□□□□ 0.32
SP3-204ENST00000462904 SLIT1O75093 1534 aa17.02■□□□□ 0.32
SP3-204ENST00000462904 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
SP3-204ENST00000462904 PROSER2Q86WR7 435 aaPredicted RBP17.02■□□□□ 0.32
SP3-204ENST00000462904 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
SP3-204ENST00000462904 KCNA6P17658 529 aa17■□□□□ 0.31
SP3-204ENST00000462904 POTEDQ86YR6 584 aa17■□□□□ 0.31
SP3-204ENST00000462904 MAP3K1Q13233 1512 aa17■□□□□ 0.31
SP3-204ENST00000462904 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
SP3-204ENST00000462904 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
SP3-204ENST00000462904 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
SP3-204ENST00000462904 MSH6P52701 1360 aa16.99■□□□□ 0.31
SP3-204ENST00000462904 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
SP3-204ENST00000462904 SPATA31A6Q5VVP1 1343 aa16.97■□□□□ 0.31
SP3-204ENST00000462904 EHBP1L1Q8N3D4 1523 aa16.97■□□□□ 0.31
SP3-204ENST00000462904 RXRBP28702 533 aa16.97■□□□□ 0.31
SP3-204ENST00000462904 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
SP3-204ENST00000462904 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
SP3-204ENST00000462904 LRP6O75581 1613 aa16.96■□□□□ 0.31
SP3-204ENST00000462904 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
SP3-204ENST00000462904 TMEM2Q9UHN6 1383 aa16.96■□□□□ 0.31
SP3-204ENST00000462904 PRDM15P57071 1507 aaPredicted RBP16.96■□□□□ 0.3
SP3-204ENST00000462904 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
SP3-204ENST00000462904 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
SP3-204ENST00000462904 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
SP3-204ENST00000462904 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
SP3-204ENST00000462904 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
SP3-204ENST00000462904 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
SP3-204ENST00000462904 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
SP3-204ENST00000462904 CEP152O94986 1710 aa16.9■□□□□ 0.3
SP3-204ENST00000462904 ARHGEF5Q12774 1597 aa16.9■□□□□ 0.3
SP3-204ENST00000462904 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
SP3-204ENST00000462904 MROH1Q8NDA8 1641 aa16.89■□□□□ 0.29
SP3-204ENST00000462904 BCANQ96GW7 911 aa16.89■□□□□ 0.29
SP3-204ENST00000462904 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
SP3-204ENST00000462904 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
SP3-204ENST00000462904 EFCAB6Q5THR3 1501 aa16.87■□□□□ 0.29
SP3-204ENST00000462904 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
SP3-204ENST00000462904 TET3O43151 1660 aa16.85■□□□□ 0.29
SP3-204ENST00000462904 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
SP3-204ENST00000462904 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms